RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 FAM47BQ8NA70 645 aa18.62■□□□□ 0.57
CMTM3-207ENST00000564060 SNRNP40Q96DI7 357 aaKnown RBP18.62■□□□□ 0.57
CMTM3-207ENST00000564060 MTERF1Q99551 399 aaKnown RBP18.62■□□□□ 0.57
CMTM3-207ENST00000564060 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.62■□□□□ 0.57
CMTM3-207ENST00000564060 EPB41L4BQ9H329 900 aa18.62■□□□□ 0.57
CMTM3-207ENST00000564060 MS4A12Q9NXJ0 267 aa18.62■□□□□ 0.57
CMTM3-207ENST00000564060 PSD3Q9NYI0 1048 aa18.62■□□□□ 0.57
CMTM3-207ENST00000564060 STMN3Q9NZ72 180 aa18.62■□□□□ 0.57
CMTM3-207ENST00000564060 PPT2Q9UMR5 302 aa18.62■□□□□ 0.57
CMTM3-207ENST00000564060 ESPL1Q14674 2120 aa18.61■□□□□ 0.57
CMTM3-207ENST00000564060 OR5H15A6NDH6 313 aa18.61■□□□□ 0.57
CMTM3-207ENST00000564060 OTCP00480 354 aa18.61■□□□□ 0.57
CMTM3-207ENST00000564060 RPS17P08708 135 aaKnown RBP18.61■□□□□ 0.57
CMTM3-207ENST00000564060 TNFSF10P50591 281 aa18.61■□□□□ 0.57
CMTM3-207ENST00000564060 CUL3Q13618 768 aa18.61■□□□□ 0.57
CMTM3-207ENST00000564060 GGTA1PQ4G0N0 100 aa18.61■□□□□ 0.57
CMTM3-207ENST00000564060 PRR30Q53SZ7 412 aaPredicted RBP18.61■□□□□ 0.57
CMTM3-207ENST00000564060 OR4C11Q6IEV9 310 aa18.61■□□□□ 0.57
CMTM3-207ENST00000564060 CISD2Q8N5K1 135 aaKnown RBP18.61■□□□□ 0.57
CMTM3-207ENST00000564060 C1QTNF3Q9BXJ4 246 aa18.61■□□□□ 0.57
CMTM3-207ENST00000564060 OR51B5Q9H339 312 aa18.61■□□□□ 0.57
CMTM3-207ENST00000564060 NECTIN3Q9NQS3 549 aa18.61■□□□□ 0.57
CMTM3-207ENST00000564060 TBK1Q9UHD2 729 aa18.61■□□□□ 0.57
CMTM3-207ENST00000564060 RNF11Q9Y3C5 154 aa18.61■□□□□ 0.57
CMTM3-207ENST00000564060 SPENQ96T58 3664 aaKnown RBP18.61■□□□□ 0.57
CMTM3-207ENST00000564060 UBR5O95071 2799 aaPredicted RBP18.6■□□□□ 0.57
CMTM3-207ENST00000564060 TENM4Q6N022 2769 aa18.6■□□□□ 0.57
CMTM3-207ENST00000564060 A8MT66 165 aa18.6■□□□□ 0.57
CMTM3-207ENST00000564060 FOXE1O00358 373 aaPredicted RBP18.6■□□□□ 0.57
CMTM3-207ENST00000564060 CYR61O00622 381 aa18.6■□□□□ 0.57
CMTM3-207ENST00000564060 OR7A17O14581 309 aa18.6■□□□□ 0.57
CMTM3-207ENST00000564060 ZNF500O60304 480 aaPredicted RBP18.6■□□□□ 0.57
CMTM3-207ENST00000564060 CTNSO60931 367 aa18.6■□□□□ 0.57
CMTM3-207ENST00000564060 RPS13P62277 151 aaKnown RBP18.6■□□□□ 0.57
CMTM3-207ENST00000564060 ZRSR2Q15696 482 aaKnown RBP18.6■□□□□ 0.57
CMTM3-207ENST00000564060 ACER2Q5QJU3 275 aa18.6■□□□□ 0.57
CMTM3-207ENST00000564060 TTC19Q6DKK2 380 aaPredicted RBP18.6■□□□□ 0.57
CMTM3-207ENST00000564060 ZNF793Q6ZN11 406 aa18.6■□□□□ 0.57
CMTM3-207ENST00000564060 UBE3DQ7Z6J8 389 aa18.6■□□□□ 0.57
CMTM3-207ENST00000564060 SLC22A9Q8IVM8 553 aa18.6■□□□□ 0.57
CMTM3-207ENST00000564060 ZCCHC7Q8N3Z6 543 aaKnown RBP18.6■□□□□ 0.57
CMTM3-207ENST00000564060 OR52B6Q8NGF0 335 aa18.6■□□□□ 0.57
CMTM3-207ENST00000564060 OR1N1Q8NGS0 311 aa18.6■□□□□ 0.57
CMTM3-207ENST00000564060 ELP5Q8TE02 316 aa18.6■□□□□ 0.57
CMTM3-207ENST00000564060 ADAP2Q9NPF8 381 aa18.6■□□□□ 0.57
CMTM3-207ENST00000564060 ASF1BQ9NVP2 202 aa18.6■□□□□ 0.57
CMTM3-207ENST00000564060 TMEM216Q9P0N5 145 aa18.6■□□□□ 0.57
CMTM3-207ENST00000564060 DCDC2Q9UHG0 476 aa18.6■□□□□ 0.57
CMTM3-207ENST00000564060 PHF11Q9UIL8 331 aa18.6■□□□□ 0.57
CMTM3-207ENST00000564060 RP1L1Q8IWN7 2480 aaPredicted RBP18.59■□□□□ 0.57
CMTM3-207ENST00000564060 RTCAO00442 366 aaKnown RBP18.59■□□□□ 0.57
CMTM3-207ENST00000564060 SH3BGRLO75368 114 aa18.59■□□□□ 0.57
CMTM3-207ENST00000564060 WDPCPO95876 746 aa18.59■□□□□ 0.57
CMTM3-207ENST00000564060 CPN2P22792 545 aa18.59■□□□□ 0.57
CMTM3-207ENST00000564060 HERVK_113P63132 956 aa18.59■□□□□ 0.57
CMTM3-207ENST00000564060 STX4Q12846 297 aa18.59■□□□□ 0.57
CMTM3-207ENST00000564060 IFT88Q13099 833 aa18.59■□□□□ 0.57
CMTM3-207ENST00000564060 SERTAD2Q14140 314 aa18.59■□□□□ 0.57
CMTM3-207ENST00000564060 FRG2Q64ET8 278 aa18.59■□□□□ 0.57
CMTM3-207ENST00000564060 FAM180AQ6UWF9 173 aa18.59■□□□□ 0.57
CMTM3-207ENST00000564060 MILR1Q7Z6M3 343 aa18.59■□□□□ 0.57
CMTM3-207ENST00000564060 TDRPQ86YL5 185 aa18.59■□□□□ 0.57
CMTM3-207ENST00000564060 B3GNT7Q8NFL0 401 aa18.59■□□□□ 0.57
CMTM3-207ENST00000564060 MYRIPQ8NFW9 859 aa18.59■□□□□ 0.57
CMTM3-207ENST00000564060 WDR20Q8TBZ3 569 aa18.59■□□□□ 0.57
CMTM3-207ENST00000564060 ZNF483Q8TF39 744 aaPredicted RBP18.59■□□□□ 0.57
CMTM3-207ENST00000564060 FRG2BQ96QU4 278 aa18.59■□□□□ 0.57
CMTM3-207ENST00000564060 CSF3RQ99062 836 aa18.59■□□□□ 0.57
CMTM3-207ENST00000564060 SERPINI1Q99574 410 aa18.59■□□□□ 0.57
CMTM3-207ENST00000564060 ERVK-6Q9BXR3 956 aa18.59■□□□□ 0.57
CMTM3-207ENST00000564060 ANKZF1Q9H8Y5 726 aa18.59■□□□□ 0.57
CMTM3-207ENST00000564060 SEMA4BQ9NPR2 832 aaPredicted RBP18.59■□□□□ 0.57
CMTM3-207ENST00000564060 PLA2G3Q9NZ20 509 aa18.59■□□□□ 0.57
CMTM3-207ENST00000564060 KCMF1Q9P0J7 381 aa18.59■□□□□ 0.57
CMTM3-207ENST00000564060 SAP18O00422 153 aaKnown RBP18.58■□□□□ 0.56
CMTM3-207ENST00000564060 PLPP1O14494 284 aa18.58■□□□□ 0.56
CMTM3-207ENST00000564060 GLRA3O75311 464 aa18.58■□□□□ 0.56
CMTM3-207ENST00000564060 MYO1DO94832 1006 aa18.58■□□□□ 0.56
CMTM3-207ENST00000564060 SEMA3DO95025 777 aa18.58■□□□□ 0.56
CMTM3-207ENST00000564060 SBK3P0C264 359 aa18.58■□□□□ 0.56
CMTM3-207ENST00000564060 PYGBP11216 843 aa18.58■□□□□ 0.56
CMTM3-207ENST00000564060 KRT15P19012 456 aa18.58■□□□□ 0.56
CMTM3-207ENST00000564060 ATP5F1P24539 256 aaPredicted RBP18.58■□□□□ 0.56
CMTM3-207ENST00000564060 PPP2R1BP30154 601 aa18.58■□□□□ 0.56
CMTM3-207ENST00000564060 TLX1P31314 330 aaPredicted RBP18.58■□□□□ 0.56
CMTM3-207ENST00000564060 BUD31P41223 144 aaPredicted RBP18.58■□□□□ 0.56
CMTM3-207ENST00000564060 CLCN2P51788 898 aa18.58■□□□□ 0.56
CMTM3-207ENST00000564060 HNRNPFP52597 415 aaKnown RBP18.58■□□□□ 0.56
CMTM3-207ENST00000564060 TRAF3Q13114 568 aa18.58■□□□□ 0.56
CMTM3-207ENST00000564060 SLAMF1Q13291 335 aa18.58■□□□□ 0.56
CMTM3-207ENST00000564060 BIKQ13323 160 aa18.58■□□□□ 0.56
CMTM3-207ENST00000564060 ELOAQ14241 798 aaKnown RBP18.58■□□□□ 0.56
CMTM3-207ENST00000564060 RASA2Q15283 850 aa18.58■□□□□ 0.56
CMTM3-207ENST00000564060 ELAVL1Q15717 326 aaKnown RBP18.58■□□□□ 0.56
CMTM3-207ENST00000564060 NUDT13Q86X67 352 aa18.58■□□□□ 0.56
CMTM3-207ENST00000564060 CRLF3Q8IUI8 442 aa18.58■□□□□ 0.56
CMTM3-207ENST00000564060 TMEM132CQ8N3T6 1108 aa18.58■□□□□ 0.56
CMTM3-207ENST00000564060 TMEM151AQ8N4L1 468 aa18.58■□□□□ 0.56
CMTM3-207ENST00000564060 HORMAD2Q8N7B1 307 aa18.58■□□□□ 0.56
CMTM3-207ENST00000564060 CATSPER1Q8NEC5 780 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms