RNA–Protein interactions for RNA: ENST00000561685.1

RRN3-204, Transcript of RRN3 homolog, RNA polymerase I transcription factor, humanhuman

TSL 5

Gene RRN3, Length 615 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRN3-204ENST00000561685 PTERQ96BW5 349 aa2.49□□□□□ -2.01
RRN3-204ENST00000561685 UPF3BQ9BZI7 483 aaKnown RBP2.49□□□□□ -2.01
RRN3-204ENST00000561685 TMX4Q9H1E5 349 aaPredicted RBP2.49□□□□□ -2.01
RRN3-204ENST00000561685 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.49□□□□□ -2.01
RRN3-204ENST00000561685 ANAPC11Q9NYG5 84 aa2.49□□□□□ -2.01
RRN3-204ENST00000561685 ZNF581Q9P0T4 197 aa2.49□□□□□ -2.01
RRN3-204ENST00000561685 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.49□□□□□ -2.01
RRN3-204ENST00000561685 BAIAP2L1Q9UHR4 511 aa2.49□□□□□ -2.01
RRN3-204ENST00000561685 SLC24A2Q9UI40 661 aa2.49□□□□□ -2.01
RRN3-204ENST00000561685 POMT2Q9UKY4 750 aa2.49□□□□□ -2.01
RRN3-204ENST00000561685 PPIEQ9UNP9 301 aaKnown RBP2.49□□□□□ -2.01
RRN3-204ENST00000561685 VSIG4Q9Y279 399 aa2.49□□□□□ -2.01
RRN3-204ENST00000561685 RPS6KL1Q9Y6S9 549 aa2.49□□□□□ -2.01
RRN3-204ENST00000561685 MYO9AB2RTY4 2548 aa2.49□□□□□ -2.01
RRN3-204ENST00000561685 FBN2P35556 2912 aa2.49□□□□□ -2.01
RRN3-204ENST00000561685 PLXNA1Q9UIW2 1896 aa2.49□□□□□ -2.01
RRN3-204ENST00000561685 FER1L5A0AVI2 2057 aa2.49□□□□□ -2.01
RRN3-204ENST00000561685 CEP250Q9BV73 2442 aa2.49□□□□□ -2.01
RRN3-204ENST00000561685 TECTAO75443 2155 aa2.49□□□□□ -2.01
RRN3-204ENST00000561685 FLT4P35916 1363 aa2.49□□□□□ -2.01
RRN3-204ENST00000561685 CFAP46Q8IYW2 2715 aa2.48□□□□□ -2.01
RRN3-204ENST00000561685 HECTD1Q9ULT8 2610 aa2.48□□□□□ -2.01
RRN3-204ENST00000561685 COL4A4P53420 1690 aaPredicted RBP2.48□□□□□ -2.01
RRN3-204ENST00000561685 SPTBN2O15020 2390 aa2.48□□□□□ -2.01
RRN3-204ENST00000561685 CCL15-CCL14A0A0B4J2E2 113 aa2.48□□□□□ -2.01
RRN3-204ENST00000561685 CASTOR2A6NHX0 329 aa2.48□□□□□ -2.01
RRN3-204ENST00000561685 M0R296 226 aa2.48□□□□□ -2.01
RRN3-204ENST00000561685 SNX3O60493 162 aa2.48□□□□□ -2.01
RRN3-204ENST00000561685 ENTPD3O75355 529 aa2.48□□□□□ -2.01
RRN3-204ENST00000561685 MTRF1O75570 445 aaKnown RBP2.48□□□□□ -2.01
RRN3-204ENST00000561685 PROS1P07225 676 aa2.48□□□□□ -2.01
RRN3-204ENST00000561685 EPCAMP16422 314 aa2.48□□□□□ -2.01
RRN3-204ENST00000561685 PKLRP30613 574 aa2.48□□□□□ -2.01
RRN3-204ENST00000561685 CLNS1AP54105 237 aaKnown RBP2.48□□□□□ -2.01
RRN3-204ENST00000561685 RIPPLY3P57055 190 aa2.48□□□□□ -2.01
RRN3-204ENST00000561685 WTAPQ15007 396 aa2.48□□□□□ -2.01
RRN3-204ENST00000561685 CCL15Q16663 113 aa2.48□□□□□ -2.01
RRN3-204ENST00000561685 HERC4Q5GLZ8 1057 aaPredicted RBP2.48□□□□□ -2.01
RRN3-204ENST00000561685 FGD3Q5JSP0 725 aa2.48□□□□□ -2.01
RRN3-204ENST00000561685 KRTAP5-2Q701N4 177 aa2.48□□□□□ -2.01
RRN3-204ENST00000561685 TMUB2Q71RG4 321 aa2.48□□□□□ -2.01
RRN3-204ENST00000561685 KRTAP11-1Q8IUC1 163 aa2.48□□□□□ -2.01
RRN3-204ENST00000561685 LINC00346Q8IVM7 164 aa2.48□□□□□ -2.01
RRN3-204ENST00000561685 RCOR2Q8IZ40 523 aa2.48□□□□□ -2.01
RRN3-204ENST00000561685 SLC34A3Q8N130 599 aa2.48□□□□□ -2.01
RRN3-204ENST00000561685 TTC30BQ8N4P2 665 aa2.48□□□□□ -2.01
RRN3-204ENST00000561685 TMCO6Q96DC7 493 aa2.48□□□□□ -2.01
RRN3-204ENST00000561685 RSRC1Q96IZ7 334 aaKnown RBP2.48□□□□□ -2.01
RRN3-204ENST00000561685 RBM24Q9BX46 236 aaKnown RBP2.48□□□□□ -2.01
RRN3-204ENST00000561685 OCR1Q9BZK8 76 aa2.48□□□□□ -2.01
RRN3-204ENST00000561685 SLITRK2Q9H156 845 aa2.48□□□□□ -2.01
RRN3-204ENST00000561685 GHITMQ9H3K2 345 aa2.48□□□□□ -2.01
RRN3-204ENST00000561685 EGLN3Q9H6Z9 239 aa2.48□□□□□ -2.01
RRN3-204ENST00000561685 CDH20Q9HBT6 801 aa2.48□□□□□ -2.01
RRN3-204ENST00000561685 PIH1D3Q9NQM4 214 aaKnown RBP2.48□□□□□ -2.01
RRN3-204ENST00000561685 GSN-AS1Q9NRJ2 163 aa2.48□□□□□ -2.01
RRN3-204ENST00000561685 MRPL15Q9P015 296 aaKnown RBP2.48□□□□□ -2.01
RRN3-204ENST00000561685 NYAP2Q9P242 653 aa2.48□□□□□ -2.01
RRN3-204ENST00000561685 VPS28Q9UK41 221 aa2.48□□□□□ -2.01
RRN3-204ENST00000561685 ZNF256Q9Y2P7 627 aaPredicted RBP2.48□□□□□ -2.01
RRN3-204ENST00000561685 MTCH2Q9Y6C9 303 aa2.48□□□□□ -2.01
RRN3-204ENST00000561685 MGAMO43451 1857 aa2.48□□□□□ -2.01
RRN3-204ENST00000561685 FSD2A1L4K1 749 aa2.47□□□□□ -2.01
RRN3-204ENST00000561685 PTGESO14684 152 aa2.47□□□□□ -2.01
RRN3-204ENST00000561685 CYTIPO60759 359 aa2.47□□□□□ -2.01
RRN3-204ENST00000561685 HSP90AB1P08238 724 aaKnown RBP2.47□□□□□ -2.01
RRN3-204ENST00000561685 IL9P15248 144 aa2.47□□□□□ -2.01
RRN3-204ENST00000561685 ALOX12P18054 663 aa2.47□□□□□ -2.01
RRN3-204ENST00000561685 CD27P26842 260 aa2.47□□□□□ -2.01
RRN3-204ENST00000561685 KHKP50053 298 aa2.47□□□□□ -2.01
RRN3-204ENST00000561685 ATP4BP51164 291 aa2.47□□□□□ -2.01
RRN3-204ENST00000561685 VCPP55072 806 aaKnown RBP2.47□□□□□ -2.01
RRN3-204ENST00000561685 CLDN15P56746 228 aa2.47□□□□□ -2.01
RRN3-204ENST00000561685 ATP1A1-AS1Q5TC04 95 aa2.47□□□□□ -2.01
RRN3-204ENST00000561685 CTR9Q6PD62 1173 aa2.47□□□□□ -2.01
RRN3-204ENST00000561685 DNAAF5Q86Y56 855 aa2.47□□□□□ -2.01
RRN3-204ENST00000561685 SLC22A15Q8IZD6 547 aa2.47□□□□□ -2.01
RRN3-204ENST00000561685 C4orf32Q8N8J7 132 aa2.47□□□□□ -2.01
RRN3-204ENST00000561685 KLHL30-AS1Q8NEE0 82 aa2.47□□□□□ -2.01
RRN3-204ENST00000561685 AGAP11Q8TF27 550 aa2.47□□□□□ -2.01
RRN3-204ENST00000561685 TSACCQ96A04 125 aaPredicted RBP2.47□□□□□ -2.01
RRN3-204ENST00000561685 OPTNQ96CV9 577 aa2.47□□□□□ -2.01
RRN3-204ENST00000561685 SERAC1Q96JX3 654 aa2.47□□□□□ -2.01
RRN3-204ENST00000561685 BTBD9Q96Q07 612 aa2.47□□□□□ -2.01
RRN3-204ENST00000561685 UBAC1Q9BSL1 405 aa2.47□□□□□ -2.01
RRN3-204ENST00000561685 DNAI2Q9GZS0 605 aa2.47□□□□□ -2.01
RRN3-204ENST00000561685 NOL11Q9H8H0 719 aaKnown RBP2.47□□□□□ -2.01
RRN3-204ENST00000561685 MYOZ2Q9NPC6 264 aa2.47□□□□□ -2.01
RRN3-204ENST00000561685 TBC1D13Q9NVG8 400 aa2.47□□□□□ -2.01
RRN3-204ENST00000561685 ANGPTL2Q9UKU9 493 aa2.47□□□□□ -2.01
RRN3-204ENST00000561685 TMEM5Q9Y2B1 443 aa2.47□□□□□ -2.01
RRN3-204ENST00000561685 ATP6V0A2Q9Y487 856 aa2.47□□□□□ -2.01
RRN3-204ENST00000561685 DDX60Q8IY21 1712 aaKnown RBP2.47□□□□□ -2.01
RRN3-204ENST00000561685 IGSF10Q6WRI0 2623 aa2.47□□□□□ -2.01
RRN3-204ENST00000561685 RTL9Q8NET4 1388 aa2.47□□□□□ -2.01
RRN3-204ENST00000561685 EP300Q09472 2414 aaPredicted RBP2.47□□□□□ -2.01
RRN3-204ENST00000561685 PRRC2BQ5JSZ5 2229 aaKnown RBP2.46□□□□□ -2.01
RRN3-204ENST00000561685 IL16Q14005 1332 aa2.46□□□□□ -2.02
RRN3-204ENST00000561685 TRAV24A0A0B4J272 114 aa2.46□□□□□ -2.02
RRN3-204ENST00000561685 A0A1W2PPK0 400 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms