RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 FBXL3Q9UKT7 428 aa10.84□□□□□ -0.67
RPAP1-204ENST00000562303 PCDHGB6Q9Y5F9 930 aa10.84□□□□□ -0.67
RPAP1-204ENST00000562303 A0A1W2PQU0 124 aa10.84□□□□□ -0.67
RPAP1-204ENST00000562303 CKMT2P17540 419 aa10.84□□□□□ -0.67
RPAP1-204ENST00000562303 SOX2P48431 317 aa10.84□□□□□ -0.67
RPAP1-204ENST00000562303 SPANXN4Q5MJ08 99 aa10.84□□□□□ -0.67
RPAP1-204ENST00000562303 GLT8D1Q68CQ7 371 aa10.84□□□□□ -0.67
RPAP1-204ENST00000562303 USP53Q70EK8 1073 aa10.84□□□□□ -0.67
RPAP1-204ENST00000562303 NLGN4XQ8N0W4 816 aa10.84□□□□□ -0.67
RPAP1-204ENST00000562303 CMASQ8NFW8 434 aaPredicted RBP10.84□□□□□ -0.67
RPAP1-204ENST00000562303 KCNN1Q92952 543 aa10.84□□□□□ -0.67
RPAP1-204ENST00000562303 TAMM41Q96BW9 452 aa10.84□□□□□ -0.67
RPAP1-204ENST00000562303 DCSTAMPQ9H295 470 aa10.84□□□□□ -0.67
RPAP1-204ENST00000562303 REEP4Q9H6H4 257 aa10.84□□□□□ -0.67
RPAP1-204ENST00000562303 PCDH10Q9P2E7 1040 aa10.84□□□□□ -0.67
RPAP1-204ENST00000562303 NUFIP1Q9UHK0 495 aaKnown RBP10.84□□□□□ -0.67
RPAP1-204ENST00000562303 ERCC1P07992 297 aaPredicted RBP10.84□□□□□ -0.67
RPAP1-204ENST00000562303 FPR1P21462 350 aa10.84□□□□□ -0.67
RPAP1-204ENST00000562303 F8A1P23610 371 aa10.84□□□□□ -0.67
RPAP1-204ENST00000562303 RBMXP38159 391 aaKnown RBP10.84□□□□□ -0.67
RPAP1-204ENST00000562303 PAFAH1B3Q15102 231 aaKnown RBP10.84□□□□□ -0.67
RPAP1-204ENST00000562303 NNATQ16517 81 aa10.84□□□□□ -0.67
RPAP1-204ENST00000562303 ZNF542PQ5EBM4 170 aa10.84□□□□□ -0.67
RPAP1-204ENST00000562303 FAM182AQ5T1J6 154 aa10.84□□□□□ -0.67
RPAP1-204ENST00000562303 OR4K1Q8NGD4 311 aa10.84□□□□□ -0.67
RPAP1-204ENST00000562303 GRPEL2Q8TAA5 225 aa10.84□□□□□ -0.67
RPAP1-204ENST00000562303 BBS10Q8TAM1 723 aa10.84□□□□□ -0.67
RPAP1-204ENST00000562303 LRRC20Q8TCA0 184 aa10.84□□□□□ -0.67
RPAP1-204ENST00000562303 ELP5Q8TE02 316 aa10.84□□□□□ -0.67
RPAP1-204ENST00000562303 PXYLP1Q8TE99 480 aa10.84□□□□□ -0.67
RPAP1-204ENST00000562303 C10orf82Q8WW14 230 aa10.84□□□□□ -0.67
RPAP1-204ENST00000562303 MSLNLQ96KJ4 702 aa10.84□□□□□ -0.67
RPAP1-204ENST00000562303 FZD3Q9NPG1 666 aa10.84□□□□□ -0.67
RPAP1-204ENST00000562303 MTMR10Q9NXD2 777 aa10.84□□□□□ -0.67
RPAP1-204ENST00000562303 DNAJC27Q9NZQ0 273 aa10.84□□□□□ -0.67
RPAP1-204ENST00000562303 RARRES3Q9UL19 164 aa10.84□□□□□ -0.67
RPAP1-204ENST00000562303 LCHNA4D1U4 455 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 OTOL1A6NHN0 477 aaPredicted RBP10.83□□□□□ -0.68
RPAP1-204ENST00000562303 HEPACAM2A8MVW5 462 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 SEC14L5O43304 696 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 GSK3BP49841 420 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 GAS6Q14393 721 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 PTPRCAPQ14761 206 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 CPNE8Q86YQ8 564 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 CILP2Q8IUL8 1156 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 BADQ92934 168 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 KIAA1191Q96A73 305 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 TLCD1Q96CP7 247 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 PGAM5Q96HS1 289 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 NEDD4LQ96PU5 975 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 TAS2R10Q9NYW0 307 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 SH3PXD2BA1X283 911 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 FAM159BA6NKW6 160 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 ACOT7O00154 380 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 CHRM1P11229 460 aaPredicted RBP10.83□□□□□ -0.68
RPAP1-204ENST00000562303 JUPP14923 745 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 GSTM2P28161 218 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 ABHD18Q0P651 414 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 GALNT2Q10471 571 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 OLIG2Q13516 323 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 TGFBIQ15582 683 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 HSPA12BQ96MM6 686 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 P04436 131 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 HNRNPA1P09651 372 aaKnown RBP eCLIP10.83□□□□□ -0.68
RPAP1-204ENST00000562303 ENDOUP21128 410 aaKnown RBP10.83□□□□□ -0.68
RPAP1-204ENST00000562303 TPTEP56180 551 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 HSD11B2P80365 405 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 CYP1B1Q16678 543 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 KCTD18Q6PI47 426 aaPredicted RBP10.83□□□□□ -0.68
RPAP1-204ENST00000562303 SYCE2Q6PIF2 218 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 ERI1Q8IV48 349 aaKnown RBP10.83□□□□□ -0.68
RPAP1-204ENST00000562303 SCGB1C1Q8TD33 95 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 KCNA7Q96RP8 456 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 KDM4FA0A1W2PPD8 638 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 BHMG1C9JSJ3 638 aaPredicted RBP10.83□□□□□ -0.68
RPAP1-204ENST00000562303 OR12D1P0DN82 309 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 CSF2RAP15509 400 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 CREB1P16220 341 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 HRH2P25021 359 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 HNF1BP35680 557 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 SLC26A5P58743 744 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 UBE2NP61088 152 aaKnown RBP10.83□□□□□ -0.68
RPAP1-204ENST00000562303 DLX2Q07687 328 aaPredicted RBP10.83□□□□□ -0.68
RPAP1-204ENST00000562303 LMAN2Q12907 356 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 AIMP2Q13155 320 aaKnown RBP10.83□□□□□ -0.68
RPAP1-204ENST00000562303 USB1Q9BQ65 265 aaKnown RBP10.83□□□□□ -0.68
RPAP1-204ENST00000562303 C1orf21Q9H246 121 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 TXNRD2Q9NNW7 524 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 EPHA6Q9UF33 1036 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 MGAT4BQ9UQ53 548 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 CDH10Q9Y6N8 788 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 NFKBIEO00221 500 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 SOCS5O75159 536 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 PLATP00750 562 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 GRIA2P42262 883 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 SLC9A3P48764 834 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 STK19P49842 368 aaPredicted RBP10.83□□□□□ -0.68
RPAP1-204ENST00000562303 SNU13P55769 128 aaKnown RBP10.83□□□□□ -0.68
RPAP1-204ENST00000562303 EMX2Q04743 252 aa10.83□□□□□ -0.68
RPAP1-204ENST00000562303 SRYQ05066 204 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms