RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 NLRP8Q86W28 1048 aa16.7■□□□□ 0.26
SCARF1-205ENST00000571272 CHAC2Q8WUX2 184 aa16.7■□□□□ 0.26
SCARF1-205ENST00000571272 MAPKAP1Q9BPZ7 522 aa16.7■□□□□ 0.26
SCARF1-205ENST00000571272 TAPBPLQ9BX59 468 aa16.7■□□□□ 0.26
SCARF1-205ENST00000571272 BHLHE41Q9C0J9 482 aaPredicted RBP16.7■□□□□ 0.26
SCARF1-205ENST00000571272 AP1M2Q9Y6Q5 423 aa16.7■□□□□ 0.26
SCARF1-205ENST00000571272 ENPP4Q9Y6X5 453 aa16.7■□□□□ 0.26
SCARF1-205ENST00000571272 TRBV4-1A0A0J9YWV2 114 aa16.69■□□□□ 0.26
SCARF1-205ENST00000571272 PSIP1O75475 530 aaKnown RBP16.69■□□□□ 0.26
SCARF1-205ENST00000571272 PDHA2P29803 388 aa16.69■□□□□ 0.26
SCARF1-205ENST00000571272 HLA-FP30511 346 aa16.69■□□□□ 0.26
SCARF1-205ENST00000571272 PRSS53Q2L4Q9 553 aa16.69■□□□□ 0.26
SCARF1-205ENST00000571272 TRIM40Q6P9F5 258 aa16.69■□□□□ 0.26
SCARF1-205ENST00000571272 ZNF517Q6ZMY9 492 aaPredicted RBP16.69■□□□□ 0.26
SCARF1-205ENST00000571272 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.69■□□□□ 0.26
SCARF1-205ENST00000571272 MMP21Q8N119 569 aa16.69■□□□□ 0.26
SCARF1-205ENST00000571272 FIBINQ8TAL6 211 aa16.69■□□□□ 0.26
SCARF1-205ENST00000571272 PPCDCQ96CD2 204 aa16.69■□□□□ 0.26
SCARF1-205ENST00000571272 SMG9Q9H0W8 520 aaKnown RBP16.69■□□□□ 0.26
SCARF1-205ENST00000571272 CNOT2Q9NZN8 540 aaKnown RBP16.69■□□□□ 0.26
SCARF1-205ENST00000571272 SH2B3Q9UQQ2 575 aa16.69■□□□□ 0.26
SCARF1-205ENST00000571272 SH3D21A4FU49 640 aa16.69■□□□□ 0.26
SCARF1-205ENST00000571272 FADS2P1A8MWK0 482 aa16.69■□□□□ 0.26
SCARF1-205ENST00000571272 SEMA3DO95025 777 aa16.69■□□□□ 0.26
SCARF1-205ENST00000571272 CHRM5P08912 532 aaPredicted RBP16.69■□□□□ 0.26
SCARF1-205ENST00000571272 GJA1P17302 382 aa16.69■□□□□ 0.26
SCARF1-205ENST00000571272 LIMS1P48059 325 aa16.69■□□□□ 0.26
SCARF1-205ENST00000571272 RFX2P48378 723 aa16.69■□□□□ 0.26
SCARF1-205ENST00000571272 LRRC74AQ0VAA2 488 aa16.69■□□□□ 0.26
SCARF1-205ENST00000571272 FLCNQ8NFG4 579 aa16.69■□□□□ 0.26
SCARF1-205ENST00000571272 ASB15Q8WXK1 588 aa16.69■□□□□ 0.26
SCARF1-205ENST00000571272 TMCO6Q96DC7 493 aa16.69■□□□□ 0.26
SCARF1-205ENST00000571272 WRAP53Q9BUR4 548 aaKnown RBP16.69■□□□□ 0.26
SCARF1-205ENST00000571272 PPIL1Q9Y3C6 166 aa16.69■□□□□ 0.26
SCARF1-205ENST00000571272 A0A1W2PQ45 241 aaPredicted RBP16.68■□□□□ 0.26
SCARF1-205ENST00000571272 A0A1W2PQY0 241 aa16.68■□□□□ 0.26
SCARF1-205ENST00000571272 TAS2R50P59544 299 aa16.68■□□□□ 0.26
SCARF1-205ENST00000571272 RPS26P62854 115 aaKnown RBP16.68■□□□□ 0.26
SCARF1-205ENST00000571272 EEF1A2Q05639 463 aaKnown RBP16.68■□□□□ 0.26
SCARF1-205ENST00000571272 RBBP4Q09028 425 aa16.68■□□□□ 0.26
SCARF1-205ENST00000571272 FCHO2Q0JRZ9 810 aa16.68■□□□□ 0.26
SCARF1-205ENST00000571272 GPR50Q13585 617 aa16.68■□□□□ 0.26
SCARF1-205ENST00000571272 GPR162Q16538 588 aa16.68■□□□□ 0.26
SCARF1-205ENST00000571272 TRIM60Q495X7 471 aa16.68■□□□□ 0.26
SCARF1-205ENST00000571272 RPS26P11Q5JNZ5 115 aaPredicted RBP16.68■□□□□ 0.26
SCARF1-205ENST00000571272 SLX4IPQ5VYV7 408 aa16.68■□□□□ 0.26
SCARF1-205ENST00000571272 MED27Q6P2C8 311 aa16.68■□□□□ 0.26
SCARF1-205ENST00000571272 TMPRSS11AQ6ZMR5 421 aa16.68■□□□□ 0.26
SCARF1-205ENST00000571272 VASH1Q7L8A9 365 aaPredicted RBP16.68■□□□□ 0.26
SCARF1-205ENST00000571272 FAM46DQ8NEK8 389 aa16.68■□□□□ 0.26
SCARF1-205ENST00000571272 RIOK2Q9BVS4 552 aaKnown RBP16.68■□□□□ 0.26
SCARF1-205ENST00000571272 OR2B2Q9GZK3 357 aa16.68■□□□□ 0.26
SCARF1-205ENST00000571272 RNF186Q9NXI6 227 aa16.68■□□□□ 0.26
SCARF1-205ENST00000571272 ATP6V1HQ9UI12 483 aa16.68■□□□□ 0.26
SCARF1-205ENST00000571272 KCNE2Q9Y6J6 123 aa16.68■□□□□ 0.26
SCARF1-205ENST00000571272 HELZP42694 1942 aaKnown RBP16.68■□□□□ 0.26
SCARF1-205ENST00000571272 A0A075B6Q4 140 aa16.68■□□□□ 0.26
SCARF1-205ENST00000571272 FFAR1O14842 300 aa16.68■□□□□ 0.26
SCARF1-205ENST00000571272 CAPN5O15484 640 aaPredicted RBP16.68■□□□□ 0.26
SCARF1-205ENST00000571272 RECKO95980 971 aa16.68■□□□□ 0.26
SCARF1-205ENST00000571272 CATP04040 527 aaKnown RBP16.68■□□□□ 0.26
SCARF1-205ENST00000571272 IFNW1P05000 195 aa16.68■□□□□ 0.26
SCARF1-205ENST00000571272 FURINP09958 794 aa16.68■□□□□ 0.26
SCARF1-205ENST00000571272 ZFP69Q49AA0 526 aa16.68■□□□□ 0.26
SCARF1-205ENST00000571272 MPPE1Q53F39 396 aa16.68■□□□□ 0.26
SCARF1-205ENST00000571272 PAQR6Q6TCH4 344 aa16.68■□□□□ 0.26
SCARF1-205ENST00000571272 OXR1Q8N573 874 aa16.68■□□□□ 0.26
SCARF1-205ENST00000571272 IGSF21Q96ID5 467 aa16.68■□□□□ 0.26
SCARF1-205ENST00000571272 METTL2AQ96IZ6 378 aaKnown RBP16.68■□□□□ 0.26
SCARF1-205ENST00000571272 MMP28Q9H239 520 aa16.68■□□□□ 0.26
SCARF1-205ENST00000571272 V9GYH0 126 aa16.68■□□□□ 0.26
SCARF1-205ENST00000571272 DOCK6Q96HP0 2047 aa16.68■□□□□ 0.26
SCARF1-205ENST00000571272 ANKRD34BA5PLL1 514 aa16.67■□□□□ 0.26
SCARF1-205ENST00000571272 TLR4O00206 839 aa16.67■□□□□ 0.26
SCARF1-205ENST00000571272 CSO75390 466 aaKnown RBP16.67■□□□□ 0.26
SCARF1-205ENST00000571272 SCG5P05408 212 aa16.67■□□□□ 0.26
SCARF1-205ENST00000571272 GABRR2P28476 465 aa16.67■□□□□ 0.26
SCARF1-205ENST00000571272 HMGA2P52926 109 aa16.67■□□□□ 0.26
SCARF1-205ENST00000571272 LIM2P55344 173 aa16.67■□□□□ 0.26
SCARF1-205ENST00000571272 PUM1Q14671 1186 aaKnown RBP eCLIP16.67■□□□□ 0.26
SCARF1-205ENST00000571272 POM121L1PQ3SYA9 428 aa16.67■□□□□ 0.26
SCARF1-205ENST00000571272 CRB2Q5IJ48 1285 aa16.67■□□□□ 0.26
SCARF1-205ENST00000571272 SLCO4C1Q6ZQN7 724 aa16.67■□□□□ 0.26
SCARF1-205ENST00000571272 LILRB4Q8NHJ6 448 aa16.67■□□□□ 0.26
SCARF1-205ENST00000571272 GOT1L1Q8NHS2 421 aaPredicted RBP16.67■□□□□ 0.26
SCARF1-205ENST00000571272 TTYH2Q9BSA4 534 aa16.67■□□□□ 0.26
SCARF1-205ENST00000571272 TMEM38AQ9H6F2 299 aa16.67■□□□□ 0.26
SCARF1-205ENST00000571272 IL21Q9HBE4 155 aa16.67■□□□□ 0.26
SCARF1-205ENST00000571272 CCDC177Q9NQR7 707 aaPredicted RBP16.67■□□□□ 0.26
SCARF1-205ENST00000571272 H3BN98 237 aa16.67■□□□□ 0.26
SCARF1-205ENST00000571272 HOXC11O43248 304 aaPredicted RBP16.67■□□□□ 0.26
SCARF1-205ENST00000571272 GPR37L1O60883 481 aa16.67■□□□□ 0.26
SCARF1-205ENST00000571272 KLK1P06870 262 aa16.67■□□□□ 0.26
SCARF1-205ENST00000571272 RHCEP18577 417 aa16.67■□□□□ 0.26
SCARF1-205ENST00000571272 EPHB3P54753 998 aa16.67■□□□□ 0.26
SCARF1-205ENST00000571272 SLBPQ14493 270 aaKnown RBP eCLIP16.67■□□□□ 0.26
SCARF1-205ENST00000571272 SPHARQ15513 63 aa16.67■□□□□ 0.26
SCARF1-205ENST00000571272 ZNF79Q15937 498 aa16.67■□□□□ 0.26
SCARF1-205ENST00000571272 TOR1AIP1Q5JTV8 583 aa16.67■□□□□ 0.26
SCARF1-205ENST00000571272 RAB43Q86YS6 212 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms