RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 FAAH2Q6GMR7 532 aa12.03□□□□□ -0.48
TRAPPC1-206ENST00000573989 TMEM205Q6UW68 189 aa12.03□□□□□ -0.48
TRAPPC1-206ENST00000573989 KIRREL2Q6UWL6 708 aa12.03□□□□□ -0.48
TRAPPC1-206ENST00000573989 NDUFAF7Q7L592 441 aa12.03□□□□□ -0.48
TRAPPC1-206ENST00000573989 UBE3DQ7Z6J8 389 aa12.03□□□□□ -0.48
TRAPPC1-206ENST00000573989 CUZD1Q86UP6 607 aa12.03□□□□□ -0.48
TRAPPC1-206ENST00000573989 KIRREL3Q8IZU9 778 aa12.03□□□□□ -0.48
TRAPPC1-206ENST00000573989 TTC9Q92623 222 aa12.03□□□□□ -0.48
TRAPPC1-206ENST00000573989 TLCD1Q96CP7 247 aa12.03□□□□□ -0.48
TRAPPC1-206ENST00000573989 PTCHD1Q96NR3 888 aa12.03□□□□□ -0.48
TRAPPC1-206ENST00000573989 PAIP2Q9BPZ3 127 aaKnown RBP12.03□□□□□ -0.48
TRAPPC1-206ENST00000573989 RBCK1Q9BYM8 510 aa12.03□□□□□ -0.48
TRAPPC1-206ENST00000573989 DDX31Q9H8H2 851 aaKnown RBP12.03□□□□□ -0.48
TRAPPC1-206ENST00000573989 ATP13A2Q9NQ11 1180 aa12.03□□□□□ -0.48
TRAPPC1-206ENST00000573989 PRDM9Q9NQV7 894 aa12.03□□□□□ -0.48
TRAPPC1-206ENST00000573989 VPS29Q9UBQ0 182 aa12.03□□□□□ -0.48
TRAPPC1-206ENST00000573989 TUBD1Q9UJT1 453 aa12.03□□□□□ -0.48
TRAPPC1-206ENST00000573989 FBXW2Q9UKT8 454 aa12.03□□□□□ -0.48
TRAPPC1-206ENST00000573989 TIMM22Q9Y584 194 aa12.03□□□□□ -0.48
TRAPPC1-206ENST00000573989 MED13Q9UHV7 2174 aa12.03□□□□□ -0.48
TRAPPC1-206ENST00000573989 NSG1A0A0A6YYJ2 146 aa12.02□□□□□ -0.49
TRAPPC1-206ENST00000573989 TMEM120BA0PK00 339 aa12.02□□□□□ -0.49
TRAPPC1-206ENST00000573989 SERTM1A2A2V5 107 aa12.02□□□□□ -0.49
TRAPPC1-206ENST00000573989 UBFD1O14562 309 aaKnown RBP12.02□□□□□ -0.49
TRAPPC1-206ENST00000573989 AZIN1O14977 448 aa12.02□□□□□ -0.49
TRAPPC1-206ENST00000573989 ETHE1O95571 254 aa12.02□□□□□ -0.49
TRAPPC1-206ENST00000573989 HPP00738 406 aa12.02□□□□□ -0.49
TRAPPC1-206ENST00000573989 ICAM2P13598 275 aa12.02□□□□□ -0.49
TRAPPC1-206ENST00000573989 CPN2P22792 545 aa12.02□□□□□ -0.49
TRAPPC1-206ENST00000573989 GRK2P25098 689 aa12.02□□□□□ -0.49
TRAPPC1-206ENST00000573989 BSGP35613 385 aa12.02□□□□□ -0.49
TRAPPC1-206ENST00000573989 RHAGQ02094 409 aa12.02□□□□□ -0.49
TRAPPC1-206ENST00000573989 ACTN3Q08043 901 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC1-206ENST00000573989 AIMP2Q13155 320 aaKnown RBP12.02□□□□□ -0.49
TRAPPC1-206ENST00000573989 ABRAXAS2Q15018 415 aa12.02□□□□□ -0.49
TRAPPC1-206ENST00000573989 IMPG1Q17R60 797 aa12.02□□□□□ -0.49
TRAPPC1-206ENST00000573989 SPIN4Q56A73 249 aa12.02□□□□□ -0.49
TRAPPC1-206ENST00000573989 ZNF793Q6ZN11 406 aa12.02□□□□□ -0.49
TRAPPC1-206ENST00000573989 CPEB2Q7Z5Q1 589 aaKnown RBP12.02□□□□□ -0.49
TRAPPC1-206ENST00000573989 GPR180Q86V85 440 aa12.02□□□□□ -0.49
TRAPPC1-206ENST00000573989 EFCAB3Q8N7B9 438 aa12.02□□□□□ -0.49
TRAPPC1-206ENST00000573989 ANKRD42Q8N9B4 389 aa12.02□□□□□ -0.49
TRAPPC1-206ENST00000573989 OR11G2Q8NGC1 345 aa12.02□□□□□ -0.49
TRAPPC1-206ENST00000573989 ATP6V1G3Q96LB4 118 aa12.02□□□□□ -0.49
TRAPPC1-206ENST00000573989 KCNA7Q96RP8 456 aa12.02□□□□□ -0.49
TRAPPC1-206ENST00000573989 TUBB6Q9BUF5 446 aa12.02□□□□□ -0.49
TRAPPC1-206ENST00000573989 WDR41Q9HAD4 459 aa12.02□□□□□ -0.49
TRAPPC1-206ENST00000573989 PFDN4Q9NQP4 134 aa12.02□□□□□ -0.49
TRAPPC1-206ENST00000573989 PRTFDC1Q9NRG1 225 aa12.02□□□□□ -0.49
TRAPPC1-206ENST00000573989 LANCL2Q9NS86 450 aa12.02□□□□□ -0.49
TRAPPC1-206ENST00000573989 FARSBQ9NSD9 589 aaKnown RBP12.02□□□□□ -0.49
TRAPPC1-206ENST00000573989 RIC8BQ9NVN3 520 aa12.02□□□□□ -0.49
TRAPPC1-206ENST00000573989 FBXL4Q9UKA2 621 aa12.02□□□□□ -0.49
TRAPPC1-206ENST00000573989 MGAQ8IWI9 3026 aa12.02□□□□□ -0.49
TRAPPC1-206ENST00000573989 LOC102723996A0A087X1L8 192 aa12.01□□□□□ -0.49
TRAPPC1-206ENST00000573989 A0A1W2PQ72 361 aa12.01□□□□□ -0.49
TRAPPC1-206ENST00000573989 WDR91A4D1P6 747 aa12.01□□□□□ -0.49
TRAPPC1-206ENST00000573989 TMEM114B3SHH9 223 aa12.01□□□□□ -0.49
TRAPPC1-206ENST00000573989 ATXN7O15265 892 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC1-206ENST00000573989 DNAJB6O75190 326 aa12.01□□□□□ -0.49
TRAPPC1-206ENST00000573989 HSPA4LO95757 839 aa12.01□□□□□ -0.49
TRAPPC1-206ENST00000573989 SERPINE1P05121 402 aa12.01□□□□□ -0.49
TRAPPC1-206ENST00000573989 FGF4P08620 206 aa12.01□□□□□ -0.49
TRAPPC1-206ENST00000573989 DHRS4L1P0CG22 281 aa12.01□□□□□ -0.49
TRAPPC1-206ENST00000573989 PPP2R1BP30154 601 aa12.01□□□□□ -0.49
TRAPPC1-206ENST00000573989 CCL11P51671 97 aa12.01□□□□□ -0.49
TRAPPC1-206ENST00000573989 OR4D2P58180 307 aa12.01□□□□□ -0.49
TRAPPC1-206ENST00000573989 EEF1A2Q05639 463 aaKnown RBP12.01□□□□□ -0.49
TRAPPC1-206ENST00000573989 ACSM2AQ08AH3 577 aa12.01□□□□□ -0.49
TRAPPC1-206ENST00000573989 STX4Q12846 297 aa12.01□□□□□ -0.49
TRAPPC1-206ENST00000573989 SLC13A2Q13183 592 aa12.01□□□□□ -0.49
TRAPPC1-206ENST00000573989 KCNAB2Q13303 367 aa12.01□□□□□ -0.49
TRAPPC1-206ENST00000573989 BIKQ13323 160 aa12.01□□□□□ -0.49
TRAPPC1-206ENST00000573989 CHI3L2Q15782 390 aa12.01□□□□□ -0.49
TRAPPC1-206ENST00000573989 ARL13AQ5H913 290 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC1-206ENST00000573989 TCHHL1Q5QJ38 904 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC1-206ENST00000573989 CCNYL2Q5T2Q4 361 aa12.01□□□□□ -0.49
TRAPPC1-206ENST00000573989 ACSM2BQ68CK6 577 aa12.01□□□□□ -0.49
TRAPPC1-206ENST00000573989 ZCCHC23Q6ZST2 131 aa12.01□□□□□ -0.49
TRAPPC1-206ENST00000573989 ANKRD37Q7Z713 158 aa12.01□□□□□ -0.49
TRAPPC1-206ENST00000573989 TRIM42Q8IWZ5 723 aa12.01□□□□□ -0.49
TRAPPC1-206ENST00000573989 CLYBLQ8N0X4 340 aa12.01□□□□□ -0.49
TRAPPC1-206ENST00000573989 METTL4Q8N3J2 472 aa12.01□□□□□ -0.49
TRAPPC1-206ENST00000573989 FAM47BQ8NA70 645 aa12.01□□□□□ -0.49
TRAPPC1-206ENST00000573989 LPAR4Q99677 370 aa12.01□□□□□ -0.49
TRAPPC1-206ENST00000573989 MAPKAP1Q9BPZ7 522 aa12.01□□□□□ -0.49
TRAPPC1-206ENST00000573989 SORBS1Q9BX66 1292 aaKnown RBP12.01□□□□□ -0.49
TRAPPC1-206ENST00000573989 MRPL1Q9BYD6 325 aaKnown RBP12.01□□□□□ -0.49
TRAPPC1-206ENST00000573989 SHCBP1LQ9BZQ2 653 aa12.01□□□□□ -0.49
TRAPPC1-206ENST00000573989 ZNF700Q9H0M5 742 aa12.01□□□□□ -0.49
TRAPPC1-206ENST00000573989 CACNA1GO43497 2377 aa12.01□□□□□ -0.49
TRAPPC1-206ENST00000573989 LOC400499M0QZD8 3231 aa12.01□□□□□ -0.49
TRAPPC1-206ENST00000573989 FAM208BQ5VWN6 2430 aa12□□□□□ -0.49
TRAPPC1-206ENST00000573989 ITPR1Q14643 2758 aa12□□□□□ -0.49
TRAPPC1-206ENST00000573989 UQCRHLA0A096LP55 91 aa12□□□□□ -0.49
TRAPPC1-206ENST00000573989 IGHV1-45A0A0A0MS14 117 aa12□□□□□ -0.49
TRAPPC1-206ENST00000573989 A0A0A6YYD5 115 aa12□□□□□ -0.49
TRAPPC1-206ENST00000573989 EIF4E1BA6NMX2 242 aaKnown RBP12□□□□□ -0.49
TRAPPC1-206ENST00000573989 HMGB1P1B2RPK0 211 aaPredicted RBP12□□□□□ -0.49
TRAPPC1-206ENST00000573989 FAM227AF5H4B4 570 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms