RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 ROGDIQ9GZN7 287 aa12.21□□□□□ -0.45
CNOT1-220ENST00000569916 OR51B5Q9H339 312 aa12.21□□□□□ -0.45
CNOT1-220ENST00000569916 NOL11Q9H8H0 719 aaKnown RBP12.21□□□□□ -0.45
CNOT1-220ENST00000569916 ANKZF1Q9H8Y5 726 aa12.21□□□□□ -0.45
CNOT1-220ENST00000569916 LYRM4Q9HD34 91 aa12.21□□□□□ -0.45
CNOT1-220ENST00000569916 PRTFDC1Q9NRG1 225 aa12.21□□□□□ -0.45
CNOT1-220ENST00000569916 KCMF1Q9P0J7 381 aa12.21□□□□□ -0.45
CNOT1-220ENST00000569916 TMEM216Q9P0N5 145 aa12.21□□□□□ -0.45
CNOT1-220ENST00000569916 ADGRE2Q9UHX3 823 aa12.21□□□□□ -0.45
CNOT1-220ENST00000569916 TEKT2Q9UIF3 430 aa12.21□□□□□ -0.45
CNOT1-220ENST00000569916 MRPS33Q9Y291 106 aaKnown RBP12.21□□□□□ -0.45
CNOT1-220ENST00000569916 RNF11Q9Y3C5 154 aa12.21□□□□□ -0.45
CNOT1-220ENST00000569916 FLNCQ14315 2725 aa12.21□□□□□ -0.46
CNOT1-220ENST00000569916 A8MUA0 341 aa12.2□□□□□ -0.46
CNOT1-220ENST00000569916 A8MUI8 341 aa12.2□□□□□ -0.46
CNOT1-220ENST00000569916 TCP11X1B4DZS4 312 aa12.2□□□□□ -0.46
CNOT1-220ENST00000569916 PLPP1O14494 284 aa12.2□□□□□ -0.46
CNOT1-220ENST00000569916 MAN1A2O60476 641 aa12.2□□□□□ -0.46
CNOT1-220ENST00000569916 CLDN9O95484 217 aa12.2□□□□□ -0.46
CNOT1-220ENST00000569916 SHBGP04278 402 aa12.2□□□□□ -0.46
CNOT1-220ENST00000569916 HIST1H1TP22492 207 aaPredicted RBP12.2□□□□□ -0.46
CNOT1-220ENST00000569916 PPP2R1BP30154 601 aa12.2□□□□□ -0.46
CNOT1-220ENST00000569916 SSR2P43308 183 aa12.2□□□□□ -0.46
CNOT1-220ENST00000569916 CCNG1P51959 295 aa12.2□□□□□ -0.46
CNOT1-220ENST00000569916 RPS13P62277 151 aaKnown RBP12.2□□□□□ -0.46
CNOT1-220ENST00000569916 SRSF1Q07955 248 aaKnown RBP eCLIP12.2□□□□□ -0.46
CNOT1-220ENST00000569916 ZRSR2Q15696 482 aaKnown RBP12.2□□□□□ -0.46
CNOT1-220ENST00000569916 CPSF6Q16630 551 aaKnown RBP eCLIP12.2□□□□□ -0.46
CNOT1-220ENST00000569916 ACER2Q5QJU3 275 aa12.2□□□□□ -0.46
CNOT1-220ENST00000569916 RPUSD3Q6P087 351 aaKnown RBP12.2□□□□□ -0.46
CNOT1-220ENST00000569916 CHSY3Q70JA7 882 aa12.2□□□□□ -0.46
CNOT1-220ENST00000569916 RPS27LQ71UM5 84 aaKnown RBP12.2□□□□□ -0.46
CNOT1-220ENST00000569916 LCA5Q86VQ0 697 aa12.2□□□□□ -0.46
CNOT1-220ENST00000569916 BEST3Q8N1M1 668 aa12.2□□□□□ -0.46
CNOT1-220ENST00000569916 KIF2BQ8N4N8 673 aa12.2□□□□□ -0.46
CNOT1-220ENST00000569916 OR1N1Q8NGS0 311 aa12.2□□□□□ -0.46
CNOT1-220ENST00000569916 ZNF483Q8TF39 744 aaPredicted RBP12.2□□□□□ -0.46
CNOT1-220ENST00000569916 REPS1Q96D71 796 aa12.2□□□□□ -0.46
CNOT1-220ENST00000569916 MAPKAP1Q9BPZ7 522 aa12.2□□□□□ -0.46
CNOT1-220ENST00000569916 NTMT1Q9BV86 223 aa12.2□□□□□ -0.46
CNOT1-220ENST00000569916 SORBS1Q9BX66 1292 aaKnown RBP12.2□□□□□ -0.46
CNOT1-220ENST00000569916 C1QTNF3Q9BXJ4 246 aa12.2□□□□□ -0.46
CNOT1-220ENST00000569916 SLC29A3Q9BZD2 475 aa12.2□□□□□ -0.46
CNOT1-220ENST00000569916 PRM3Q9NNZ6 103 aa12.2□□□□□ -0.46
CNOT1-220ENST00000569916 TBK1Q9UHD2 729 aa12.2□□□□□ -0.46
CNOT1-220ENST00000569916 COPG1Q9Y678 874 aaKnown RBP12.2□□□□□ -0.46
CNOT1-220ENST00000569916 TRAV17A0A0B4J275 112 aa12.19□□□□□ -0.46
CNOT1-220ENST00000569916 A0A1B0GTL3 188 aa12.19□□□□□ -0.46
CNOT1-220ENST00000569916 OR5H15A6NDH6 313 aa12.19□□□□□ -0.46
CNOT1-220ENST00000569916 GOLGA8RI6L899 631 aa12.19□□□□□ -0.46
CNOT1-220ENST00000569916 CLDN4O14493 209 aa12.19□□□□□ -0.46
CNOT1-220ENST00000569916 ETHE1O95571 254 aa12.19□□□□□ -0.46
CNOT1-220ENST00000569916 ARL1P40616 181 aaPredicted RBP12.19□□□□□ -0.46
CNOT1-220ENST00000569916 NEK2P51955 445 aa12.19□□□□□ -0.46
CNOT1-220ENST00000569916 RAP1GDS1P52306 607 aa12.19□□□□□ -0.46
CNOT1-220ENST00000569916 PHEXP78562 749 aa12.19□□□□□ -0.46
CNOT1-220ENST00000569916 SLC13A2Q13183 592 aa12.19□□□□□ -0.46
CNOT1-220ENST00000569916 MRPL49Q13405 166 aaKnown RBP12.19□□□□□ -0.46
CNOT1-220ENST00000569916 RCN2Q14257 317 aa12.19□□□□□ -0.46
CNOT1-220ENST00000569916 TERF2Q15554 542 aa12.19□□□□□ -0.46
CNOT1-220ENST00000569916 AP5B1Q2VPB7 878 aa12.19□□□□□ -0.46
CNOT1-220ENST00000569916 GGTA1PQ4G0N0 100 aa12.19□□□□□ -0.46
CNOT1-220ENST00000569916 OR4C11Q6IEV9 310 aa12.19□□□□□ -0.46
CNOT1-220ENST00000569916 CLNKQ7Z7G1 428 aa12.19□□□□□ -0.46
CNOT1-220ENST00000569916 SLC5A8Q8N695 610 aa12.19□□□□□ -0.46
CNOT1-220ENST00000569916 ACMSDQ8TDX5 336 aa12.19□□□□□ -0.46
CNOT1-220ENST00000569916 UBLCP1Q8WVY7 318 aaPredicted RBP12.19□□□□□ -0.46
CNOT1-220ENST00000569916 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.19□□□□□ -0.463e-9■□□□□ 10.6
CNOT1-220ENST00000569916 ATP6V1E2Q96A05 226 aa12.19□□□□□ -0.46
CNOT1-220ENST00000569916 RGMAQ96B86 450 aa12.19□□□□□ -0.46
CNOT1-220ENST00000569916 ZNF354BQ96LW1 612 aa12.19□□□□□ -0.46
CNOT1-220ENST00000569916 ZNF717Q9BY31 904 aaPredicted RBP12.19□□□□□ -0.46
CNOT1-220ENST00000569916 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.19□□□□□ -0.461e-7■□□□□ 8.6
CNOT1-220ENST00000569916 SEMA4BQ9NPR2 832 aaPredicted RBP12.19□□□□□ -0.46
CNOT1-220ENST00000569916 STMN3Q9NZ72 180 aa12.19□□□□□ -0.46
CNOT1-220ENST00000569916 PPT2Q9UMR5 302 aa12.19□□□□□ -0.46
CNOT1-220ENST00000569916 PRRC2CQ9Y520 2896 aaKnown RBP12.18□□□□□ -0.46
CNOT1-220ENST00000569916 FOXE1O00358 373 aaPredicted RBP12.18□□□□□ -0.46
CNOT1-220ENST00000569916 PPP6CO00743 305 aa12.18□□□□□ -0.46
CNOT1-220ENST00000569916 CTNSO60931 367 aa12.18□□□□□ -0.46
CNOT1-220ENST00000569916 MYO1DO94832 1006 aa12.18□□□□□ -0.46
CNOT1-220ENST00000569916 PYGBP11216 843 aa12.18□□□□□ -0.46
CNOT1-220ENST00000569916 ARFIP1P53367 373 aa12.18□□□□□ -0.46
CNOT1-220ENST00000569916 TAS2R50P59544 299 aa12.18□□□□□ -0.46
CNOT1-220ENST00000569916 CUL3Q13618 768 aa12.18□□□□□ -0.46
CNOT1-220ENST00000569916 TUBA3CQ13748 450 aa12.18□□□□□ -0.46
CNOT1-220ENST00000569916 NR6A1Q15406 480 aa12.18□□□□□ -0.46
CNOT1-220ENST00000569916 MEP1AQ16819 746 aa12.18□□□□□ -0.46
CNOT1-220ENST00000569916 TUBA3EQ6PEY2 450 aa12.18□□□□□ -0.46
CNOT1-220ENST00000569916 CNPY4Q8N129 248 aa12.18□□□□□ -0.46
CNOT1-220ENST00000569916 LGI4Q8N135 537 aa12.18□□□□□ -0.46
CNOT1-220ENST00000569916 ZCCHC7Q8N3Z6 543 aaKnown RBP12.18□□□□□ -0.46
CNOT1-220ENST00000569916 APCDD1LQ8NCL9 501 aa12.18□□□□□ -0.46
CNOT1-220ENST00000569916 B3GNT7Q8NFL0 401 aa12.18□□□□□ -0.46
CNOT1-220ENST00000569916 OR4F6Q8NGB9 312 aa12.18□□□□□ -0.46
CNOT1-220ENST00000569916 GRHL3Q8TE85 626 aa12.18□□□□□ -0.46
CNOT1-220ENST00000569916 CCDC77Q9BR77 488 aa12.18□□□□□ -0.46
CNOT1-220ENST00000569916 CENPKQ9BS16 269 aa12.18□□□□□ -0.46
CNOT1-220ENST00000569916 ADAP2Q9NPF8 381 aa12.18□□□□□ -0.46
CNOT1-220ENST00000569916 PNO1Q9NRX1 252 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms