RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 SLC12A4Q9UP95 1085 aa9.97□□□□□ -0.81
HNRNPC-232ENST00000557442 MRPS33Q9Y291 106 aaKnown RBP9.97□□□□□ -0.81
HNRNPC-232ENST00000557442 SPACA6W5XKT8 324 aa9.97□□□□□ -0.81
HNRNPC-232ENST00000557442 SMG1Q96Q15 3661 aaKnown RBP9.97□□□□□ -0.81
HNRNPC-232ENST00000557442 LOC102723996A0A087X1L8 192 aa9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 IGHV1-45A0A0A0MS14 117 aa9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 NSG1A0A0A6YYJ2 146 aa9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 A6NL46 340 aa9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 FAM227AF5H4B4 570 aa9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 H3BQF6 201 aa9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 MANBAO00462 879 aa9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 UBFD1O14562 309 aaKnown RBP9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 PRMT3O60678 531 aa9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 SEMA3DO95025 777 aa9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 SCELO95171 688 aa9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 HPP00738 406 aa9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 MAOAP21397 527 aa9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 ITGA3P26006 1051 aa9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 HTR6P50406 440 aa9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 ARFIP1P53367 373 aa9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 AIMP2Q13155 320 aaKnown RBP9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 RAPSNQ13702 412 aa9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 RCN2Q14257 317 aa9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 NSDHLQ15738 373 aa9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 TMEM205Q6UW68 189 aa9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 QSOX2Q6ZRP7 698 aa9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 ZCCHC23Q6ZST2 131 aa9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 LSM14AQ8ND56 463 aaKnown RBP9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 C9orf43Q8TAL5 461 aaPredicted RBP9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 PKNOX2Q96KN3 472 aa9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 PTCHD1Q96NR3 888 aa9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 CSF3RQ99062 836 aa9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 MAPKAP1Q9BPZ7 522 aa9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 SLC25A23Q9BV35 468 aa9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 GATA5Q9BWX5 397 aaPredicted RBP9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 ZNF717Q9BY31 904 aaPredicted RBP9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 MRPL1Q9BYD6 325 aaKnown RBP9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 SHCBP1LQ9BZQ2 653 aa9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 SEMA4CQ9C0C4 833 aa9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 BRF2Q9HAW0 419 aa9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 ZNF160Q9HCG1 818 aa9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 LYRM4Q9HD34 91 aa9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 KCNK9Q9NPC2 374 aa9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 ATP13A2Q9NQ11 1180 aa9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 RIC8BQ9NVN3 520 aa9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 PSD3Q9NYI0 1048 aa9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 TUBD1Q9UJT1 453 aa9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 FBXW2Q9UKT8 454 aa9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 TIMM22Q9Y584 194 aa9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 ACTL7BQ9Y614 415 aa9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 EXPH5Q8NEV8 1989 aa9.96□□□□□ -0.82
HNRNPC-232ENST00000557442 EML6Q6ZMW3 1958 aa9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 IGHV3-20A0A0C4DH32 117 aa9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 A0A1W2PQ72 361 aa9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 EIF4E1BA6NMX2 242 aaKnown RBP9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 TM9SF1O15321 606 aa9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 ULK1O75385 1050 aa9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 EEDO75530 441 aaKnown RBP9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 SEC24DO94855 1032 aaPredicted RBP9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 ZWINTO95229 277 aa9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 BPGMP07738 259 aa9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 SFTPCP11686 197 aa9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 HSD3B1P14060 373 aa9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 H2AFXP16104 143 aaPredicted RBP9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 CPN2P22792 545 aa9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 HSD3B2P26439 372 aa9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 BSGP35613 385 aa9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 ETV4P43268 484 aa9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 SERPINB4P48594 390 aa9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 HNRNPFP52597 415 aaKnown RBP9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 FOXA1P55317 472 aa9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 BTG2P78543 158 aa9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 CSTF3Q12996 717 aaKnown RBP9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 SLC13A2Q13183 592 aa9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 SLAMF1Q13291 335 aa9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 PCOLCEQ15113 449 aa9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 SOWAHCQ53LP3 525 aaPredicted RBP9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 SFT2D3Q587I9 215 aa9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 IRAK1BP1Q5VVH5 260 aa9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 CYP20A1Q6UW02 462 aa9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 NDUFAF7Q7L592 441 aa9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 CPEB2Q7Z5Q1 589 aaKnown RBP9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 ANKRD37Q7Z713 158 aa9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 CLNKQ7Z7G1 428 aa9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 PARP9Q8IXQ6 854 aa9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 ZCCHC7Q8N3Z6 543 aaKnown RBP9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 GALNT16Q8N428 558 aa9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 TMEM52Q8NDY8 209 aa9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 PLPP5Q8NEB5 264 aa9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 FDCSPQ8NFU4 85 aa9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 ABHD17AQ96GS6 310 aa9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 CNDP1Q96KN2 507 aa9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 TRMOQ9BU70 441 aa9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 ZNF700Q9H0M5 742 aa9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 TMBIM4Q9HC24 238 aa9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 PRDM9Q9NQV7 894 aa9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 ZNF71Q9NQZ8 489 aaPredicted RBP9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 PRTFDC1Q9NRG1 225 aa9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 NMRK1Q9NWW6 199 aa9.95□□□□□ -0.82
HNRNPC-232ENST00000557442 GPR83Q9NYM4 423 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms