RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 SLC2A11Q9BYW1 496 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 SRMSQ9H3Y6 488 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 TM9SF3Q9HD45 589 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 PRSS16Q9NQE7 514 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 TAS2R16Q9NYV7 291 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 GULP1Q9UBP9 304 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 GVINP1Q7Z2Y8 2422 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 PSMD11O00231 422 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 UGT2B17O75795 530 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 CCNB2O95067 398 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 HTR1BP28222 390 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 SLC6A12P48065 614 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 TUBA4AP68366 448 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 CDK5R2Q13319 367 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 SLC9A5Q14940 896 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 TEAD4Q15561 434 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 DCST1Q5T197 706 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 KIAA1614Q5VZ46 1190 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 CPZQ66K79 652 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 SPRED1Q7Z699 444 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 CRIPAKQ8N1N5 446 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 SVOPQ8N4V2 548 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 OR9Q1Q8NGQ5 310 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 ALPK1Q96QP1 1244 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 GORASP2Q9H8Y8 452 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 TEX10Q9NXF1 929 aaPredicted RBP10.8□□□□□ -0.68
TOP3A-217ENST00000584582 ETAA1Q9NY74 926 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 CORO2BQ9UQ03 480 aa10.8□□□□□ -0.68
TOP3A-217ENST00000584582 M0R3H8 397 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 PCDH17O14917 1159 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 SLC16A5O15375 505 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 ITGB7P26010 798 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 DAPP51397 102 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 CTU2Q2VPK5 515 aaKnown RBP10.79□□□□□ -0.68
TOP3A-217ENST00000584582 C6orf120Q7Z4R8 191 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 ZZZ3Q8IYH5 903 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 SPARTQ8N0X7 666 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 IQCF1Q8N6M8 205 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 MCFD2Q8NI22 146 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 MRGPRX3Q96LB0 322 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 MAGEB10Q96LZ2 347 aaPredicted RBP10.79□□□□□ -0.68
TOP3A-217ENST00000584582 DOHHQ9BU89 302 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 RLIMQ9NVW2 624 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 GIN1Q9NXP7 522 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 NDOR1Q9UHB4 597 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 DOCK4Q8N1I0 1966 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 LINC01565O15544 149 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 AIREO43918 545 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 KDM1AO60341 852 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 ITGA2P17301 1181 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 TGFBR1P36897 503 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 TAS2R41P59536 307 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 SLAMF1Q13291 335 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 GPR68Q15743 365 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 NNATQ16517 81 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 TOR1AIP1Q5JTV8 583 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 PARM1Q6UWI2 310 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 TMEM107Q6UX40 140 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 PRR23BQ6ZRT6 265 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 METTL27Q8N6F8 245 aaPredicted RBP10.79□□□□□ -0.68
TOP3A-217ENST00000584582 ADAMTS15Q8TE58 950 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 RGMAQ96B86 450 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 DTNBP1Q96EV8 351 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 ZBED6CLQ96FA7 236 aaPredicted RBP10.79□□□□□ -0.68
TOP3A-217ENST00000584582 TMEM19Q96HH6 336 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 SLC35G5Q96KT7 338 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 EHD1Q9H4M9 534 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 IL1RAPQ9NPH3 570 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 H2AFY2Q9P0M6 372 aaPredicted RBP10.79□□□□□ -0.68
TOP3A-217ENST00000584582 ZNF780BQ9Y6R6 833 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 PCM1Q15154 2024 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 XIRP2A4UGR9 3374 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 ANHXE9PGG2 379 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 SERPINB7O75635 380 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 SRPRAP08240 638 aaKnown RBP10.79□□□□□ -0.68
TOP3A-217ENST00000584582 ZFP36L2P47974 494 aaKnown RBP10.79□□□□□ -0.68
TOP3A-217ENST00000584582 CCR4P51679 360 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 SIM1P81133 766 aaPredicted RBP10.79□□□□□ -0.68
TOP3A-217ENST00000584582 ITPRIPL2Q3MIP1 535 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 PNCKQ6P2M8 343 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 OOSP2Q86WS3 158 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.79□□□□□ -0.68
TOP3A-217ENST00000584582 LRIG1Q96JA1 1093 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 ZNF607Q96SK3 696 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 KCNS3Q9BQ31 491 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 POLR2J3Q9H1A7 115 aaKnown RBP10.79□□□□□ -0.68
TOP3A-217ENST00000584582 SERHLQ9NQF3 203 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 SLC9A8Q9Y2E8 581 aa10.79□□□□□ -0.68
TOP3A-217ENST00000584582 SCN2AQ99250 2005 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 SLC5A10A0PJK1 596 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 KMOO15229 486 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 PSIP1O75475 530 aaKnown RBP10.78□□□□□ -0.68
TOP3A-217ENST00000584582 BMP10O95393 424 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 ASGR2P07307 311 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 RETP07949 1114 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 NT5EP21589 574 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 CRHBPP24387 322 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 UGT2B15P54855 530 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 TOP3AQ13472 1001 aaPredicted RBP10.78□□□□□ -0.68
TOP3A-217ENST00000584582 SHHQ15465 462 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms