RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 OR8J2Q8NGG1 315 aa15.78■□□□□ 0.12
TPM1-228ENST00000560975 SUSD3Q96L08 255 aa15.78■□□□□ 0.12
TPM1-228ENST00000560975 PKP4Q99569 1192 aa15.78■□□□□ 0.12
TPM1-228ENST00000560975 SLC25A19Q9HC21 320 aa15.78■□□□□ 0.12
TPM1-228ENST00000560975 CCDC88CQ9P219 2028 aa15.78■□□□□ 0.12
TPM1-228ENST00000560975 MPZL2O60487 215 aa15.78■□□□□ 0.12
TPM1-228ENST00000560975 HPGDSO60760 199 aa15.78■□□□□ 0.12
TPM1-228ENST00000560975 PSIP1O75475 530 aaKnown RBP15.78■□□□□ 0.12
TPM1-228ENST00000560975 TSPAN9O75954 239 aa15.78■□□□□ 0.12
TPM1-228ENST00000560975 ZNF91Q05481 1191 aa15.78■□□□□ 0.12
TPM1-228ENST00000560975 ACSM2AQ08AH3 577 aa15.78■□□□□ 0.12
TPM1-228ENST00000560975 NFATC2Q13469 925 aa15.78■□□□□ 0.12
TPM1-228ENST00000560975 SCARB2Q14108 478 aa15.78■□□□□ 0.12
TPM1-228ENST00000560975 POU4F3Q15319 338 aa15.78■□□□□ 0.12
TPM1-228ENST00000560975 UAP1L1Q3KQV9 507 aa15.78■□□□□ 0.12
TPM1-228ENST00000560975 ACSM2BQ68CK6 577 aa15.78■□□□□ 0.12
TPM1-228ENST00000560975 C9orf62Q8N4C0 152 aa15.78■□□□□ 0.12
TPM1-228ENST00000560975 TCEANCQ8N8B7 351 aa15.78■□□□□ 0.12
TPM1-228ENST00000560975 TMEM145Q8NBT3 493 aa15.78■□□□□ 0.12
TPM1-228ENST00000560975 GPR156Q8NFN8 814 aa15.78■□□□□ 0.12
TPM1-228ENST00000560975 OR52P1PQ8NH57 321 aa15.78■□□□□ 0.12
TPM1-228ENST00000560975 CHTF18Q8WVB6 975 aa15.78■□□□□ 0.12
TPM1-228ENST00000560975 MSANTD3Q96H12 275 aa15.78■□□□□ 0.12
TPM1-228ENST00000560975 PIP5K1AQ99755 562 aa15.78■□□□□ 0.12
TPM1-228ENST00000560975 TSSK6Q9BXA6 273 aa15.78■□□□□ 0.12
TPM1-228ENST00000560975 NMRK2Q9NPI5 230 aa15.78■□□□□ 0.12
TPM1-228ENST00000560975 C1orf226A1L170 272 aa15.77■□□□□ 0.12
TPM1-228ENST00000560975 SNTNA6NMZ2 147 aa15.77■□□□□ 0.12
TPM1-228ENST00000560975 FADS2P1A8MWK0 482 aa15.77■□□□□ 0.12
TPM1-228ENST00000560975 ISM1B1AKI9 464 aa15.77■□□□□ 0.12
TPM1-228ENST00000560975 FABP7O15540 132 aa15.77■□□□□ 0.12
TPM1-228ENST00000560975 ARHGEF15O94989 841 aa15.77■□□□□ 0.12
TPM1-228ENST00000560975 IL1AP01583 271 aa15.77■□□□□ 0.12
TPM1-228ENST00000560975 ATF4P18848 351 aaPredicted RBP15.77■□□□□ 0.12
TPM1-228ENST00000560975 HMGCLP35914 325 aa15.77■□□□□ 0.12
TPM1-228ENST00000560975 PCDH1Q08174 1060 aa15.77■□□□□ 0.12
TPM1-228ENST00000560975 HSPA14Q0VDF9 509 aa15.77■□□□□ 0.12
TPM1-228ENST00000560975 C1DQ13901 141 aaKnown RBP15.77■□□□□ 0.12
TPM1-228ENST00000560975 TEAD4Q15561 434 aa15.77■□□□□ 0.12
TPM1-228ENST00000560975 GPR162Q16538 588 aa15.77■□□□□ 0.12
TPM1-228ENST00000560975 ATAT1Q5SQI0 421 aa15.77■□□□□ 0.12
TPM1-228ENST00000560975 ADNP2Q6IQ32 1131 aa15.77■□□□□ 0.12
TPM1-228ENST00000560975 ANKRD54Q6NXT1 300 aa15.77■□□□□ 0.12
TPM1-228ENST00000560975 NPAS3Q8IXF0 933 aa15.77■□□□□ 0.12
TPM1-228ENST00000560975 NANOGP1Q8N7R0 232 aa15.77■□□□□ 0.12
TPM1-228ENST00000560975 OR5AK3PQ8NH89 298 aa15.77■□□□□ 0.12
TPM1-228ENST00000560975 TM9SF2Q99805 663 aa15.77■□□□□ 0.12
TPM1-228ENST00000560975 C17orf62Q9BQA9 187 aa15.77■□□□□ 0.12
TPM1-228ENST00000560975 GPATCH2Q9NW75 528 aa15.77■□□□□ 0.12
TPM1-228ENST00000560975 UCKL1Q9NWZ5 548 aa15.77■□□□□ 0.12
TPM1-228ENST00000560975 EIF3KQ9UBQ5 218 aaKnown RBP15.77■□□□□ 0.12
TPM1-228ENST00000560975 RAB23Q9ULC3 237 aa15.77■□□□□ 0.12
TPM1-228ENST00000560975 SEC14L5O43304 696 aa15.77■□□□□ 0.12
TPM1-228ENST00000560975 SLC22A5O76082 557 aa15.77■□□□□ 0.12
TPM1-228ENST00000560975 C1SP09871 688 aa15.77■□□□□ 0.12
TPM1-228ENST00000560975 ITGALP20701 1170 aa15.77■□□□□ 0.12
TPM1-228ENST00000560975 PTX3P26022 381 aaPredicted RBP15.77■□□□□ 0.12
TPM1-228ENST00000560975 TUSC3Q13454 348 aa15.77■□□□□ 0.12
TPM1-228ENST00000560975 TRIM71Q2Q1W2 868 aaKnown RBP15.77■□□□□ 0.12
TPM1-228ENST00000560975 ZBTB37Q5TC79 503 aa15.77■□□□□ 0.12
TPM1-228ENST00000560975 ZNF57Q68EA5 555 aaPredicted RBP15.77■□□□□ 0.12
TPM1-228ENST00000560975 DCLRE1CQ96SD1 692 aaKnown RBP15.77■□□□□ 0.12
TPM1-228ENST00000560975 WACQ9BTA9 647 aa15.77■□□□□ 0.12
TPM1-228ENST00000560975 KATNB1Q9BVA0 655 aa15.77■□□□□ 0.12
TPM1-228ENST00000560975 MCOLN1Q9GZU1 580 aa15.77■□□□□ 0.12
TPM1-228ENST00000560975 IL26Q9NPH9 171 aa15.77■□□□□ 0.12
TPM1-228ENST00000560975 MAP4K5Q9Y4K4 846 aa15.77■□□□□ 0.12
TPM1-228ENST00000560975 ALPK3Q96L96 1907 aa15.77■□□□□ 0.11
TPM1-228ENST00000560975 PDPK1O15530 556 aa15.77■□□□□ 0.11
TPM1-228ENST00000560975 ACADMP11310 421 aa15.77■□□□□ 0.11
TPM1-228ENST00000560975 PIPP12273 146 aaPredicted RBP15.77■□□□□ 0.11
TPM1-228ENST00000560975 RPS25P62851 125 aaKnown RBP15.77■□□□□ 0.11
TPM1-228ENST00000560975 ABATP80404 500 aa15.77■□□□□ 0.11
TPM1-228ENST00000560975 LRRC32Q14392 662 aa15.77■□□□□ 0.11
TPM1-228ENST00000560975 CHRNA6Q15825 494 aa15.77■□□□□ 0.11
TPM1-228ENST00000560975 ZNF284Q2VY69 593 aa15.77■□□□□ 0.11
TPM1-228ENST00000560975 CRTC2Q53ET0 693 aaPredicted RBP15.77■□□□□ 0.11
TPM1-228ENST00000560975 MPPE1Q53F39 396 aa15.77■□□□□ 0.11
TPM1-228ENST00000560975 RNF219Q5W0B1 726 aaPredicted RBP15.77■□□□□ 0.11
TPM1-228ENST00000560975 GPR142Q7Z601 462 aa15.77■□□□□ 0.11
TPM1-228ENST00000560975 DENND1CQ8IV53 801 aa15.77■□□□□ 0.11
TPM1-228ENST00000560975 SLC6A18Q96N87 628 aa15.77■□□□□ 0.11
TPM1-228ENST00000560975 FAM193BQ96PV7 902 aaPredicted RBP15.77■□□□□ 0.11
TPM1-228ENST00000560975 TM6SF2Q9BZW4 377 aa15.77■□□□□ 0.11
TPM1-228ENST00000560975 RDH14Q9HBH5 336 aa15.77■□□□□ 0.11
TPM1-228ENST00000560975 VPS29Q9UBQ0 182 aa15.77■□□□□ 0.11
TPM1-228ENST00000560975 NUP50Q9UKX7 468 aa15.77■□□□□ 0.11
TPM1-228ENST00000560975 FCF1Q9Y324 198 aaKnown RBP15.77■□□□□ 0.11
TPM1-228ENST00000560975 TRBV4-1A0A0J9YWV2 114 aa15.76■□□□□ 0.11
TPM1-228ENST00000560975 INMT-MINDY4F8WBC2 141 aa15.76■□□□□ 0.11
TPM1-228ENST00000560975 SCAMP2O15127 329 aaKnown RBP15.76■□□□□ 0.11
TPM1-228ENST00000560975 NCR1O76036 304 aa15.76■□□□□ 0.11
TPM1-228ENST00000560975 CLDN7O95471 211 aa15.76■□□□□ 0.11
TPM1-228ENST00000560975 IGLV3-27P01718 113 aa15.76■□□□□ 0.11
TPM1-228ENST00000560975 ATF6P18850 670 aa15.76■□□□□ 0.11
TPM1-228ENST00000560975 AOAHP28039 575 aa15.76■□□□□ 0.11
TPM1-228ENST00000560975 ARMC12Q5T9G4 340 aa15.76■□□□□ 0.11
TPM1-228ENST00000560975 HSDL2Q6YN16 418 aa15.76■□□□□ 0.11
TPM1-228ENST00000560975 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.76■□□□□ 0.11
TPM1-228ENST00000560975 IQCF1Q8N6M8 205 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms