RNA–Protein interactions for RNA: ENST00000558452.1

RNF31-206, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-206	ENST00000558452	EMCN	Q9ULC0	261 aa		12.1	□□□□□ -0.47
RNF31-206	ENST00000558452	ARL2BP	Q9Y2Y0	163 aa		12.1	□□□□□ -0.47
RNF31-206	ENST00000558452	WDR91	A4D1P6	747 aa		12.09	□□□□□ -0.47
RNF31-206	ENST00000558452	ANKDD1B	A6NHY2	528 aa		12.09	□□□□□ -0.47
RNF31-206	ENST00000558452	C4orf51	C9J302	202 aa		12.09	□□□□□ -0.47
RNF31-206	ENST00000558452	CCNT2	O60583	730 aa	Known RBP	12.09	□□□□□ -0.47
RNF31-206	ENST00000558452	TRIM13	O60858	407 aa		12.09	□□□□□ -0.47
RNF31-206	ENST00000558452	KERA	O60938	352 aa		12.09	□□□□□ -0.47
RNF31-206	ENST00000558452	CDC123	O75794	336 aa	Predicted RBP	12.09	□□□□□ -0.47
RNF31-206	ENST00000558452	SEC24D	O94855	1032 aa	Predicted RBP	12.09	□□□□□ -0.47
RNF31-206	ENST00000558452	S100B	P04271	92 aa	Predicted RBP	12.09	□□□□□ -0.47
RNF31-206	ENST00000558452	FH	P07954	510 aa		12.09	□□□□□ -0.47
RNF31-206	ENST00000558452	ITGAM	P11215	1152 aa		12.09	□□□□□ -0.47
RNF31-206	ENST00000558452	EPOR	P19235	508 aa		12.09	□□□□□ -0.47
RNF31-206	ENST00000558452	GNLY	P22749	145 aa		12.09	□□□□□ -0.47
RNF31-206	ENST00000558452	JAK1	P23458	1154 aa		12.09	□□□□□ -0.47
RNF31-206	ENST00000558452	UQCRFS1	P47985	274 aa		12.09	□□□□□ -0.47
RNF31-206	ENST00000558452	STXBP1	P61764	594 aa	Known RBP	12.09	□□□□□ -0.47
RNF31-206	ENST00000558452	SRSF1	Q07955	248 aa	Known RBP eCLIP	12.09	□□□□□ -0.47
RNF31-206	ENST00000558452	UBAP2L	Q14157	1087 aa	Known RBP	12.09	□□□□□ -0.47
RNF31-206	ENST00000558452	CHI3L2	Q15782	390 aa		12.09	□□□□□ -0.47
RNF31-206	ENST00000558452	PLAG1	Q6DJT9	500 aa		12.09	□□□□□ -0.47
RNF31-206	ENST00000558452	CRLF3	Q8IUI8	442 aa		12.09	□□□□□ -0.47
RNF31-206	ENST00000558452	CENPL	Q8N0S6	344 aa	Predicted RBP	12.09	□□□□□ -0.47
RNF31-206	ENST00000558452	SIRT6	Q8N6T7	355 aa		12.09	□□□□□ -0.47
RNF31-206	ENST00000558452	SNX31	Q8N9S9	440 aa		12.09	□□□□□ -0.47
RNF31-206	ENST00000558452	RHEBL1	Q8TAI7	183 aa		12.09	□□□□□ -0.47
RNF31-206	ENST00000558452	KCTD4	Q8WVF5	259 aa		12.09	□□□□□ -0.47
RNF31-206	ENST00000558452	C19orf60	Q96EN9	201 aa		12.09	□□□□□ -0.47
RNF31-206	ENST00000558452	WDR34	Q96EX3	536 aa		12.09	□□□□□ -0.47
RNF31-206	ENST00000558452	PTCD3	Q96EY7	689 aa	Known RBP	12.09	□□□□□ -0.47
RNF31-206	ENST00000558452	RBCK1	Q9BYM8	510 aa		12.09	□□□□□ -0.47
RNF31-206	ENST00000558452	SLC29A3	Q9BZD2	475 aa		12.09	□□□□□ -0.47
RNF31-206	ENST00000558452	MAP10	Q9P2G4	905 aa		12.09	□□□□□ -0.47
RNF31-206	ENST00000558452	PCDHGA10	Q9Y5H3	936 aa		12.09	□□□□□ -0.47
RNF31-206	ENST00000558452	COPG1	Q9Y678	874 aa	Known RBP	12.09	□□□□□ -0.47
RNF31-206	ENST00000558452	LRIT2	A6NDA9	550 aa		12.08	□□□□□ -0.48
RNF31-206	ENST00000558452	MAGEB17	A8MXT2	336 aa		12.08	□□□□□ -0.48
RNF31-206	ENST00000558452	SUPT3H	B4E1H0	165 aa		12.08	□□□□□ -0.48
RNF31-206	ENST00000558452	UBXN8	O00124	270 aa		12.08	□□□□□ -0.48
RNF31-206	ENST00000558452	SNN	O75324	88 aa	Predicted RBP	12.08	□□□□□ -0.48
RNF31-206	ENST00000558452	SUPT3H	O75486	399 aa		12.08	□□□□□ -0.48
RNF31-206	ENST00000558452	CLEC3A	O75596	197 aa		12.08	□□□□□ -0.48
RNF31-206	ENST00000558452	TBX6	O95947	436 aa	Predicted RBP	12.08	□□□□□ -0.48
RNF31-206	ENST00000558452	MTHFD2	P13995	350 aa		12.08	□□□□□ -0.48
RNF31-206	ENST00000558452	BGN	P21810	368 aa		12.08	□□□□□ -0.48
RNF31-206	ENST00000558452	ATP5F1	P24539	256 aa	Predicted RBP	12.08	□□□□□ -0.48
RNF31-206	ENST00000558452	TSFM	P43897	325 aa	Known RBP	12.08	□□□□□ -0.48
RNF31-206	ENST00000558452	DNAJB13	P59910	316 aa		12.08	□□□□□ -0.48
RNF31-206	ENST00000558452	IRF9	Q00978	393 aa		12.08	□□□□□ -0.48
RNF31-206	ENST00000558452	LAPTM5	Q13571	262 aa		12.08	□□□□□ -0.48
RNF31-206	ENST00000558452	DOC2A	Q14183	400 aa		12.08	□□□□□ -0.48
RNF31-206	ENST00000558452	E2F2	Q14209	437 aa		12.08	□□□□□ -0.48
RNF31-206	ENST00000558452	ZNF169	Q14929	603 aa	Predicted RBP	12.08	□□□□□ -0.48
RNF31-206	ENST00000558452	PCLAF	Q15004	111 aa		12.08	□□□□□ -0.48
RNF31-206	ENST00000558452	TLR1	Q15399	786 aa		12.08	□□□□□ -0.48
RNF31-206	ENST00000558452	NSDHL	Q15738	373 aa		12.08	□□□□□ -0.48
RNF31-206	ENST00000558452	BTBD16	Q32M84	506 aa		12.08	□□□□□ -0.48
RNF31-206	ENST00000558452	XKR6	Q5GH73	641 aa		12.08	□□□□□ -0.48
RNF31-206	ENST00000558452	LIPM	Q5VYY2	423 aa		12.08	□□□□□ -0.48
RNF31-206	ENST00000558452	B3GNTL1	Q67FW5	361 aa	Predicted RBP	12.08	□□□□□ -0.48
RNF31-206	ENST00000558452	FAM47E	Q6ZV65	393 aa		12.08	□□□□□ -0.48
RNF31-206	ENST00000558452	LRRC70	Q7Z2Q7	622 aa		12.08	□□□□□ -0.48
RNF31-206	ENST00000558452	WDR75	Q8IWA0	830 aa	Known RBP	12.08	□□□□□ -0.48
RNF31-206	ENST00000558452	CATSPER1	Q8NEC5	780 aa		12.08	□□□□□ -0.48
RNF31-206	ENST00000558452	CCT6B	Q92526	530 aa		12.08	□□□□□ -0.48
RNF31-206	ENST00000558452	HAS2	Q92819	552 aa		12.08	□□□□□ -0.48
RNF31-206	ENST00000558452	TSLP	Q969D9	159 aa		12.08	□□□□□ -0.48
RNF31-206	ENST00000558452	GAL3ST3	Q96A11	431 aa		12.08	□□□□□ -0.48
RNF31-206	ENST00000558452	MS4A6E	Q96DS6	147 aa		12.08	□□□□□ -0.48
RNF31-206	ENST00000558452	CNDP1	Q96KN2	507 aa		12.08	□□□□□ -0.48
RNF31-206	ENST00000558452	EFCAB11	Q9BUY7	163 aa		12.08	□□□□□ -0.48
RNF31-206	ENST00000558452	OXSM	Q9NWU1	459 aa		12.08	□□□□□ -0.48
RNF31-206	ENST00000558452	ZNF490	Q9ULM2	529 aa	Predicted RBP	12.08	□□□□□ -0.48
RNF31-206	ENST00000558452	NTNG1	Q9Y2I2	539 aa		12.08	□□□□□ -0.48
RNF31-206	ENST00000558452	ASB1	Q9Y576	335 aa		12.08	□□□□□ -0.48
RNF31-206	ENST00000558452	USH1C	Q9Y6N9	552 aa		12.08	□□□□□ -0.48
RNF31-206	ENST00000558452	DYTN	A2CJ06	578 aa		12.07	□□□□□ -0.48
RNF31-206	ENST00000558452	SYCE1L	A8MT33	242 aa		12.07	□□□□□ -0.48
RNF31-206	ENST00000558452	SLCO1B7	G3V0H7	640 aa		12.07	□□□□□ -0.48
RNF31-206	ENST00000558452	ERI3	O43414	337 aa	Known RBP	12.07	□□□□□ -0.48
RNF31-206	ENST00000558452	B4GALT2	O60909	372 aa		12.07	□□□□□ -0.48
RNF31-206	ENST00000558452	DCTN3	O75935	186 aa		12.07	□□□□□ -0.48
RNF31-206	ENST00000558452	RNH1	P13489	461 aa	Known RBP	12.07	□□□□□ -0.48
RNF31-206	ENST00000558452	CD22	P20273	847 aa		12.07	□□□□□ -0.48
RNF31-206	ENST00000558452	HNRNPH1	P31943	449 aa	Known RBP	12.07	□□□□□ -0.48
RNF31-206	ENST00000558452	CASP2	P42575	452 aa		12.07	□□□□□ -0.48
RNF31-206	ENST00000558452	BTN3A2	P78410	334 aa		12.07	□□□□□ -0.48
RNF31-206	ENST00000558452	ARG2	P78540	354 aa		12.07	□□□□□ -0.48
RNF31-206	ENST00000558452	IRF8	Q02556	426 aa		12.07	□□□□□ -0.48
RNF31-206	ENST00000558452	ACTN3	Q08043	901 aa	Predicted RBP	12.07	□□□□□ -0.48
RNF31-206	ENST00000558452	CHIT1	Q13231	466 aa		12.07	□□□□□ -0.48
RNF31-206	ENST00000558452	ABRAXAS2	Q15018	415 aa		12.07	□□□□□ -0.48
RNF31-206	ENST00000558452	TBCC	Q15814	346 aa		12.07	□□□□□ -0.48
RNF31-206	ENST00000558452	EXT1	Q16394	746 aa		12.07	□□□□□ -0.48
RNF31-206	ENST00000558452	ADPRM	Q3LIE5	342 aa		12.07	□□□□□ -0.48
RNF31-206	ENST00000558452	SFT2D3	Q587I9	215 aa		12.07	□□□□□ -0.48
RNF31-206	ENST00000558452	PAGE2B	Q5JRK9	111 aa		12.07	□□□□□ -0.48
RNF31-206	ENST00000558452	H3F3C	Q6NXT2	135 aa		12.07	□□□□□ -0.48
RNF31-206	ENST00000558452	RPUSD3	Q6P087	351 aa	Known RBP	12.07	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms