RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 CYP4Z2PQ8N1L4 340 aa13.22□□□□□ -0.29
SNX6-210ENST00000557341 TMEM156Q8N614 296 aa13.22□□□□□ -0.29
SNX6-210ENST00000557341 POGLUT1Q8NBL1 392 aa13.22□□□□□ -0.29
SNX6-210ENST00000557341 TMEM52Q8NDY8 209 aa13.22□□□□□ -0.29
SNX6-210ENST00000557341 KCNC2Q96PR1 638 aa13.22□□□□□ -0.29
SNX6-210ENST00000557341 CSF3RQ99062 836 aa13.22□□□□□ -0.29
SNX6-210ENST00000557341 CHST11Q9NPF2 352 aa13.22□□□□□ -0.29
SNX6-210ENST00000557341 NUDT4Q9NZJ9 180 aa13.22□□□□□ -0.29
SNX6-210ENST00000557341 PTBP2Q9UKA9 531 aaKnown RBP13.22□□□□□ -0.29
SNX6-210ENST00000557341 FBXW2Q9UKT8 454 aa13.22□□□□□ -0.29
SNX6-210ENST00000557341 DAPP1Q9UN19 280 aa13.22□□□□□ -0.29
SNX6-210ENST00000557341 PPIEQ9UNP9 301 aaKnown RBP13.22□□□□□ -0.29
SNX6-210ENST00000557341 ZNF407Q9C0G0 2248 aa13.22□□□□□ -0.29
SNX6-210ENST00000557341 EXPH5Q8NEV8 1989 aa13.21□□□□□ -0.29
SNX6-210ENST00000557341 DNAJC13O75165 2243 aa13.21□□□□□ -0.29
SNX6-210ENST00000557341 KLRC4-KLRK1H3BQV0 150 aa13.21□□□□□ -0.29
SNX6-210ENST00000557341 TGFBR3LH3BV60 316 aa13.21□□□□□ -0.29
SNX6-210ENST00000557341 TFECO14948 347 aaPredicted RBP13.21□□□□□ -0.29
SNX6-210ENST00000557341 PRAMEF4O60810 478 aa13.21□□□□□ -0.29
SNX6-210ENST00000557341 ITGA10O75578 1167 aa13.21□□□□□ -0.29
SNX6-210ENST00000557341 C1QAP02745 245 aa13.21□□□□□ -0.29
SNX6-210ENST00000557341 CD22P20273 847 aa13.21□□□□□ -0.29
SNX6-210ENST00000557341 AGAP20933 346 aa13.21□□□□□ -0.29
SNX6-210ENST00000557341 HTR1EP28566 365 aa13.21□□□□□ -0.29
SNX6-210ENST00000557341 GRNP28799 593 aaKnown RBP13.21□□□□□ -0.29
SNX6-210ENST00000557341 TNFRSF8P28908 595 aa13.21□□□□□ -0.29
SNX6-210ENST00000557341 PPP2R1BP30154 601 aa13.21□□□□□ -0.29
SNX6-210ENST00000557341 MEOX1P50221 254 aa13.21□□□□□ -0.29
SNX6-210ENST00000557341 SMSP52788 366 aa13.21□□□□□ -0.29
SNX6-210ENST00000557341 PLTPP55058 493 aa13.21□□□□□ -0.29
SNX6-210ENST00000557341 LIM2P55344 173 aa13.21□□□□□ -0.29
SNX6-210ENST00000557341 GPX6P59796 221 aa13.21□□□□□ -0.29
SNX6-210ENST00000557341 ADORA2A-AS1P86434 159 aa13.21□□□□□ -0.29
SNX6-210ENST00000557341 IRF8Q02556 426 aa13.21□□□□□ -0.29
SNX6-210ENST00000557341 ELAVL1Q15717 326 aaKnown RBP13.21□□□□□ -0.29
SNX6-210ENST00000557341 HIST2H2ACQ16777 129 aaPredicted RBP13.21□□□□□ -0.29
SNX6-210ENST00000557341 KBTBD12Q3ZCT8 623 aa13.21□□□□□ -0.29
SNX6-210ENST00000557341 PRAMEF9Q5VWM5 478 aa13.21□□□□□ -0.29
SNX6-210ENST00000557341 HIST2H2AA3Q6FI13 130 aa13.21□□□□□ -0.29
SNX6-210ENST00000557341 CLNKQ7Z7G1 428 aa13.21□□□□□ -0.29
SNX6-210ENST00000557341 CMC1Q7Z7K0 106 aa13.21□□□□□ -0.29
SNX6-210ENST00000557341 TBC1D1Q86TI0 1168 aaPredicted RBP13.21□□□□□ -0.29
SNX6-210ENST00000557341 CCDC25Q86WR0 208 aa13.21□□□□□ -0.29
SNX6-210ENST00000557341 PPM1NQ8N819 430 aa13.21□□□□□ -0.29
SNX6-210ENST00000557341 SRFBP1Q8NEF9 429 aaKnown RBP13.21□□□□□ -0.29
SNX6-210ENST00000557341 STAG3L4Q8TBR4 150 aa13.21□□□□□ -0.29
SNX6-210ENST00000557341 NCLNQ969V3 563 aa13.21□□□□□ -0.29
SNX6-210ENST00000557341 CD244Q9BZW8 370 aa13.21□□□□□ -0.29
SNX6-210ENST00000557341 ROGDIQ9GZN7 287 aa13.21□□□□□ -0.29
SNX6-210ENST00000557341 ALG9Q9H6U8 611 aa13.21□□□□□ -0.29
SNX6-210ENST00000557341 PRM3Q9NNZ6 103 aa13.21□□□□□ -0.29
SNX6-210ENST00000557341 ZNF223Q9UK11 482 aaPredicted RBP13.21□□□□□ -0.29
SNX6-210ENST00000557341 ZNF490Q9ULM2 529 aaPredicted RBP13.21□□□□□ -0.29
SNX6-210ENST00000557341 MEMO1Q9Y316 297 aa13.21□□□□□ -0.29
SNX6-210ENST00000557341 CLDN16Q9Y5I7 305 aa13.21□□□□□ -0.29
SNX6-210ENST00000557341 HCFC1P51610 2035 aa13.21□□□□□ -0.29
SNX6-210ENST00000557341 OTOGQ6ZRI0 2925 aa13.2□□□□□ -0.3
SNX6-210ENST00000557341 ARHGAP21Q5T5U3 1957 aa13.2□□□□□ -0.3
SNX6-210ENST00000557341 CYR61O00622 381 aa13.2□□□□□ -0.3
SNX6-210ENST00000557341 ZFAND5O76080 213 aa13.2□□□□□ -0.3
SNX6-210ENST00000557341 SLC35E2BP0CK96 405 aa13.2□□□□□ -0.3
SNX6-210ENST00000557341 PRF1P14222 555 aa13.2□□□□□ -0.3
SNX6-210ENST00000557341 EPORP19235 508 aa13.2□□□□□ -0.3
SNX6-210ENST00000557341 CASQ1P31415 396 aa13.2□□□□□ -0.3
SNX6-210ENST00000557341 PTGER4P35408 488 aa13.2□□□□□ -0.3
SNX6-210ENST00000557341 MSH2P43246 934 aa13.2□□□□□ -0.3
SNX6-210ENST00000557341 SSR4P51571 173 aa13.2□□□□□ -0.3
SNX6-210ENST00000557341 HSF1Q00613 529 aa13.2□□□□□ -0.3
SNX6-210ENST00000557341 CHIT1Q13231 466 aa13.2□□□□□ -0.3
SNX6-210ENST00000557341 NAB1Q13506 487 aa13.2□□□□□ -0.3
SNX6-210ENST00000557341 E2F2Q14209 437 aa13.2□□□□□ -0.3
SNX6-210ENST00000557341 EFTUD2Q15029 972 aaKnown RBP eCLIP13.2□□□□□ -0.34e-7■■■□□ 19.2
SNX6-210ENST00000557341 TBCCQ15814 346 aa13.2□□□□□ -0.3
SNX6-210ENST00000557341 ZNF630Q2M218 657 aaPredicted RBP13.2□□□□□ -0.3
SNX6-210ENST00000557341 RNFT1Q5M7Z0 435 aa13.2□□□□□ -0.3
SNX6-210ENST00000557341 MCEMP1Q8IX19 187 aa13.2□□□□□ -0.3
SNX6-210ENST00000557341 EID3Q8N140 333 aa13.2□□□□□ -0.3
SNX6-210ENST00000557341 TMEM132CQ8N3T6 1108 aa13.2□□□□□ -0.3
SNX6-210ENST00000557341 FBXO25Q8TCJ0 367 aa13.2□□□□□ -0.3
SNX6-210ENST00000557341 DAZLQ92904 295 aaKnown RBP13.2□□□□□ -0.3
SNX6-210ENST00000557341 UBE2E3Q969T4 207 aa13.2□□□□□ -0.3
SNX6-210ENST00000557341 MS4A8Q9BY19 250 aa13.2□□□□□ -0.3
SNX6-210ENST00000557341 LYRM4Q9HD34 91 aa13.2□□□□□ -0.3
SNX6-210ENST00000557341 ASB1Q9Y576 335 aa13.2□□□□□ -0.3
SNX6-210ENST00000557341 CLCA3PQ9Y6N3 262 aa13.2□□□□□ -0.3
SNX6-210ENST00000557341 SPACA6W5XKT8 324 aa13.2□□□□□ -0.3
SNX6-210ENST00000557341 PDZD2O15018 2839 aa13.2□□□□□ -0.3
SNX6-210ENST00000557341 NCKAP5O14513 1909 aa13.19□□□□□ -0.3
SNX6-210ENST00000557341 SUPT3HB4E1H0 165 aa13.19□□□□□ -0.3
SNX6-210ENST00000557341 PRRG2O14669 202 aa13.19□□□□□ -0.3
SNX6-210ENST00000557341 KERAO60938 352 aa13.19□□□□□ -0.3
SNX6-210ENST00000557341 SUPT3HO75486 399 aa13.19□□□□□ -0.3
SNX6-210ENST00000557341 FAM155BO75949 473 aa13.19□□□□□ -0.3
SNX6-210ENST00000557341 TUBB4AP04350 444 aa13.19□□□□□ -0.3
SNX6-210ENST00000557341 IFNA16P05015 189 aa13.19□□□□□ -0.3
SNX6-210ENST00000557341 LTA4HP09960 611 aaKnown RBP13.19□□□□□ -0.3
SNX6-210ENST00000557341 CRABP2P29373 138 aa13.19□□□□□ -0.3
SNX6-210ENST00000557341 SERPINB1P30740 379 aa13.19□□□□□ -0.3
SNX6-210ENST00000557341 GMPRP36959 345 aa13.19□□□□□ -0.3
SNX6-210ENST00000557341 CASP2P42575 452 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms