RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 APIPQ96GX9 242 aa20.45■□□□□ 0.86
SNX1-206ENST00000559389 CSF3RQ99062 836 aa20.45■□□□□ 0.86
SNX1-206ENST00000559389 CRB3Q9BUF7 120 aa20.45■□□□□ 0.86
SNX1-206ENST00000559389 KCMF1Q9P0J7 381 aa20.45■□□□□ 0.86
SNX1-206ENST00000559389 SEC16AO15027 2179 aa20.45■□□□□ 0.86
SNX1-206ENST00000559389 IDSB3KWA1 339 aa20.44■□□□□ 0.86
SNX1-206ENST00000559389 PSMD12O00232 456 aaPredicted RBP20.44■□□□□ 0.86
SNX1-206ENST00000559389 FHP07954 510 aa20.44■□□□□ 0.86
SNX1-206ENST00000559389 CYC1P08574 325 aa20.44■□□□□ 0.86
SNX1-206ENST00000559389 JAK1P23458 1154 aa20.44■□□□□ 0.86
SNX1-206ENST00000559389 EFNA3P52797 238 aa20.44■□□□□ 0.86
SNX1-206ENST00000559389 HNRNPH2P55795 449 aaKnown RBP20.44■□□□□ 0.86
SNX1-206ENST00000559389 MC1RQ01726 317 aa20.44■□□□□ 0.86
SNX1-206ENST00000559389 SLAMF1Q13291 335 aa20.44■□□□□ 0.86
SNX1-206ENST00000559389 UGT8Q16880 541 aa20.44■□□□□ 0.86
SNX1-206ENST00000559389 TUBB8Q3ZCM7 444 aa20.44■□□□□ 0.86
SNX1-206ENST00000559389 FAM47BQ8NA70 645 aa20.44■□□□□ 0.86
SNX1-206ENST00000559389 ADAMTS17Q8TE56 1095 aa20.44■□□□□ 0.86
SNX1-206ENST00000559389 CKAP2Q8WWK9 683 aa20.44■□□□□ 0.86
SNX1-206ENST00000559389 MAPKAP1Q9BPZ7 522 aa20.44■□□□□ 0.86
SNX1-206ENST00000559389 VN1R1Q9GZP7 353 aa20.44■□□□□ 0.86
SNX1-206ENST00000559389 LYARQ9NX58 379 aaKnown RBP20.44■□□□□ 0.86
SNX1-206ENST00000559389 SIRT5Q9NXA8 310 aa20.44■□□□□ 0.86
SNX1-206ENST00000559389 PHF11Q9UIL8 331 aa20.44■□□□□ 0.86
SNX1-206ENST00000559389 C3orf18Q9UK00 162 aa20.44■□□□□ 0.86
SNX1-206ENST00000559389 K7ENP7 123 aa20.43■□□□□ 0.86
SNX1-206ENST00000559389 CYR61O00622 381 aa20.43■□□□□ 0.86
SNX1-206ENST00000559389 RGS14O43566 566 aa20.43■□□□□ 0.86
SNX1-206ENST00000559389 GBAP04062 536 aa20.43■□□□□ 0.86
SNX1-206ENST00000559389 JUNP05412 331 aaKnown RBP20.43■□□□□ 0.86
SNX1-206ENST00000559389 KLK1P06870 262 aa20.43■□□□□ 0.86
SNX1-206ENST00000559389 LINC00032P0C843 101 aa20.43■□□□□ 0.86
SNX1-206ENST00000559389 ACSM2AQ08AH3 577 aa20.43■□□□□ 0.86
SNX1-206ENST00000559389 CDC20Q12834 499 aa20.43■□□□□ 0.86
SNX1-206ENST00000559389 NR6A1Q15406 480 aa20.43■□□□□ 0.86
SNX1-206ENST00000559389 ST3GAL2Q16842 350 aa20.43■□□□□ 0.86
SNX1-206ENST00000559389 MINDY4Q4G0A6 757 aa20.43■□□□□ 0.86
SNX1-206ENST00000559389 SPDYAQ5MJ70 313 aa20.43■□□□□ 0.86
SNX1-206ENST00000559389 ACSM2BQ68CK6 577 aa20.43■□□□□ 0.86
SNX1-206ENST00000559389 GALNT18Q6P9A2 607 aa20.43■□□□□ 0.86
SNX1-206ENST00000559389 INO80CQ6PI98 192 aaPredicted RBP20.43■□□□□ 0.86
SNX1-206ENST00000559389 Q6ZSR9 355 aa20.43■□□□□ 0.86
SNX1-206ENST00000559389 LAPTM4BQ86VI4 370 aa20.43■□□□□ 0.86
SNX1-206ENST00000559389 C19orf60Q96EN9 201 aa20.43■□□□□ 0.86
SNX1-206ENST00000559389 C7orf26Q96N11 449 aa20.43■□□□□ 0.86
SNX1-206ENST00000559389 CCT7Q99832 543 aa20.43■□□□□ 0.86
SNX1-206ENST00000559389 CPNE5Q9HCH3 593 aa20.43■□□□□ 0.86
SNX1-206ENST00000559389 SEMA3GQ9NS98 782 aa20.43■□□□□ 0.86
SNX1-206ENST00000559389 FBXW2Q9UKT8 454 aa20.43■□□□□ 0.86
SNX1-206ENST00000559389 MKL2Q9ULH7 1088 aa20.43■□□□□ 0.86
SNX1-206ENST00000559389 CHD8Q9HCK8 2581 aa20.43■□□□□ 0.86
SNX1-206ENST00000559389 FAM227AF5H4B4 570 aa20.42■□□□□ 0.86
SNX1-206ENST00000559389 LSM1O15116 133 aaKnown RBP20.42■□□□□ 0.86
SNX1-206ENST00000559389 CDC123O75794 336 aaPredicted RBP20.42■□□□□ 0.86
SNX1-206ENST00000559389 FAM58BPP0C7Q3 252 aa20.42■□□□□ 0.86
SNX1-206ENST00000559389 TIA1P31483 386 aaKnown RBP eCLIP20.42■□□□□ 0.86
SNX1-206ENST00000559389 HNRNPFP52597 415 aaKnown RBP20.42■□□□□ 0.86
SNX1-206ENST00000559389 RAE1P78406 368 aaKnown RBP20.42■□□□□ 0.86
SNX1-206ENST00000559389 RHAGQ02094 409 aa20.42■□□□□ 0.86
SNX1-206ENST00000559389 TNFRSF17Q02223 184 aa20.42■□□□□ 0.86
SNX1-206ENST00000559389 ERV3-1Q14264 604 aa20.42■□□□□ 0.86
SNX1-206ENST00000559389 SSPNQ14714 243 aa20.42■□□□□ 0.86
SNX1-206ENST00000559389 PDCD2Q16342 344 aaPredicted RBP20.42■□□□□ 0.86
SNX1-206ENST00000559389 CCNYL2Q5T2Q4 361 aa20.42■□□□□ 0.86
SNX1-206ENST00000559389 MFSD4BQ5TF39 518 aa20.42■□□□□ 0.86
SNX1-206ENST00000559389 CYP20A1Q6UW02 462 aa20.42■□□□□ 0.86
SNX1-206ENST00000559389 RGS9BPQ6ZS82 235 aa20.42■□□□□ 0.86
SNX1-206ENST00000559389 PPP1R32Q7Z5V6 425 aa20.42■□□□□ 0.86
SNX1-206ENST00000559389 GPR180Q86V85 440 aa20.42■□□□□ 0.86
SNX1-206ENST00000559389 RAB43Q86YS6 212 aa20.42■□□□□ 0.86
SNX1-206ENST00000559389 EFCAB3Q8N7B9 438 aa20.42■□□□□ 0.86
SNX1-206ENST00000559389 ZSCAN1Q8NBB4 408 aa20.42■□□□□ 0.86
SNX1-206ENST00000559389 METTL2AQ96IZ6 378 aaKnown RBP20.42■□□□□ 0.86
SNX1-206ENST00000559389 MAGEB18Q96M61 343 aa20.42■□□□□ 0.86
SNX1-206ENST00000559389 LRTM1Q9HBL6 345 aa20.42■□□□□ 0.86
SNX1-206ENST00000559389 PNPOQ9NVS9 261 aa20.42■□□□□ 0.86
SNX1-206ENST00000559389 MS4A12Q9NXJ0 267 aa20.42■□□□□ 0.86
SNX1-206ENST00000559389 MCM8Q9UJA3 840 aa20.42■□□□□ 0.86
SNX1-206ENST00000559389 ASB4Q9Y574 426 aa20.42■□□□□ 0.86
SNX1-206ENST00000559389 SPACA6W5XKT8 324 aa20.42■□□□□ 0.86
SNX1-206ENST00000559389 PCSK5Q92824 1860 aa20.41■□□□□ 0.86
SNX1-206ENST00000559389 ARHGAP10A1A4S6 786 aa20.41■□□□□ 0.86
SNX1-206ENST00000559389 NKX2-8O15522 239 aa20.41■□□□□ 0.86
SNX1-206ENST00000559389 PCDH7O60245 1069 aa20.41■□□□□ 0.86
SNX1-206ENST00000559389 B4GALT2O60909 372 aa20.41■□□□□ 0.86
SNX1-206ENST00000559389 IGHEP01854 428 aa20.41■□□□□ 0.86
SNX1-206ENST00000559389 FURINP09958 794 aa20.41■□□□□ 0.86
SNX1-206ENST00000559389 PRKAR1AP10644 381 aa20.41■□□□□ 0.86
SNX1-206ENST00000559389 CPN2P22792 545 aa20.41■□□□□ 0.86
SNX1-206ENST00000559389 MMP11P24347 488 aa20.41■□□□□ 0.86
SNX1-206ENST00000559389 OTX2P32243 289 aa20.41■□□□□ 0.86
SNX1-206ENST00000559389 MAPK12P53778 367 aa20.41■□□□□ 0.86
SNX1-206ENST00000559389 EMP2P54851 167 aa20.41■□□□□ 0.86
SNX1-206ENST00000559389 BTKQ06187 659 aa20.41■□□□□ 0.86
SNX1-206ENST00000559389 VAC14Q08AM6 782 aa20.41■□□□□ 0.86
SNX1-206ENST00000559389 ATP1A1-AS1Q5TC04 95 aa20.41■□□□□ 0.86
SNX1-206ENST00000559389 QSOX2Q6ZRP7 698 aa20.41■□□□□ 0.86
SNX1-206ENST00000559389 MRGPREQ86SM8 312 aa20.41■□□□□ 0.86
SNX1-206ENST00000559389 TMEM52Q8NDY8 209 aa20.41■□□□□ 0.86
SNX1-206ENST00000559389 SNRNP27Q8WVK2 155 aaKnown RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms