RNA–Protein interactions for RNA: ENST00000567988.5

FANCA-229, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 915 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-229ENST00000567988 TNFAIP8L3Q5GJ75 292 aa11.52□□□□□ -0.57
FANCA-229ENST00000567988 OR4C11Q6IEV9 310 aa11.52□□□□□ -0.57
FANCA-229ENST00000567988 PAPD4Q6PIY7 484 aaKnown RBP11.52□□□□□ -0.57
FANCA-229ENST00000567988 ATG14Q6ZNE5 492 aa11.52□□□□□ -0.57
FANCA-229ENST00000567988 CHSY3Q70JA7 882 aa11.52□□□□□ -0.57
FANCA-229ENST00000567988 ZNF595Q8IYB9 648 aa11.52□□□□□ -0.57
FANCA-229ENST00000567988 IQCKQ8N0W5 287 aa11.52□□□□□ -0.57
FANCA-229ENST00000567988 BANPQ8N9N5 519 aa11.52□□□□□ -0.57
FANCA-229ENST00000567988 M1APQ8TC57 530 aa11.52□□□□□ -0.57
FANCA-229ENST00000567988 BRIX1Q8TDN6 353 aaKnown RBP11.52□□□□□ -0.57
FANCA-229ENST00000567988 ELP5Q8TE02 316 aa11.52□□□□□ -0.57
FANCA-229ENST00000567988 PPP4R1Q8TF05 950 aa11.52□□□□□ -0.57
FANCA-229ENST00000567988 METTL21AQ8WXB1 218 aa11.52□□□□□ -0.57
FANCA-229ENST00000567988 CCT6BQ92526 530 aa11.52□□□□□ -0.57
FANCA-229ENST00000567988 PNPLA2Q96AD5 504 aa11.52□□□□□ -0.57
FANCA-229ENST00000567988 C11orf24Q96F05 449 aaPredicted RBP11.52□□□□□ -0.57
FANCA-229ENST00000567988 THOC3Q96J01 351 aaKnown RBP11.52□□□□□ -0.57
FANCA-229ENST00000567988 LMF1Q96S06 567 aa11.52□□□□□ -0.57
FANCA-229ENST00000567988 ROPN1BQ9BZX4 212 aaPredicted RBP11.52□□□□□ -0.57
FANCA-229ENST00000567988 ROGDIQ9GZN7 287 aa11.52□□□□□ -0.57
FANCA-229ENST00000567988 C12orf65Q9H3J6 166 aaKnown RBP11.52□□□□□ -0.57
FANCA-229ENST00000567988 ROPN1Q9HAT0 212 aaPredicted RBP11.52□□□□□ -0.57
FANCA-229ENST00000567988 MMP25Q9NPA2 562 aa11.52□□□□□ -0.57
FANCA-229ENST00000567988 SEMA4BQ9NPR2 832 aaPredicted RBP11.52□□□□□ -0.57
FANCA-229ENST00000567988 C19orf25Q9UFG5 118 aaPredicted RBP11.52□□□□□ -0.57
FANCA-229ENST00000567988 TRPS1Q9UHF7 1281 aa11.52□□□□□ -0.57
FANCA-229ENST00000567988 ANGPTL3Q9Y5C1 460 aa11.52□□□□□ -0.57
FANCA-229ENST00000567988 A0A088AWK7 358 aa11.51□□□□□ -0.57
FANCA-229ENST00000567988 SAGE2PA6NJ88 616 aa11.51□□□□□ -0.57
FANCA-229ENST00000567988 SAP18O00422 153 aaKnown RBP11.51□□□□□ -0.57
FANCA-229ENST00000567988 UBFD1O14562 309 aaKnown RBP11.51□□□□□ -0.57
FANCA-229ENST00000567988 SLC28A2O43868 658 aa11.51□□□□□ -0.57
FANCA-229ENST00000567988 TMPRSS11DO60235 418 aa11.51□□□□□ -0.57
FANCA-229ENST00000567988 EEDO75530 441 aaKnown RBP11.51□□□□□ -0.57
FANCA-229ENST00000567988 OTCP00480 354 aa11.51□□□□□ -0.57
FANCA-229ENST00000567988 ALPPP05187 535 aa11.51□□□□□ -0.57
FANCA-229ENST00000567988 PCNAP12004 261 aa11.51□□□□□ -0.57
FANCA-229ENST00000567988 KRT4P19013 534 aa11.51□□□□□ -0.57
FANCA-229ENST00000567988 TSPAN8P19075 237 aa11.51□□□□□ -0.57
FANCA-229ENST00000567988 ZNF10P21506 573 aaPredicted RBP11.51□□□□□ -0.57
FANCA-229ENST00000567988 PTX3P26022 381 aaPredicted RBP11.51□□□□□ -0.57
FANCA-229ENST00000567988 DNAJB13P59910 316 aa11.51□□□□□ -0.57
FANCA-229ENST00000567988 FOXK1P85037 733 aa11.51□□□□□ -0.57
FANCA-229ENST00000567988 TLE1Q04724 770 aa11.51□□□□□ -0.57
FANCA-229ENST00000567988 COLEC12Q5KU26 742 aa11.51□□□□□ -0.57
FANCA-229ENST00000567988 AGAP7PQ5VUJ5 663 aa11.51□□□□□ -0.57
FANCA-229ENST00000567988 SLC22A9Q8IVM8 553 aa11.51□□□□□ -0.57
FANCA-229ENST00000567988 APCDD1LQ8NCL9 501 aa11.51□□□□□ -0.57
FANCA-229ENST00000567988 RDH11Q8TC12 318 aa11.51□□□□□ -0.57
FANCA-229ENST00000567988 TRPC4APQ8TEL6 797 aa11.51□□□□□ -0.57
FANCA-229ENST00000567988 MIB2Q96AX9 1013 aa11.51□□□□□ -0.57
FANCA-229ENST00000567988 REPS1Q96D71 796 aa11.51□□□□□ -0.57
FANCA-229ENST00000567988 FAR2Q96K12 515 aa11.51□□□□□ -0.57
FANCA-229ENST00000567988 MAGEB10Q96LZ2 347 aaPredicted RBP11.51□□□□□ -0.57
FANCA-229ENST00000567988 PTCHD1Q96NR3 888 aa11.51□□□□□ -0.57
FANCA-229ENST00000567988 AGAP4Q96P64 663 aa11.51□□□□□ -0.57
FANCA-229ENST00000567988 RNF32Q9H0A6 362 aa11.51□□□□□ -0.57
FANCA-229ENST00000567988 FARSBQ9NSD9 589 aaKnown RBP11.51□□□□□ -0.57
FANCA-229ENST00000567988 ZNF223Q9UK11 482 aaPredicted RBP11.51□□□□□ -0.57
FANCA-229ENST00000567988 ASB4Q9Y574 426 aa11.51□□□□□ -0.57
FANCA-229ENST00000567988 PCDHGA10Q9Y5H3 936 aa11.51□□□□□ -0.57
FANCA-229ENST00000567988 CNTRLQ7Z7A1 2325 aa11.51□□□□□ -0.57
FANCA-229ENST00000567988 SERTM1A2A2V5 107 aa11.5□□□□□ -0.57
FANCA-229ENST00000567988 SMIM23A6NLE4 172 aa11.5□□□□□ -0.57
FANCA-229ENST00000567988 CTNSO60931 367 aa11.5□□□□□ -0.57
FANCA-229ENST00000567988 ICAM2P13598 275 aa11.5□□□□□ -0.57
FANCA-229ENST00000567988 KRT15P19012 456 aa11.5□□□□□ -0.57
FANCA-229ENST00000567988 TAC1P20366 129 aa11.5□□□□□ -0.57
FANCA-229ENST00000567988 PPP2R1BP30154 601 aa11.5□□□□□ -0.57
FANCA-229ENST00000567988 HNRNPH2P55795 449 aaKnown RBP11.5□□□□□ -0.57
FANCA-229ENST00000567988 TGM3Q08188 693 aa11.5□□□□□ -0.57
FANCA-229ENST00000567988 ZNF844Q08AG5 666 aa11.5□□□□□ -0.57
FANCA-229ENST00000567988 GALNT1Q10472 559 aaPredicted RBP11.5□□□□□ -0.57
FANCA-229ENST00000567988 TBL3Q12788 808 aaKnown RBP11.5□□□□□ -0.57
FANCA-229ENST00000567988 LCP2Q13094 533 aa11.5□□□□□ -0.57
FANCA-229ENST00000567988 PCLAFQ15004 111 aa11.5□□□□□ -0.57
FANCA-229ENST00000567988 EXT1Q16394 746 aa11.5□□□□□ -0.57
FANCA-229ENST00000567988 CCDC153Q494R4 210 aa11.5□□□□□ -0.57
FANCA-229ENST00000567988 PLEKHN1Q494U1 663 aaPredicted RBP11.5□□□□□ -0.57
FANCA-229ENST00000567988 TCHHL1Q5QJ38 904 aaPredicted RBP11.5□□□□□ -0.57
FANCA-229ENST00000567988 B3GNTL1Q67FW5 361 aaPredicted RBP11.5□□□□□ -0.57
FANCA-229ENST00000567988 ISLR2Q6UXK2 745 aa11.5□□□□□ -0.57
FANCA-229ENST00000567988 FRMD7Q6ZUT3 714 aa11.5□□□□□ -0.57
FANCA-229ENST00000567988 MILR1Q7Z6M3 343 aa11.5□□□□□ -0.57
FANCA-229ENST00000567988 CUZD1Q86UP6 607 aa11.5□□□□□ -0.57
FANCA-229ENST00000567988 C4orf33Q8N1A6 199 aa11.5□□□□□ -0.57
FANCA-229ENST00000567988 METTL4Q8N3J2 472 aa11.5□□□□□ -0.57
FANCA-229ENST00000567988 FAM47BQ8NA70 645 aa11.5□□□□□ -0.57
FANCA-229ENST00000567988 TEX19Q8NA77 164 aa11.5□□□□□ -0.57
FANCA-229ENST00000567988 OR6Y1Q8NGX8 325 aa11.5□□□□□ -0.57
FANCA-229ENST00000567988 AGAP11Q8TF27 550 aa11.5□□□□□ -0.57
FANCA-229ENST00000567988 RGMAQ96B86 450 aa11.5□□□□□ -0.57
FANCA-229ENST00000567988 ANKRD9Q96BM1 317 aaPredicted RBP11.5□□□□□ -0.57
FANCA-229ENST00000567988 SLC29A3Q9BZD2 475 aa11.5□□□□□ -0.57
FANCA-229ENST00000567988 BRF2Q9HAW0 419 aa11.5□□□□□ -0.57
FANCA-229ENST00000567988 TNFRSF12AQ9NP84 129 aa11.5□□□□□ -0.57
FANCA-229ENST00000567988 OXSMQ9NWU1 459 aa11.5□□□□□ -0.57
FANCA-229ENST00000567988 GRID1Q9ULK0 1009 aa11.5□□□□□ -0.57
FANCA-229ENST00000567988 B3GNT3Q9Y2A9 372 aa11.5□□□□□ -0.57
FANCA-229ENST00000567988 PLLPQ9Y342 182 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms