RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 KHDRBS3O75525 346 aaKnown RBP1.42□□□□□ -2.18
USP3-209ENST00000558925 AP2A2O94973 939 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 OR6B1O95007 311 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 AKR7A3O95154 331 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 CAVIN2O95810 425 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 GUCA1CO95843 209 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 EPOP01588 193 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 EDN1P05305 212 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 PROS1P07225 676 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 PRSS1P07477 247 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 LYNP07948 512 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 MMP10P09238 476 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 TPBGLP0DKB5 382 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 CCDC192P0DO97 292 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 KRT5P13647 590 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 ANPEPP15144 967 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 GPX3P22352 226 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 ACP1P24666 158 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 ACKR3P25106 362 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 CTNNA2P26232 953 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 MARCKSP29966 332 aaPredicted RBP1.42□□□□□ -2.18
USP3-209ENST00000558925 TNFRSF4P43489 277 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 NSFP46459 744 aaKnown RBP1.42□□□□□ -2.18
USP3-209ENST00000558925 CCL11P51671 97 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 TKTL1P51854 596 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 LIMK2P53671 638 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 GEMP55040 296 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 PAX9P55771 341 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 HILS1P60008 231 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 KRTAP10-3P60369 221 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 GMFBP60983 142 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 HERV-K104P61576 105 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 SRSF9Q13242 221 aaKnown RBP eCLIP1.42□□□□□ -2.18
USP3-209ENST00000558925 GRB14Q14449 540 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 C3AR1Q16581 482 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 STX1AQ16623 288 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 ACCSLQ4AC99 568 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 FAM106AQ4KMX7 169 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 PDLIM3Q53GG5 364 aaPredicted RBP1.42□□□□□ -2.18
USP3-209ENST00000558925 CMPK2Q5EBM0 449 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 LCE3CQ5T5A8 94 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 ATP1A1-AS1Q5TC04 95 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 LIPJQ5W064 366 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 ARHGAP17Q68EM7 881 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 TCEAL6Q6IPX3 200 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 GALNT17Q6IS24 598 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 PWWP2BQ6NUJ5 590 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 NEPROQ6NW34 567 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 CD164L2Q6UWJ8 174 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 Q6ZRP5 223 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 TMEM26Q6ZUK4 368 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 C15orf52Q6ZUT6 534 aaKnown RBP1.42□□□□□ -2.18
USP3-209ENST00000558925 Q6ZVQ6 151 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 MIER3Q7Z3K6 550 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 HOGA1Q86XE5 327 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 CACUL1Q86Y37 369 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 KDM8Q8N371 416 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 MARVELD2Q8N4S9 558 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 RAB42Q8N4Z0 105 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 FAM89BQ8N5H3 189 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 TMEM99Q8N816 258 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 SIDT2Q8NBJ9 832 aaKnown RBP1.42□□□□□ -2.18
USP3-209ENST00000558925 ZBTB44Q8NCP5 570 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 CNNM3Q8NE01 707 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 C11orf45Q8TAV5 145 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 NR4A3Q92570 626 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 CASP10Q92851 521 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 TMEM186Q96B77 213 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 EEF2KMTQ96G04 330 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 CFAP36Q96G28 342 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 ZNF274Q96GC6 653 aaPredicted RBP1.42□□□□□ -2.18
USP3-209ENST00000558925 NSMCE2Q96MF7 247 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 GUCD1Q96NT3 240 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 PGLYRP2Q96PD5 576 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 INPP4AQ96PE3 977 aaPredicted RBP1.42□□□□□ -2.18
USP3-209ENST00000558925 UHRF2Q96PU4 802 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 NAP1L3Q99457 506 aaPredicted RBP1.42□□□□□ -2.18
USP3-209ENST00000558925 NKX3-1Q99801 234 aaPredicted RBP1.42□□□□□ -2.18
USP3-209ENST00000558925 COQ7Q99807 217 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 SSX3Q99909 188 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 FUNDC2Q9BWH2 189 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 MTMR12Q9C0I1 747 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 NYXQ9GZU5 481 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 WWP1Q9H0M0 922 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 DDX28Q9NUL7 540 aaKnown RBP1.42□□□□□ -2.18
USP3-209ENST00000558925 INTS10Q9NVR2 710 aaKnown RBP1.42□□□□□ -2.18
USP3-209ENST00000558925 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP1.42□□□□□ -2.18
USP3-209ENST00000558925 ZNF319Q9P2F9 582 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 TRIM10Q9UDY6 481 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 KCNN3Q9UGI6 736 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 IL20RAQ9UHF4 553 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 TSPAN16Q9UKR8 245 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 ELF5Q9UKW6 265 aaPredicted RBP1.42□□□□□ -2.18
USP3-209ENST00000558925 DIMT1Q9UNQ2 313 aaKnown RBP1.42□□□□□ -2.18
USP3-209ENST00000558925 PLA2G4CQ9UP65 541 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 C2CD2Q9Y426 696 aa1.42□□□□□ -2.18
USP3-209ENST00000558925 KLF2Q9Y5W3 355 aaPredicted RBP1.42□□□□□ -2.18
USP3-209ENST00000558925 A0A087WW49 117 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 A0A0G2JLW4 131 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 NPIPB9F8W1W9 429 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms