RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 GOLGA8NF8WBI6 632 aa11.21□□□□□ -0.61
NDE1-206ENST00000572967 PPP6CO00743 305 aa11.21□□□□□ -0.61
NDE1-206ENST00000572967 SKAP2O75563 359 aaPredicted RBP11.21□□□□□ -0.61
NDE1-206ENST00000572967 RSL1D1O76021 490 aaKnown RBP11.21□□□□□ -0.61
NDE1-206ENST00000572967 MED26O95402 600 aa11.21□□□□□ -0.61
NDE1-206ENST00000572967 EIF2S1P05198 315 aaKnown RBP11.21□□□□□ -0.61
NDE1-206ENST00000572967 SERPIND1P05546 499 aa11.21□□□□□ -0.61
NDE1-206ENST00000572967 KITP10721 976 aa11.21□□□□□ -0.61
NDE1-206ENST00000572967 ALOX15P16050 662 aaPredicted RBP11.21□□□□□ -0.61
NDE1-206ENST00000572967 GNLYP22749 145 aa11.21□□□□□ -0.61
NDE1-206ENST00000572967 TSFMP43897 325 aaKnown RBP11.21□□□□□ -0.61
NDE1-206ENST00000572967 OR1D4P47884 311 aa11.21□□□□□ -0.61
NDE1-206ENST00000572967 CD97P48960 835 aa11.21□□□□□ -0.61
NDE1-206ENST00000572967 ARSFP54793 590 aa11.21□□□□□ -0.61
NDE1-206ENST00000572967 GYS2P54840 703 aa11.21□□□□□ -0.61
NDE1-206ENST00000572967 EMP3P54852 163 aa11.21□□□□□ -0.61
NDE1-206ENST00000572967 IRX1P78414 480 aaPredicted RBP11.21□□□□□ -0.61
NDE1-206ENST00000572967 MEF2AQ02078 507 aaPredicted RBP11.21□□□□□ -0.61
NDE1-206ENST00000572967 CUL3Q13618 768 aa11.21□□□□□ -0.61
NDE1-206ENST00000572967 NR6A1Q15406 480 aa11.21□□□□□ -0.61
NDE1-206ENST00000572967 PDCD2Q16342 344 aaPredicted RBP11.21□□□□□ -0.61
NDE1-206ENST00000572967 SMU1Q2TAY7 513 aa11.21□□□□□ -0.61
NDE1-206ENST00000572967 ATP6AP1LQ52LC2 224 aa11.21□□□□□ -0.61
NDE1-206ENST00000572967 SPIN4Q56A73 249 aa11.21□□□□□ -0.61
NDE1-206ENST00000572967 GARNL3Q5VVW2 1013 aa11.21□□□□□ -0.61
NDE1-206ENST00000572967 JMJD6Q6NYC1 403 aaPredicted RBP11.21□□□□□ -0.61
NDE1-206ENST00000572967 TRIM40Q6P9F5 258 aa11.21□□□□□ -0.61
NDE1-206ENST00000572967 PAGE2Q7Z2X7 111 aa11.21□□□□□ -0.61
NDE1-206ENST00000572967 TRIM46Q7Z4K8 759 aa11.21□□□□□ -0.61
NDE1-206ENST00000572967 RBMXL3Q8N7X1 1067 aaKnown RBP11.21□□□□□ -0.61
NDE1-206ENST00000572967 Q8NA96 180 aa11.21□□□□□ -0.61
NDE1-206ENST00000572967 WDR20Q8TBZ3 569 aa11.21□□□□□ -0.61
NDE1-206ENST00000572967 NT5CQ8TCD5 201 aa11.21□□□□□ -0.61
NDE1-206ENST00000572967 ZNF473Q8WTR7 871 aaKnown RBP11.21□□□□□ -0.61
NDE1-206ENST00000572967 GAL3ST3Q96A11 431 aa11.21□□□□□ -0.61
NDE1-206ENST00000572967 FER1L6-AS2Q96M78 137 aa11.21□□□□□ -0.61
NDE1-206ENST00000572967 OR2A5Q96R48 311 aa11.21□□□□□ -0.61
NDE1-206ENST00000572967 KCNA7Q96RP8 456 aa11.21□□□□□ -0.61
NDE1-206ENST00000572967 SPSB2Q99619 263 aa11.21□□□□□ -0.61
NDE1-206ENST00000572967 COPS7BQ9H9Q2 264 aaPredicted RBP11.21□□□□□ -0.61
NDE1-206ENST00000572967 KLHL14Q9P2G3 628 aa11.21□□□□□ -0.61
NDE1-206ENST00000572967 VPS29Q9UBQ0 182 aa11.21□□□□□ -0.61
NDE1-206ENST00000572967 ZNF225Q9UK10 706 aa11.21□□□□□ -0.61
NDE1-206ENST00000572967 FBXL4Q9UKA2 621 aa11.21□□□□□ -0.61
NDE1-206ENST00000572967 SLC12A4Q9UP95 1085 aa11.21□□□□□ -0.61
NDE1-206ENST00000572967 TRIM33Q9UPN9 1127 aa11.21□□□□□ -0.61
NDE1-206ENST00000572967 TMED5Q9Y3A6 229 aa11.21□□□□□ -0.61
NDE1-206ENST00000572967 TIMM22Q9Y584 194 aa11.21□□□□□ -0.61
NDE1-206ENST00000572967 DOPEY2Q9Y3R5 2298 aa11.21□□□□□ -0.62
NDE1-206ENST00000572967 LOC105369274A0A096LPK9 316 aa11.2□□□□□ -0.62
NDE1-206ENST00000572967 LOC102723532A0A0G2JNH3 316 aa11.2□□□□□ -0.62
NDE1-206ENST00000572967 FEZF1A0PJY2 475 aa11.2□□□□□ -0.62
NDE1-206ENST00000572967 H0YGG7 62 aa11.2□□□□□ -0.62
NDE1-206ENST00000572967 PIP5K1BO14986 540 aa11.2□□□□□ -0.62
NDE1-206ENST00000572967 PRAMEF4O60810 478 aa11.2□□□□□ -0.62
NDE1-206ENST00000572967 DIAPH2O60879 1101 aa11.2□□□□□ -0.62
NDE1-206ENST00000572967 PDYNP01213 254 aa11.2□□□□□ -0.62
NDE1-206ENST00000572967 DDX5P17844 614 aaKnown RBP11.2□□□□□ -0.62
NDE1-206ENST00000572967 ITGA3P26006 1051 aa11.2□□□□□ -0.62
NDE1-206ENST00000572967 ARRB2P32121 409 aa11.2□□□□□ -0.62
NDE1-206ENST00000572967 ARF3P61204 181 aaPredicted RBP11.2□□□□□ -0.62
NDE1-206ENST00000572967 SRSF1Q07955 248 aaKnown RBP eCLIP11.2□□□□□ -0.62
NDE1-206ENST00000572967 ACSM2AQ08AH3 577 aa11.2□□□□□ -0.62
NDE1-206ENST00000572967 UBAP2LQ14157 1087 aaKnown RBP11.2□□□□□ -0.62
NDE1-206ENST00000572967 HERC3Q15034 1050 aa11.2□□□□□ -0.62
NDE1-206ENST00000572967 MUM1Q2TAK8 710 aa11.2□□□□□ -0.62
NDE1-206ENST00000572967 FAM214AQ32MH5 1076 aa11.2□□□□□ -0.62
NDE1-206ENST00000572967 SGO1Q5FBB7 561 aa11.2□□□□□ -0.62
NDE1-206ENST00000572967 PRAMEF9Q5VWM5 478 aa11.2□□□□□ -0.62
NDE1-206ENST00000572967 KHDRBS2Q5VWX1 349 aaKnown RBP11.2□□□□□ -0.62
NDE1-206ENST00000572967 CES4AQ5XG92 561 aa11.2□□□□□ -0.62
NDE1-206ENST00000572967 ACSM2BQ68CK6 577 aa11.2□□□□□ -0.62
NDE1-206ENST00000572967 PLD3Q8IV08 490 aa11.2□□□□□ -0.62
NDE1-206ENST00000572967 PRSS58Q8IYP2 241 aa11.2□□□□□ -0.62
NDE1-206ENST00000572967 OR4N4Q8N0Y3 316 aa11.2□□□□□ -0.62
NDE1-206ENST00000572967 GALNT16Q8N428 558 aa11.2□□□□□ -0.62
NDE1-206ENST00000572967 ZNF740Q8NDX6 193 aa11.2□□□□□ -0.62
NDE1-206ENST00000572967 TUBGCP3Q96CW5 907 aa11.2□□□□□ -0.62
NDE1-206ENST00000572967 MOCOSQ96EN8 888 aa11.2□□□□□ -0.62
NDE1-206ENST00000572967 C10orf90Q96M02 699 aa11.2□□□□□ -0.62
NDE1-206ENST00000572967 IP6K3Q96PC2 410 aa11.2□□□□□ -0.62
NDE1-206ENST00000572967 KCNC2Q96PR1 638 aa11.2□□□□□ -0.62
NDE1-206ENST00000572967 MTERF1Q99551 399 aaKnown RBP11.2□□□□□ -0.62
NDE1-206ENST00000572967 SMAD5Q99717 465 aaKnown RBP11.2□□□□□ -0.62
NDE1-206ENST00000572967 MS4A8Q9BY19 250 aa11.2□□□□□ -0.62
NDE1-206ENST00000572967 NUF2Q9BZD4 464 aa11.2□□□□□ -0.62
NDE1-206ENST00000572967 C20orf27Q9GZN8 174 aa11.2□□□□□ -0.62
NDE1-206ENST00000572967 REXO4Q9GZR2 422 aaKnown RBP11.2□□□□□ -0.62
NDE1-206ENST00000572967 FAM107BQ9H098 131 aa11.2□□□□□ -0.62
NDE1-206ENST00000572967 SYNPO2LQ9H987 977 aa11.2□□□□□ -0.62
NDE1-206ENST00000572967 MEAF6Q9HAF1 191 aa11.2□□□□□ -0.62
NDE1-206ENST00000572967 NPHS2Q9NP85 383 aa11.2□□□□□ -0.62
NDE1-206ENST00000572967 SLAMF7Q9NQ25 335 aa11.2□□□□□ -0.62
NDE1-206ENST00000572967 ENAMQ9NRM1 1142 aa11.2□□□□□ -0.62
NDE1-206ENST00000572967 PNPOQ9NVS9 261 aa11.2□□□□□ -0.62
NDE1-206ENST00000572967 VPS4AQ9UN37 437 aa11.2□□□□□ -0.62
NDE1-206ENST00000572967 PCDHGB7Q9Y5F8 929 aa11.2□□□□□ -0.62
NDE1-206ENST00000572967 SEC16AO15027 2179 aa11.2□□□□□ -0.62
NDE1-206ENST00000572967 DOCK10Q96BY6 2186 aa11.2□□□□□ -0.62
NDE1-206ENST00000572967 ASH1LQ9NR48 2969 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms