RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 PPIL1Q9Y3C6 166 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 SH3BP1Q9Y3L3 701 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 PCDHGB3Q9Y5G1 929 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 MYO16Q9Y6X6 1858 aa5.88□□□□□ -1.47
CPSF2-205ENST00000556622 A0A0J9YVX5 310 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 FAM149AA5PLN7 773 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 CACNB4O00305 520 aaPredicted RBP5.87□□□□□ -1.47
CPSF2-205ENST00000556622 OR7A17O14581 309 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 BCKDKO14874 412 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 HS6ST1O60243 411 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 TBL1XO60907 577 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 MOSPD3O75425 235 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 JRKO75564 520 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 PRKD3O94806 890 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 SNAP29O95721 258 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 CATP04040 527 aaKnown RBP5.87□□□□□ -1.47
CPSF2-205ENST00000556622 FABP3P05413 133 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 ABCB1P08183 1280 aaPredicted RBP5.87□□□□□ -1.47
CPSF2-205ENST00000556622 MTHFD1P11586 935 aaKnown RBP5.87□□□□□ -1.47
CPSF2-205ENST00000556622 ANXA8P13928 327 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 PORP16435 677 aaPredicted RBP5.87□□□□□ -1.47
CPSF2-205ENST00000556622 HMGA1P17096 107 aaKnown RBP5.87□□□□□ -1.47
CPSF2-205ENST00000556622 ATF6P18850 670 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 IGFBP5P24593 272 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 AVPR2P30518 371 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 SERPINB1P30740 379 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 SOX6P35712 828 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 VIPR2P41587 438 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 MAGEA8P43361 318 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 ANXA11P50995 505 aaKnown RBP5.87□□□□□ -1.47
CPSF2-205ENST00000556622 SMIM11AP58511 58 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 DEFA1P59665 94 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 DEFA3P59666 94 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 PPP2R2BQ00005 443 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 NFATC3Q12968 1075 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 TRAF3Q13114 568 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 PMS2P3Q13401 168 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 ABRAXAS2Q15018 415 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 NEDD8Q15843 81 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 TRIM16LQ309B1 348 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 RFTN2Q52LD8 501 aaPredicted RBP5.87□□□□□ -1.47
CPSF2-205ENST00000556622 USP39Q53GS9 565 aaKnown RBP5.87□□□□□ -1.47
CPSF2-205ENST00000556622 CTSL3PQ5NE16 218 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 LDLRAP1Q5SW96 308 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 ZNF691Q5VV52 312 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 OR2T5Q6IEZ7 315 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 TRIM40Q6P9F5 258 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 BRAT1Q6PJG6 821 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 SLC2A7Q6PXP3 512 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 TEPPQ6URK8 271 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 SBSNQ6UWP8 590 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 UNC5DQ6UXZ4 953 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 LIPIQ6XZB0 460 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 Q6ZNX1 250 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 HTR3DQ70Z44 454 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 UBE2R2Q712K3 238 aaPredicted RBP5.87□□□□□ -1.47
CPSF2-205ENST00000556622 GAREM2Q75VX8 874 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 BMP8AQ7Z5Y6 402 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 ADCK1Q86TW2 530 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 TMC8Q8IU68 726 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 FAM217AQ8IXS0 508 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 CFAP52Q8N1V2 620 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 LIX1Q8N485 282 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 LINC00471Q8N535 108 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 FAM26EQ8N5C1 309 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 L3MBTL4Q8NA19 623 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 SLC16A11Q8NCK7 471 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 ZNF548Q8NEK5 533 aaPredicted RBP5.87□□□□□ -1.47
CPSF2-205ENST00000556622 OR2AP1Q8NGE2 309 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 OR8J2Q8NGG1 315 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 OR2T29Q8NH02 315 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 OR10A6Q8NH74 314 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 C9orf43Q8TAL5 461 aaPredicted RBP5.87□□□□□ -1.47
CPSF2-205ENST00000556622 FIBINQ8TAL6 211 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 GIPC3Q8TF64 312 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 RASSF5Q8WWW0 418 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 ABTB1Q969K4 478 aaPredicted RBP5.87□□□□□ -1.47
CPSF2-205ENST00000556622 ELSPBP1Q96BH3 223 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 MTERF3Q96E29 417 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 MOCOSQ96EN8 888 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 PLEKHA8Q96JA3 519 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 ZNF514Q96K75 400 aaPredicted RBP5.87□□□□□ -1.47
CPSF2-205ENST00000556622 Q96MT0 163 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 PANX1Q96RD7 426 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 KCNA7Q96RP8 456 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 EPYCQ99645 322 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 SLC46A2Q9BY10 475 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 PLA2G2FQ9BZM2 168 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 BRD9Q9H8M2 597 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 SIAEQ9HAT2 523 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 FANCEQ9HB96 536 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 PREBQ9HCU5 417 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 CCDC177Q9NQR7 707 aaPredicted RBP5.87□□□□□ -1.47
CPSF2-205ENST00000556622 AASDHPPTQ9NRN7 309 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 DNAJC11Q9NVH1 559 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 TBC1D14Q9P2M4 693 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 VPS29Q9UBQ0 182 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 ZNF282Q9UDV7 671 aaPredicted RBP5.87□□□□□ -1.47
CPSF2-205ENST00000556622 BTNL2Q9UIR0 455 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 CA14Q9ULX7 337 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms