RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 RPS13P62277 151 aaKnown RBP10.81□□□□□ -0.68
SLIRP-206ENST00000556375 HERVK_113P63132 956 aa10.81□□□□□ -0.68
SLIRP-206ENST00000556375 TERF2Q15554 542 aa10.81□□□□□ -0.68
SLIRP-206ENST00000556375 ZRSR2Q15696 482 aaKnown RBP10.81□□□□□ -0.68
SLIRP-206ENST00000556375 AP5B1Q2VPB7 878 aa10.81□□□□□ -0.68
SLIRP-206ENST00000556375 PLEKHN1Q494U1 663 aaPredicted RBP10.81□□□□□ -0.68
SLIRP-206ENST00000556375 PRR30Q53SZ7 412 aaPredicted RBP10.81□□□□□ -0.68
SLIRP-206ENST00000556375 ABHD17BQ5VST6 288 aa10.81□□□□□ -0.68
SLIRP-206ENST00000556375 B3GNTL1Q67FW5 361 aaPredicted RBP10.81□□□□□ -0.68
SLIRP-206ENST00000556375 H3F3CQ6NXT2 135 aa10.81□□□□□ -0.68
SLIRP-206ENST00000556375 WDR93Q6P2C0 686 aa10.81□□□□□ -0.68
SLIRP-206ENST00000556375 CUZD1Q86UP6 607 aa10.81□□□□□ -0.68
SLIRP-206ENST00000556375 ATCAYQ86WG3 371 aa10.81□□□□□ -0.68
SLIRP-206ENST00000556375 RNF175Q8N4F7 328 aa10.81□□□□□ -0.68
SLIRP-206ENST00000556375 EFCAB3Q8N7B9 438 aa10.81□□□□□ -0.68
SLIRP-206ENST00000556375 ACOT4Q8N9L9 421 aa10.81□□□□□ -0.68
SLIRP-206ENST00000556375 TMEM52Q8NDY8 209 aa10.81□□□□□ -0.68
SLIRP-206ENST00000556375 WDR20Q8TBZ3 569 aa10.81□□□□□ -0.68
SLIRP-206ENST00000556375 EPS8L3Q8TE67 593 aaKnown RBP10.81□□□□□ -0.68
SLIRP-206ENST00000556375 RGMAQ96B86 450 aa10.81□□□□□ -0.68
SLIRP-206ENST00000556375 CNDP1Q96KN2 507 aa10.81□□□□□ -0.68
SLIRP-206ENST00000556375 MAGEB10Q96LZ2 347 aaPredicted RBP10.81□□□□□ -0.68
SLIRP-206ENST00000556375 CDK15Q96Q40 435 aa10.81□□□□□ -0.68
SLIRP-206ENST00000556375 CSF3RQ99062 836 aa10.81□□□□□ -0.68
SLIRP-206ENST00000556375 ERVK-6Q9BXR3 956 aa10.81□□□□□ -0.68
SLIRP-206ENST00000556375 CLMPQ9H6B4 373 aa10.81□□□□□ -0.68
SLIRP-206ENST00000556375 SEMA4BQ9NPR2 832 aaPredicted RBP10.81□□□□□ -0.68
SLIRP-206ENST00000556375 NECTIN3Q9NQS3 549 aa10.81□□□□□ -0.68
SLIRP-206ENST00000556375 PRTFDC1Q9NRG1 225 aa10.81□□□□□ -0.68
SLIRP-206ENST00000556375 PSD3Q9NYI0 1048 aa10.81□□□□□ -0.68
SLIRP-206ENST00000556375 DCDC2Q9UHG0 476 aa10.81□□□□□ -0.68
SLIRP-206ENST00000556375 PLAAQ9Y263 795 aa10.81□□□□□ -0.68
SLIRP-206ENST00000556375 SPACA6W5XKT8 324 aa10.81□□□□□ -0.68
SLIRP-206ENST00000556375 A0A1W2PPM1 405 aa10.8□□□□□ -0.68
SLIRP-206ENST00000556375 BLACEA4D250 179 aa10.8□□□□□ -0.68
SLIRP-206ENST00000556375 SMIM23A6NLE4 172 aa10.8□□□□□ -0.68
SLIRP-206ENST00000556375 FOXE1O00358 373 aaPredicted RBP10.8□□□□□ -0.68
SLIRP-206ENST00000556375 SAP18O00422 153 aaKnown RBP10.8□□□□□ -0.68
SLIRP-206ENST00000556375 PLPP1O14494 284 aa10.8□□□□□ -0.68
SLIRP-206ENST00000556375 DLX3O60479 287 aa10.8□□□□□ -0.68
SLIRP-206ENST00000556375 SEMA3DO95025 777 aa10.8□□□□□ -0.68
SLIRP-206ENST00000556375 NUDT17P0C025 328 aa10.8□□□□□ -0.68
SLIRP-206ENST00000556375 KRT15P19012 456 aa10.8□□□□□ -0.68
SLIRP-206ENST00000556375 PTX3P26022 381 aaPredicted RBP10.8□□□□□ -0.68
SLIRP-206ENST00000556375 TAS2R50P59544 299 aa10.8□□□□□ -0.68
SLIRP-206ENST00000556375 ARG2P78540 354 aa10.8□□□□□ -0.68
SLIRP-206ENST00000556375 KCNC4Q03721 635 aa10.8□□□□□ -0.68
SLIRP-206ENST00000556375 ZNF33BQ06732 778 aa10.8□□□□□ -0.68
SLIRP-206ENST00000556375 SLC13A2Q13183 592 aa10.8□□□□□ -0.68
SLIRP-206ENST00000556375 CUL3Q13618 768 aa10.8□□□□□ -0.68
SLIRP-206ENST00000556375 ZNF169Q14929 603 aaPredicted RBP10.8□□□□□ -0.68
SLIRP-206ENST00000556375 TLR1Q15399 786 aa10.8□□□□□ -0.68
SLIRP-206ENST00000556375 INPP5JQ15735 1006 aaPredicted RBP10.8□□□□□ -0.68
SLIRP-206ENST00000556375 IGFBP7Q16270 282 aa10.8□□□□□ -0.68
SLIRP-206ENST00000556375 FRG2Q64ET8 278 aa10.8□□□□□ -0.68
SLIRP-206ENST00000556375 OR4C11Q6IEV9 310 aa10.8□□□□□ -0.68
SLIRP-206ENST00000556375 EMBQ6PCB8 327 aa10.8□□□□□ -0.68
SLIRP-206ENST00000556375 RPS27LQ71UM5 84 aaKnown RBP10.8□□□□□ -0.68
SLIRP-206ENST00000556375 SLC22A9Q8IVM8 553 aa10.8□□□□□ -0.68
SLIRP-206ENST00000556375 CYP4X1Q8N118 509 aa10.8□□□□□ -0.68
SLIRP-206ENST00000556375 LGI4Q8N135 537 aa10.8□□□□□ -0.68
SLIRP-206ENST00000556375 ZCCHC7Q8N3Z6 543 aaKnown RBP10.8□□□□□ -0.68
SLIRP-206ENST00000556375 AMER2Q8N7J2 671 aa10.8□□□□□ -0.68
SLIRP-206ENST00000556375 OR4F6Q8NGB9 312 aa10.8□□□□□ -0.68
SLIRP-206ENST00000556375 DNAJB14Q8TBM8 379 aa10.8□□□□□ -0.68
SLIRP-206ENST00000556375 AENQ8WTP8 325 aaKnown RBP10.8□□□□□ -0.68
SLIRP-206ENST00000556375 TMEM237Q96Q45 408 aa10.8□□□□□ -0.68
SLIRP-206ENST00000556375 FRG2BQ96QU4 278 aa10.8□□□□□ -0.68
SLIRP-206ENST00000556375 MAPKAP1Q9BPZ7 522 aa10.8□□□□□ -0.68
SLIRP-206ENST00000556375 KCNK13Q9HB14 408 aa10.8□□□□□ -0.68
SLIRP-206ENST00000556375 KCMF1Q9P0J7 381 aa10.8□□□□□ -0.68
SLIRP-206ENST00000556375 PHF11Q9UIL8 331 aa10.8□□□□□ -0.68
SLIRP-206ENST00000556375 CLDN16Q9Y5I7 305 aa10.8□□□□□ -0.68
SLIRP-206ENST00000556375 RELNP78509 3460 aa10.8□□□□□ -0.68
SLIRP-206ENST00000556375 ASH1LQ9NR48 2969 aaKnown RBP10.79□□□□□ -0.68
SLIRP-206ENST00000556375 TGFBR3LH3BV60 316 aa10.79□□□□□ -0.68
SLIRP-206ENST00000556375 CTNSO60931 367 aa10.79□□□□□ -0.68
SLIRP-206ENST00000556375 ETHE1O95571 254 aa10.79□□□□□ -0.68
SLIRP-206ENST00000556375 TNFSF10P50591 281 aa10.79□□□□□ -0.68
SLIRP-206ENST00000556375 NEK2P51955 445 aa10.79□□□□□ -0.68
SLIRP-206ENST00000556375 PRKAA2P54646 552 aa10.79□□□□□ -0.68
SLIRP-206ENST00000556375 CDH13P55290 713 aa10.79□□□□□ -0.68
SLIRP-206ENST00000556375 CLCQ05315 142 aa10.79□□□□□ -0.68
SLIRP-206ENST00000556375 IFT88Q13099 833 aa10.79□□□□□ -0.68
SLIRP-206ENST00000556375 ZNF678Q5SXM1 525 aa10.79□□□□□ -0.68
SLIRP-206ENST00000556375 TTC19Q6DKK2 380 aaPredicted RBP10.79□□□□□ -0.68
SLIRP-206ENST00000556375 LETMD1Q6P1Q0 360 aa10.79□□□□□ -0.68
SLIRP-206ENST00000556375 SH2D5Q6ZV89 423 aa10.79□□□□□ -0.68
SLIRP-206ENST00000556375 MILR1Q7Z6M3 343 aa10.79□□□□□ -0.68
SLIRP-206ENST00000556375 CLNKQ7Z7G1 428 aa10.79□□□□□ -0.68
SLIRP-206ENST00000556375 NUDT13Q86X67 352 aa10.79□□□□□ -0.68
SLIRP-206ENST00000556375 RIBC1Q8N443 379 aaPredicted RBP10.79□□□□□ -0.68
SLIRP-206ENST00000556375 SLC5A8Q8N695 610 aa10.79□□□□□ -0.68
SLIRP-206ENST00000556375 GALNT11Q8NCW6 608 aa10.79□□□□□ -0.68
SLIRP-206ENST00000556375 NFAM1Q8NET5 270 aaPredicted RBP10.79□□□□□ -0.68
SLIRP-206ENST00000556375 MYRIPQ8NFW9 859 aa10.79□□□□□ -0.68
SLIRP-206ENST00000556375 ELP5Q8TE02 316 aa10.79□□□□□ -0.68
SLIRP-206ENST00000556375 HAS2Q92819 552 aa10.79□□□□□ -0.68
SLIRP-206ENST00000556375 CAVIN3Q969G5 261 aa10.79□□□□□ -0.68
SLIRP-206ENST00000556375 CCDC126Q96EE4 140 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms