RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 OR4A47Q6IF82 309 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 FAM72DQ6L9T8 149 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 NOTUMQ6P988 496 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 C19orf48Q6RUI8 117 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 SLC26A9Q7LBE3 791 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 NRARPQ7Z6K4 114 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 ZNF410Q86VK4 478 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 FAM72BQ86X60 149 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 ECHDC2Q86YB7 292 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 TBC1D10CQ8IV04 446 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 UNC45BQ8IWX7 931 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 MMD2Q8IY49 270 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 NUP93Q8N1F7 819 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 STPG4Q8N801 248 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 SUMF1Q8NBK3 374 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 ZBTB44Q8NCP5 570 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 OR11H4Q8NGC9 324 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 OR13C3Q8NGS6 347 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 CTCFLQ8NI51 663 aaPredicted RBP3.39□□□□□ -1.87
HERC1-215ENST00000561436 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.39□□□□□ -1.87
HERC1-215ENST00000561436 RAD54LQ92698 747 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 CORO2AQ92828 525 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 DNASE1L2Q92874 299 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 MR1Q95460 341 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 CLDN23Q96B33 292 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 BSCL2Q96G97 398 aaPredicted RBP3.39□□□□□ -1.87
HERC1-215ENST00000561436 KLHL5Q96PQ7 755 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 TRMT61BQ9BVS5 477 aaKnown RBP3.39□□□□□ -1.87
HERC1-215ENST00000561436 ZBP1Q9H171 429 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 C2orf40Q9H1Z8 148 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 VAT1LQ9HCJ6 419 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 ZNF334Q9HCZ1 680 aaPredicted RBP3.39□□□□□ -1.87
HERC1-215ENST00000561436 A4GALTQ9NPC4 353 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 PPANQ9NQ55 473 aaKnown RBP3.39□□□□□ -1.87
HERC1-215ENST00000561436 TRPV5Q9NQA5 729 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 MRPL17Q9NRX2 175 aaKnown RBP3.39□□□□□ -1.87
HERC1-215ENST00000561436 FAM207AQ9NSI2 230 aaPredicted RBP3.39□□□□□ -1.87
HERC1-215ENST00000561436 NRBP2Q9NSY0 501 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 ABCB8Q9NUT2 735 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 ZNF701Q9NV72 531 aaPredicted RBP3.39□□□□□ -1.87
HERC1-215ENST00000561436 ACAD8Q9UKU7 415 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 ICAM5Q9UMF0 924 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 STUB1Q9UNE7 303 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 TCF20Q9UGU0 1960 aaKnown RBP3.39□□□□□ -1.87
HERC1-215ENST00000561436 SIPA1L1O43166 1804 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 SPEF2Q9C093 1822 aa3.39□□□□□ -1.87
HERC1-215ENST00000561436 XIRP2A4UGR9 3374 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 CACNA1FO60840 1977 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 A0A0U1RQK1 487 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 ZNF320A2RRD8 509 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 H0YAE9 185 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 P2RY10O00398 339 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 SLC30A4O14863 429 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 PI15O43692 258 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 CYTH3O43739 400 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 ATP9AO75110 1047 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 ZNF432O94892 652 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 GSRP00390 522 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 PDGFBP01127 241 aaPredicted RBP3.38□□□□□ -1.87
HERC1-215ENST00000561436 EDN1P05305 212 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 RETP07949 1114 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 DARSP14868 501 aaKnown RBP3.38□□□□□ -1.87
HERC1-215ENST00000561436 MARK3P27448 753 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 SFNP31947 248 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 CLCN4P51793 760 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 VAMP7P51809 220 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 MFAP3P55082 362 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 TUBB4BP68371 445 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 ZNF415Q09FC8 603 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 ANKRD20A4Q4UJ75 823 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 PHLDA2Q53GA4 152 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 ANKRD20A8PQ5CZ79 823 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 DCAF10Q5QP82 559 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 ANKRD20A2Q5SQ80 823 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 ANKRD20A1Q5TYW2 823 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 ANKRD20A3Q5VUR7 823 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 TXNRD3NBQ6F5E7 133 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 SLC35E4Q6ICL7 350 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 FAM219AQ8IW50 185 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 NIPA2Q8N8Q9 360 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 CCDC63Q8NA47 563 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 NHLRC2Q8NBF2 726 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 OR52N5Q8NH56 324 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 NCOA7Q8NI08 942 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 URGCPQ8TCY9 931 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 GRHL3Q8TE85 626 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 UBLCP1Q8WVY7 318 aaPredicted RBP3.38□□□□□ -1.87
HERC1-215ENST00000561436 TSACCQ96A04 125 aaPredicted RBP3.38□□□□□ -1.87
HERC1-215ENST00000561436 EXOC4Q96A65 974 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 CCDC51Q96ER9 411 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 FAM20AQ96MK3 541 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 PKP4Q99569 1192 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 GCOM2Q9BZD3 368 aaPredicted RBP3.38□□□□□ -1.87
HERC1-215ENST00000561436 LAT2Q9GZY6 243 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 RSPH9Q9H1X1 276 aaPredicted RBP3.38□□□□□ -1.87
HERC1-215ENST00000561436 ZNF556Q9HAH1 456 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 LY9Q9HBG7 655 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 ZNF302Q9NR11 478 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 ZFP57Q9NU63 452 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 PDRG1Q9NUG6 133 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms