RNA–Protein interactions for RNA: ENST00000560369.5

LRRC49-223, Transcript of leucine rich repeat containing 49, human

APPRIS ALT1 TSL 2 BASIC

Gene LRRC49, Length 2,586 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC49-223	ENST00000560369	CRISP3	P54108	245 aa		5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	LSM11	P83369	360 aa	Known RBP eCLIP	5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	OCA2	Q04671	838 aa		5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	ZNF763	Q0D2J5	394 aa		5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	KCNC3	Q14003	757 aa		5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	DGCR6	Q14129	220 aa		5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	SF3B4	Q15427	424 aa	Known RBP eCLIP	5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	SKIV2L	Q15477	1246 aa	Known RBP	5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	MLF2	Q15773	248 aa	Predicted RBP	5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	INA	Q16352	499 aa		5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	DUSP7	Q16829	419 aa		5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	ZNF750	Q32MQ0	723 aa		5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	ADPRM	Q3LIE5	342 aa		5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	TTC23	Q5W5X9	447 aa		5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	FAM71E1	Q6IPT2	247 aa		5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	KIAA1211L	Q6NV74	962 aa		5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	TTC23L	Q6PF05	361 aa		5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	FBXO46	Q6PJ61	603 aa	Predicted RBP	5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	CCDC81	Q6ZN84	652 aa		5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	ERN2	Q76MJ5	926 aa	Known RBP	5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	COMTD1	Q86VU5	262 aa		5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	FAM129C	Q86XR2	697 aa		5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	RBM45	Q8IUH3	476 aa	Known RBP	5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	SLC44A2	Q8IWA5	706 aa	Predicted RBP	5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	LAS2	Q8IYD9	372 aa		5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	NRSN1	Q8IZ57	195 aa		5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	TTC29	Q8NA56	475 aa	Predicted RBP	5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	ATG16L2	Q8NAA4	619 aa		5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	LEMD2	Q8NC56	503 aa		5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	OR2L2	Q8NH16	312 aa		5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	FBLIM1	Q8WUP2	373 aa		5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	OR8D1	Q8WZ84	308 aa		5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	DNASE1L2	Q92874	299 aa		5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	RAB8B	Q92930	207 aa		5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	NRBF2	Q96F24	287 aa		5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	FOPNL	Q96NB1	174 aa		5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	MIR1-1HG	Q9H1L0	117 aa		5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	REEP4	Q9H6H4	257 aa		5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	ANKRA2	Q9H9E1	313 aa		5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	TM9SF3	Q9HD45	589 aa		5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	AKIP1	Q9NQ31	210 aa		5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	C1GALT1	Q9NS00	363 aa		5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	SAMD4A	Q9UPU9	718 aa	Known RBP	5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	B3GNT3	Q9Y2A9	372 aa		5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	PCDHGA10	Q9Y5H3	936 aa		5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	SNX8	Q9Y5X2	465 aa		5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	PMF1-BGLAP	U3KQ54	211 aa		5.51	□□□□□ -1.53
LRRC49-223	ENST00000560369	IGKV1-8	A0A0C4DH67	115 aa		5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	EDDM13	A0A1B0GTR0	161 aa		5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369		A0A1W2PP55	124 aa		5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369		A0A1W2PPV9	198 aa		5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	GLOD5	A6NK44	160 aa		5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	OR52A4P	A6NMU1	304 aa		5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	TMPRSS11D	O60235	418 aa		5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	PCDH8	O95206	1070 aa		5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	NTN1	O95631	604 aa		5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	FADS2	O95864	444 aa	Known RBP	5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	LCK	P06239	509 aa		5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	HNRNPA1	P09651	372 aa	Known RBP eCLIP	5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	CD72	P21854	359 aa		5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	DNAJA1	P31689	397 aa	Known RBP	5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	GJA4	P35212	333 aa		5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	SOAT1	P35610	550 aa		5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	ALDH9A1	P49189	494 aa		5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	TPTE	P56180	551 aa		5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	RPP38	P78345	283 aa	Known RBP	5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	TFF2	Q03403	129 aa		5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	EEF1A2	Q05639	463 aa	Known RBP	5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	SLC13A2	Q13183	592 aa		5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	PPIG	Q13427	754 aa	Known RBP eCLIP	5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	GPM6B	Q13491	265 aa		5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	ELAVL3	Q14576	367 aa	Known RBP	5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	NPTX1	Q15818	432 aa		5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	TMEM31	Q5JXX7	168 aa		5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	RBM48	Q5RL73	367 aa	Known RBP	5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	PRAMEF14	Q5SWL7	426 aa		5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	PRAMEF13	Q5VWM6	474 aa		5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	UBE3D	Q7Z6J8	389 aa		5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	SLC22A16	Q86VW1	577 aa		5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	HORMAD1	Q86X24	394 aa		5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	HIPK1	Q86Z02	1210 aa		5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	CCDC103	Q8IW40	242 aa		5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	ENTHD1	Q8IYW4	607 aa		5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	SLC5A8	Q8N695	610 aa		5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	PSD4	Q8NDX1	1056 aa		5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	TMIE	Q8NEW7	156 aa		5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	ATL1	Q8WXF7	558 aa		5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	STARD8	Q92502	1023 aa		5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	TFG	Q92734	400 aa	Predicted RBP	5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	HTRA1	Q92743	480 aa		5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	MUL1	Q969V5	352 aa		5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	OTUB2	Q96DC9	234 aa		5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	ITPKC	Q96DU7	683 aa		5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	CNDP2	Q96KP4	475 aa	Known RBP	5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	NODAL	Q96S42	347 aa		5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	FEV	Q99581	238 aa		5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	YTHDF1	Q9BYJ9	559 aa	Known RBP	5.5	□□□□□ -1.53
LRRC49-223	ENST00000560369	TRIT1	Q9H3H1	467 aa	Known RBP	5.5	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms