RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 PSMC3IPQ9P2W1 217 aaPredicted RBP12.38□□□□□ -0.43
SMAD3-213ENST00000560175 NTNG1Q9Y2I2 539 aa12.38□□□□□ -0.43
SMAD3-213ENST00000560175 RNF11Q9Y3C5 154 aa12.38□□□□□ -0.43
SMAD3-213ENST00000560175 ANGPTL3Q9Y5C1 460 aa12.38□□□□□ -0.43
SMAD3-213ENST00000560175 PCDHGB6Q9Y5F9 930 aa12.38□□□□□ -0.43
SMAD3-213ENST00000560175 LRRK2Q5S007 2527 aa12.37□□□□□ -0.43
SMAD3-213ENST00000560175 BLACEA4D250 179 aa12.37□□□□□ -0.43
SMAD3-213ENST00000560175 SAGE2PA6NJ88 616 aa12.37□□□□□ -0.43
SMAD3-213ENST00000560175 A8MT66 165 aa12.37□□□□□ -0.43
SMAD3-213ENST00000560175 CLDN4O14493 209 aa12.37□□□□□ -0.43
SMAD3-213ENST00000560175 SMIM24O75264 130 aa12.37□□□□□ -0.43
SMAD3-213ENST00000560175 CBX6O95503 412 aa12.37□□□□□ -0.43
SMAD3-213ENST00000560175 WDPCPO95876 746 aa12.37□□□□□ -0.43
SMAD3-213ENST00000560175 GSTA1P08263 222 aa12.37□□□□□ -0.43
SMAD3-213ENST00000560175 CERS1P27544 350 aa12.37□□□□□ -0.43
SMAD3-213ENST00000560175 ACTN3Q08043 901 aaPredicted RBP12.37□□□□□ -0.43
SMAD3-213ENST00000560175 TRAF3Q13114 568 aa12.37□□□□□ -0.43
SMAD3-213ENST00000560175 RCN2Q14257 317 aa12.37□□□□□ -0.43
SMAD3-213ENST00000560175 ACER2Q5QJU3 275 aa12.37□□□□□ -0.43
SMAD3-213ENST00000560175 OR4C11Q6IEV9 310 aa12.37□□□□□ -0.43
SMAD3-213ENST00000560175 MRM1Q6IN84 353 aaKnown RBP12.37□□□□□ -0.43
SMAD3-213ENST00000560175 ATCAYQ86WG3 371 aa12.37□□□□□ -0.43
SMAD3-213ENST00000560175 GSPT2Q8IYD1 628 aaKnown RBP12.37□□□□□ -0.43
SMAD3-213ENST00000560175 RNF175Q8N4F7 328 aa12.37□□□□□ -0.43
SMAD3-213ENST00000560175 CISD2Q8N5K1 135 aaKnown RBP12.37□□□□□ -0.43
SMAD3-213ENST00000560175 APCDD1LQ8NCL9 501 aa12.37□□□□□ -0.43
SMAD3-213ENST00000560175 C7orf57Q8NEG2 295 aa12.37□□□□□ -0.43
SMAD3-213ENST00000560175 ARMC2Q8NEN0 867 aa12.37□□□□□ -0.43
SMAD3-213ENST00000560175 ZNF483Q8TF39 744 aaPredicted RBP12.37□□□□□ -0.43
SMAD3-213ENST00000560175 RGMAQ96B86 450 aa12.37□□□□□ -0.43
SMAD3-213ENST00000560175 REPS1Q96D71 796 aa12.37□□□□□ -0.43
SMAD3-213ENST00000560175 C19orf60Q96EN9 201 aa12.37□□□□□ -0.43
SMAD3-213ENST00000560175 MAPKAP1Q9BPZ7 522 aa12.37□□□□□ -0.43
SMAD3-213ENST00000560175 CCDC77Q9BR77 488 aa12.37□□□□□ -0.43
SMAD3-213ENST00000560175 ILKAPQ9H0C8 392 aaPredicted RBP12.37□□□□□ -0.43
SMAD3-213ENST00000560175 OR51B5Q9H339 312 aa12.37□□□□□ -0.43
SMAD3-213ENST00000560175 TRIM45Q9H8W5 580 aaPredicted RBP12.37□□□□□ -0.43
SMAD3-213ENST00000560175 PRTFDC1Q9NRG1 225 aa12.37□□□□□ -0.43
SMAD3-213ENST00000560175 ASF1BQ9NVP2 202 aa12.37□□□□□ -0.43
SMAD3-213ENST00000560175 PLA2G3Q9NZ20 509 aa12.37□□□□□ -0.43
SMAD3-213ENST00000560175 LUZP4Q9P127 313 aa12.37□□□□□ -0.43
SMAD3-213ENST00000560175 VTI1BQ9UEU0 232 aa12.37□□□□□ -0.43
SMAD3-213ENST00000560175 TEKT2Q9UIF3 430 aa12.37□□□□□ -0.43
SMAD3-213ENST00000560175 ZNF225Q9UK10 706 aa12.37□□□□□ -0.43
SMAD3-213ENST00000560175 MRPS33Q9Y291 106 aaKnown RBP12.37□□□□□ -0.43
SMAD3-213ENST00000560175 ZGRF1Q86YA3 2104 aa12.37□□□□□ -0.43
SMAD3-213ENST00000560175 TRAV17A0A0B4J275 112 aa12.36□□□□□ -0.43
SMAD3-213ENST00000560175 A0A1B0GTL3 188 aa12.36□□□□□ -0.43
SMAD3-213ENST00000560175 DYTNA2CJ06 578 aa12.36□□□□□ -0.43
SMAD3-213ENST00000560175 OR5H15A6NDH6 313 aa12.36□□□□□ -0.43
SMAD3-213ENST00000560175 TCP11X1B4DZS4 312 aa12.36□□□□□ -0.43
SMAD3-213ENST00000560175 PLPP1O14494 284 aa12.36□□□□□ -0.43
SMAD3-213ENST00000560175 SHBGP04278 402 aa12.36□□□□□ -0.43
SMAD3-213ENST00000560175 PCNAP12004 261 aa12.36□□□□□ -0.43
SMAD3-213ENST00000560175 BSGP35613 385 aa12.36□□□□□ -0.43
SMAD3-213ENST00000560175 RPS13P62277 151 aaKnown RBP12.36□□□□□ -0.43
SMAD3-213ENST00000560175 IGLV3-21P80748 117 aaPredicted RBP12.36□□□□□ -0.43
SMAD3-213ENST00000560175 ZRSR2Q15696 482 aaKnown RBP12.36□□□□□ -0.43
SMAD3-213ENST00000560175 CPSF6Q16630 551 aaKnown RBP eCLIP12.36□□□□□ -0.43
SMAD3-213ENST00000560175 MEP1AQ16819 746 aa12.36□□□□□ -0.43
SMAD3-213ENST00000560175 AP5B1Q2VPB7 878 aa12.36□□□□□ -0.43
SMAD3-213ENST00000560175 TEX35Q5T0J7 233 aa12.36□□□□□ -0.43
SMAD3-213ENST00000560175 ABHD17BQ5VST6 288 aa12.36□□□□□ -0.43
SMAD3-213ENST00000560175 ZNF324BQ6AW86 544 aaPredicted RBP12.36□□□□□ -0.43
SMAD3-213ENST00000560175 CRLF3Q8IUI8 442 aa12.36□□□□□ -0.43
SMAD3-213ENST00000560175 EFCAB3Q8N7B9 438 aa12.36□□□□□ -0.43
SMAD3-213ENST00000560175 SCYL1Q96KG9 808 aa12.36□□□□□ -0.43
SMAD3-213ENST00000560175 MAGEB10Q96LZ2 347 aaPredicted RBP12.36□□□□□ -0.43
SMAD3-213ENST00000560175 NSUN5Q96P11 429 aaKnown RBP12.36□□□□□ -0.43
SMAD3-213ENST00000560175 CSF3RQ99062 836 aa12.36□□□□□ -0.43
SMAD3-213ENST00000560175 MTERF1Q99551 399 aaKnown RBP12.36□□□□□ -0.43
SMAD3-213ENST00000560175 DDX31Q9H8H2 851 aaKnown RBP12.36□□□□□ -0.43
SMAD3-213ENST00000560175 KCNK13Q9HB14 408 aa12.36□□□□□ -0.43
SMAD3-213ENST00000560175 DCDC2Q9UHG0 476 aa12.36□□□□□ -0.43
SMAD3-213ENST00000560175 COPG1Q9Y678 874 aaKnown RBP12.36□□□□□ -0.43
SMAD3-213ENST00000560175 PTPN13Q12923 2485 aa12.35□□□□□ -0.43
SMAD3-213ENST00000560175 A0A1W2PPM1 405 aa12.35□□□□□ -0.43
SMAD3-213ENST00000560175 RTCAO00442 366 aaKnown RBP12.35□□□□□ -0.43
SMAD3-213ENST00000560175 PPP6CO00743 305 aa12.35□□□□□ -0.43
SMAD3-213ENST00000560175 DLX3O60479 287 aa12.35□□□□□ -0.43
SMAD3-213ENST00000560175 VPS4BO75351 444 aa12.35□□□□□ -0.43
SMAD3-213ENST00000560175 SEMA3DO95025 777 aa12.35□□□□□ -0.43
SMAD3-213ENST00000560175 ETHE1O95571 254 aa12.35□□□□□ -0.43
SMAD3-213ENST00000560175 PYGBP11216 843 aa12.35□□□□□ -0.43
SMAD3-213ENST00000560175 IMPDH1P20839 514 aa12.35□□□□□ -0.43
SMAD3-213ENST00000560175 HSD17B3P37058 310 aa12.35□□□□□ -0.43
SMAD3-213ENST00000560175 CCNG1P51959 295 aa12.35□□□□□ -0.43
SMAD3-213ENST00000560175 HERVK_113P63132 956 aa12.35□□□□□ -0.43
SMAD3-213ENST00000560175 ARG2P78540 354 aa12.35□□□□□ -0.43
SMAD3-213ENST00000560175 BIKQ13323 160 aa12.35□□□□□ -0.43
SMAD3-213ENST00000560175 INAQ16352 499 aa12.35□□□□□ -0.43
SMAD3-213ENST00000560175 UNC50Q53HI1 259 aa12.35□□□□□ -0.43
SMAD3-213ENST00000560175 ZNF678Q5SXM1 525 aa12.35□□□□□ -0.43
SMAD3-213ENST00000560175 FRG2Q64ET8 278 aa12.35□□□□□ -0.43
SMAD3-213ENST00000560175 B3GNT7Q8NFL0 401 aa12.35□□□□□ -0.43
SMAD3-213ENST00000560175 OR1N1Q8NGS0 311 aa12.35□□□□□ -0.43
SMAD3-213ENST00000560175 FAR1Q8WVX9 515 aa12.35□□□□□ -0.43
SMAD3-213ENST00000560175 ANKRD9Q96BM1 317 aaPredicted RBP12.35□□□□□ -0.43
SMAD3-213ENST00000560175 CDK15Q96Q40 435 aa12.35□□□□□ -0.43
SMAD3-213ENST00000560175 FRG2BQ96QU4 278 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms