RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	STAP1	Q9ULZ2	295 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	GUCA1B	Q9UMX6	200 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	ICK	Q9UPZ9	632 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	ERVK-11	Q9UQG0	969 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	FRMD4B	Q9Y2L6	1034 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	YARS2	Q9Y2Z4	477 aa	Known RBP	4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	SNX8	Q9Y5X2	465 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	IKBKG	Q9Y6K9	419 aa		4.4	□□□□□ -1.71
MSI2-216	ENST00000582772	PVALEF	A0A1B0GWK0	134 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	BICDL2	A1A5D9	508 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	LRRC3C	A6NJW4	275 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	POLR3G	O15318	223 aa	Predicted RBP	4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	ATP8B1	O43520	1251 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	SLITRK5	O94991	958 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	CLDN7	O95471	211 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	SFTPB	P07988	381 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	RHOXF2B	P0C7M4	288 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	CPN1	P15169	458 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	CTPS1	P17812	591 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	LMO1	P25800	156 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	ARNT	P27540	789 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	PEBP1	P30086	187 aa	Known RBP	4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	SHMT2	P34897	504 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	PCGF2	P35227	344 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	KCNJ5	P48544	419 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	DNASE1L1	P49184	302 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	C21orf58	P58505	322 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	KRTAP10-11	P60412	298 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	DEUP1	Q05D60	604 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	PDCL	Q13371	301 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	CUL2	Q13617	745 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	KRT81	Q14533	505 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	BRD3	Q15059	726 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	TSC22D1	Q15714	1073 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	WHAMMP3	Q1A5X7	153 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	ASTE1	Q2TB18	679 aa	Predicted RBP	4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	DCST1	Q5T197	706 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	ARMC12	Q5T9G4	340 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	TAF3	Q5VWG9	929 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	OR2A2	Q6IF42	318 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	RWDD4	Q6NW29	188 aa	Known RBP	4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	DPY19L2P1	Q6NXN4	242 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	FAHD2B	Q6P2I3	314 aa	Predicted RBP	4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	PGBD2	Q6P3X8	592 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	OLFML1	Q6UWY5	402 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	RTL4	Q6ZR62	310 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	ZNF662	Q6ZS27	426 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	FAM47E	Q6ZV65	393 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	PHLDB2	Q86SQ0	1253 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	NT5DC3	Q86UY8	548 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	CEP112	Q8N8E3	955 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	PLPP5	Q8NEB5	264 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	LINC01006	Q8NI28	216 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	LMO3	Q8TAP4	145 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	BRSK1	Q8TDC3	778 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	ZBTB9	Q96C00	473 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	FAHD2A	Q96GK7	314 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	RADIL	Q96JH8	1075 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	PKNOX2	Q96KN3	472 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	SGCZ	Q96LD1	299 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	RCHY1	Q96PM5	261 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	NUDCD1	Q96RS6	583 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	DHRS9	Q9BPW9	319 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	TUBA1C	Q9BQE3	449 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	RHOXF2	Q9BQY4	288 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	CCM2	Q9BSQ5	444 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	G6PC3	Q9BUM1	346 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	UGT2B28	Q9BY64	529 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	KLHL4	Q9C0H6	718 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	ACTR6	Q9GZN1	396 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	LRRC19	Q9H756	370 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	MVB12B	Q9H7P6	319 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	ZFP64	Q9NPA5	681 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	SEMA4B	Q9NPR2	832 aa	Predicted RBP	4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	SACM1L	Q9NTJ5	587 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	PANK4	Q9NVE7	773 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	TAS2R16	Q9NYV7	291 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	MYO6	Q9UM54	1294 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	ZNF711	Q9Y462	761 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	LRP1B	Q9NZR2	4599 aa		4.39	□□□□□ -1.71
MSI2-216	ENST00000582772	CTAGE15	A4D2H0	777 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	CCDC151	A5D8V7	595 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	FAM181B	A6NEQ2	426 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	MGAT4D	A6NG13	374 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	MAGEB17	A8MXT2	336 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772		G3V3Y1	287 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	MYO1F	O00160	1098 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	SMAP	O00193	183 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	EMC8	O43402	210 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	HCRTR2	O43614	444 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	ANGPTL7	O43827	346 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	MTX2	O75431	263 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	STAMBP	O95630	424 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	GBA	P04062	536 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	HPN	P05981	417 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	MMP2	P08253	660 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	ANXA5	P08758	320 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	CTAGE8	P0CG41	777 aa		4.38	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms