RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 ALDH6A1Q02252 535 aaKnown RBP22.85■■□□□ 1.25
PRKCH-216ENST00000555542 DDX39BQ13838 428 aaKnown RBP22.85■■□□□ 1.25
PRKCH-216ENST00000555542 ACAP2Q15057 778 aa22.85■■□□□ 1.25
PRKCH-216ENST00000555542 TERF2Q15554 542 aa22.85■■□□□ 1.25
PRKCH-216ENST00000555542 PFKFB4Q16877 469 aa22.85■■□□□ 1.25
PRKCH-216ENST00000555542 CHSY3Q70JA7 882 aa22.85■■□□□ 1.25
PRKCH-216ENST00000555542 GALNTL5Q7Z4T8 443 aa22.85■■□□□ 1.25
PRKCH-216ENST00000555542 MMGT1Q8N4V1 131 aa22.85■■□□□ 1.25
PRKCH-216ENST00000555542 TMEM52Q8NDY8 209 aa22.85■■□□□ 1.25
PRKCH-216ENST00000555542 TMEM125Q96AQ2 219 aa22.85■■□□□ 1.25
PRKCH-216ENST00000555542 SCMH1Q96GD3 660 aa22.85■■□□□ 1.25
PRKCH-216ENST00000555542 CSF3RQ99062 836 aa22.85■■□□□ 1.25
PRKCH-216ENST00000555542 CCDC77Q9BR77 488 aa22.85■■□□□ 1.25
PRKCH-216ENST00000555542 TBCDQ9BTW9 1192 aa22.85■■□□□ 1.25
PRKCH-216ENST00000555542 MS4A8Q9BY19 250 aa22.85■■□□□ 1.25
PRKCH-216ENST00000555542 ACSS3Q9H6R3 686 aa22.85■■□□□ 1.25
PRKCH-216ENST00000555542 SLC25A12O75746 678 aa22.84■■□□□ 1.25
PRKCH-216ENST00000555542 KLHL2O95198 593 aa22.84■■□□□ 1.25
PRKCH-216ENST00000555542 TGFB1P01137 390 aa22.84■■□□□ 1.25
PRKCH-216ENST00000555542 SP1P08047 785 aa22.84■■□□□ 1.25
PRKCH-216ENST00000555542 INHBAP08476 426 aa22.84■■□□□ 1.25
PRKCH-216ENST00000555542 CTAGE8P0CG41 777 aa22.84■■□□□ 1.25
PRKCH-216ENST00000555542 PPP2R1BP30154 601 aa22.84■■□□□ 1.25
PRKCH-216ENST00000555542 SERPINB1P30740 379 aa22.84■■□□□ 1.25
PRKCH-216ENST00000555542 CASP2P42575 452 aa22.84■■□□□ 1.25
PRKCH-216ENST00000555542 SSR2P43308 183 aa22.84■■□□□ 1.25
PRKCH-216ENST00000555542 STX4Q12846 297 aa22.84■■□□□ 1.25
PRKCH-216ENST00000555542 AP5B1Q2VPB7 878 aa22.84■■□□□ 1.25
PRKCH-216ENST00000555542 TMEM35AQ53FP2 167 aa22.84■■□□□ 1.25
PRKCH-216ENST00000555542 SLC25A25Q6KCM7 469 aa22.84■■□□□ 1.25
PRKCH-216ENST00000555542 CTAGE4Q8IX94 777 aa22.84■■□□□ 1.25
PRKCH-216ENST00000555542 ZNF473Q8WTR7 871 aaKnown RBP22.84■■□□□ 1.25
PRKCH-216ENST00000555542 VMP1Q96GC9 406 aa22.84■■□□□ 1.25
PRKCH-216ENST00000555542 FMO2Q99518 471 aa22.84■■□□□ 1.25
PRKCH-216ENST00000555542 CDC42EP4Q9H3Q1 356 aaKnown RBP22.84■■□□□ 1.25
PRKCH-216ENST00000555542 ADAP2Q9NPF8 381 aa22.84■■□□□ 1.25
PRKCH-216ENST00000555542 PRDM7Q9NQW5 492 aa22.84■■□□□ 1.25
PRKCH-216ENST00000555542 CPSF2Q9P2I0 782 aaKnown RBP22.84■■□□□ 1.25
PRKCH-216ENST00000555542 SH3BGRL2Q9UJC5 107 aa22.84■■□□□ 1.25
PRKCH-216ENST00000555542 POLEQ07864 2286 aa22.83■■□□□ 1.25
PRKCH-216ENST00000555542 CCDC189A1A4V9 331 aa22.83■■□□□ 1.25
PRKCH-216ENST00000555542 SYNDIG1LA6NDD5 238 aa22.83■■□□□ 1.25
PRKCH-216ENST00000555542 SAP18O00422 153 aaKnown RBP22.83■■□□□ 1.25
PRKCH-216ENST00000555542 RTCAO00442 366 aaKnown RBP22.83■■□□□ 1.25
PRKCH-216ENST00000555542 CDK2AP1O14519 115 aa22.83■■□□□ 1.25
PRKCH-216ENST00000555542 ZG16O60844 167 aa22.83■■□□□ 1.25
PRKCH-216ENST00000555542 NEURL1O76050 574 aa22.83■■□□□ 1.25
PRKCH-216ENST00000555542 COL8A1P27658 744 aa22.83■■□□□ 1.25
PRKCH-216ENST00000555542 RAP1GDS1P52306 607 aa22.83■■□□□ 1.25
PRKCH-216ENST00000555542 CASP6P55212 293 aa22.83■■□□□ 1.25
PRKCH-216ENST00000555542 SETDB1Q15047 1291 aa22.83■■□□□ 1.25
PRKCH-216ENST00000555542 ZNF468Q5VIY5 522 aaPredicted RBP22.83■■□□□ 1.25
PRKCH-216ENST00000555542 GRHL2Q6ISB3 625 aa22.83■■□□□ 1.25
PRKCH-216ENST00000555542 TAOK1Q7L7X3 1001 aa22.83■■□□□ 1.25
PRKCH-216ENST00000555542 LAS2Q8IYD9 372 aa22.83■■□□□ 1.25
PRKCH-216ENST00000555542 NOA1Q8NC60 698 aaKnown RBP22.83■■□□□ 1.25
PRKCH-216ENST00000555542 APCDD1LQ8NCL9 501 aa22.83■■□□□ 1.25
PRKCH-216ENST00000555542 OR7G3Q8NG95 312 aa22.83■■□□□ 1.25
PRKCH-216ENST00000555542 NCLNQ969V3 563 aa22.83■■□□□ 1.25
PRKCH-216ENST00000555542 CMTM7Q96FZ5 175 aa22.83■■□□□ 1.25
PRKCH-216ENST00000555542 CENPKQ9BS16 269 aa22.83■■□□□ 1.25
PRKCH-216ENST00000555542 TSPAN10Q9H1Z9 355 aaPredicted RBP22.83■■□□□ 1.25
PRKCH-216ENST00000555542 ACTR8Q9H981 624 aa22.83■■□□□ 1.25
PRKCH-216ENST00000555542 LYRM4Q9HD34 91 aa22.83■■□□□ 1.25
PRKCH-216ENST00000555542 DMGDHQ9UI17 866 aaKnown RBP22.83■■□□□ 1.25
PRKCH-216ENST00000555542 CLCA3PQ9Y6N3 262 aa22.83■■□□□ 1.25
PRKCH-216ENST00000555542 HMX2A2RU54 273 aa22.82■■□□□ 1.24
PRKCH-216ENST00000555542 TGFBR3LH3BV60 316 aa22.82■■□□□ 1.24
PRKCH-216ENST00000555542 CYR61O00622 381 aa22.82■■□□□ 1.24
PRKCH-216ENST00000555542 MTHFD2P13995 350 aa22.82■■□□□ 1.24
PRKCH-216ENST00000555542 ATP5A1P25705 553 aaKnown RBP22.82■■□□□ 1.24
PRKCH-216ENST00000555542 ARL1P40616 181 aaPredicted RBP22.82■■□□□ 1.24
PRKCH-216ENST00000555542 ALDH18A1P54886 795 aaKnown RBP22.82■■□□□ 1.24
PRKCH-216ENST00000555542 PHEXP78562 749 aa22.82■■□□□ 1.24
PRKCH-216ENST00000555542 NAA30Q147X3 362 aaPredicted RBP22.82■■□□□ 1.24
PRKCH-216ENST00000555542 UBAP2Q5T6F2 1119 aaKnown RBP22.82■■□□□ 1.24
PRKCH-216ENST00000555542 PNPLA5Q7Z6Z6 429 aaPredicted RBP22.82■■□□□ 1.24
PRKCH-216ENST00000555542 TMEM132CQ8N3T6 1108 aa22.82■■□□□ 1.24
PRKCH-216ENST00000555542 TMEM156Q8N614 296 aa22.82■■□□□ 1.24
PRKCH-216ENST00000555542 ACOT4Q8N9L9 421 aa22.82■■□□□ 1.24
PRKCH-216ENST00000555542 SUCOQ9UBS9 1254 aaKnown RBP22.82■■□□□ 1.24
PRKCH-216ENST00000555542 ADGRE2Q9UHX3 823 aa22.82■■□□□ 1.24
PRKCH-216ENST00000555542 CROCCQ5TZA2 2017 aa22.81■■□□□ 1.24
PRKCH-216ENST00000555542 MYOCOSA0A1B0GUC4 107 aa22.81■■□□□ 1.24
PRKCH-216ENST00000555542 NPIPA5E9PKD4 350 aa22.81■■□□□ 1.24
PRKCH-216ENST00000555542 CTNSO60931 367 aa22.81■■□□□ 1.24
PRKCH-216ENST00000555542 ALDOAP04075 364 aaKnown RBP22.81■■□□□ 1.24
PRKCH-216ENST00000555542 TNNI3P19429 210 aa22.81■■□□□ 1.24
PRKCH-216ENST00000555542 HIST1H1TP22492 207 aaPredicted RBP22.81■■□□□ 1.24
PRKCH-216ENST00000555542 CPN2P22792 545 aa22.81■■□□□ 1.24
PRKCH-216ENST00000555542 HLCSP50747 726 aa22.81■■□□□ 1.24
PRKCH-216ENST00000555542 E2F2Q14209 437 aa22.81■■□□□ 1.24
PRKCH-216ENST00000555542 ELAVL1Q15717 326 aaKnown RBP22.81■■□□□ 1.24
PRKCH-216ENST00000555542 ZNF800Q2TB10 664 aaPredicted RBP eCLIP22.81■■□□□ 1.24
PRKCH-216ENST00000555542 KHDRBS2Q5VWX1 349 aaKnown RBP22.81■■□□□ 1.24
PRKCH-216ENST00000555542 ZNF793Q6ZN11 406 aa22.81■■□□□ 1.24
PRKCH-216ENST00000555542 RELL1Q8IUW5 271 aa22.81■■□□□ 1.24
PRKCH-216ENST00000555542 DAZLQ92904 295 aaKnown RBP22.81■■□□□ 1.24
PRKCH-216ENST00000555542 MAGED4Q96JG8 741 aa22.81■■□□□ 1.24
PRKCH-216ENST00000555542 FRMD6Q96NE9 622 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms