RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 LRRC8BQ6P9F7 803 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 KLHL35Q6PF15 583 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 NLRP9Q7RTR0 991 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 LDB1Q86U70 411 aaPredicted RBP3.99□□□□□ -1.77
VTI1B-203ENST00000554636 TRIM73Q86UV7 250 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 KMT5CQ86Y97 462 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 RASGRP3Q8IV61 690 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 ADGRF3Q8IZF5 1079 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 KRT222Q8N1A0 295 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 SLC35F6Q8N357 371 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 SIDT2Q8NBJ9 832 aaKnown RBP3.99□□□□□ -1.77
VTI1B-203ENST00000554636 ZBTB34Q8NCN2 500 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 PPHLN1Q8NEY8 458 aaKnown RBP3.99□□□□□ -1.77
VTI1B-203ENST00000554636 OR4E2Q8NGC2 313 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 OR5AR1Q8NGP9 310 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 OR4L1Q8NH43 312 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 CT55Q8WUE5 264 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 MAIP1Q8WWC4 291 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 STARD8Q92502 1023 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 TFGQ92734 400 aaPredicted RBP3.99□□□□□ -1.77
VTI1B-203ENST00000554636 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.99□□□□□ -1.77
VTI1B-203ENST00000554636 ZNF501Q96CX3 271 aaPredicted RBP3.99□□□□□ -1.77
VTI1B-203ENST00000554636 MS4A14Q96JA4 679 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 ELMO2Q96JJ3 720 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 RUFY1Q96T51 708 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 MACROD1Q9BQ69 325 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 PTDSS2Q9BVG9 487 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 KIFC1Q9BW19 673 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 AP1M1Q9BXS5 423 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 ULBP3Q9BZM4 244 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 IL22Q9GZX6 179 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 P2RY12Q9H244 342 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 TFB2MQ9H5Q4 396 aaKnown RBP3.99□□□□□ -1.77
VTI1B-203ENST00000554636 XKR8Q9H6D3 395 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 MVB12BQ9H7P6 319 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 GRPEL1Q9HAV7 217 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 ZIM2Q9NZV7 527 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 LNPEPQ9UIQ6 1025 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 RARRES3Q9UL19 164 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 NDRG4Q9ULP0 352 aaKnown RBP3.99□□□□□ -1.77
VTI1B-203ENST00000554636 TTC7AQ9ULT0 858 aaPredicted RBP3.99□□□□□ -1.77
VTI1B-203ENST00000554636 PLAGL1Q9UM63 463 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 MRPS18BQ9Y676 258 aaKnown RBP3.99□□□□□ -1.77
VTI1B-203ENST00000554636 RPS6KL1Q9Y6S9 549 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 COLEC10Q9Y6Z7 277 aa3.99□□□□□ -1.77
VTI1B-203ENST00000554636 NBASA2RRP1 2371 aa3.98□□□□□ -1.77
VTI1B-203ENST00000554636 ANKRD12Q6UB98 2062 aa3.98□□□□□ -1.77
VTI1B-203ENST00000554636 HEATR5BQ9P2D3 2071 aa3.98□□□□□ -1.77
VTI1B-203ENST00000554636 A0A1W2PPL8 197 aa3.98□□□□□ -1.77
VTI1B-203ENST00000554636 GSAPA4D1B5 854 aa3.98□□□□□ -1.77
VTI1B-203ENST00000554636 WDR91A4D1P6 747 aa3.98□□□□□ -1.77
VTI1B-203ENST00000554636 LINC01548A6NM66 108 aa3.98□□□□□ -1.77
VTI1B-203ENST00000554636 USP27XA6NNY8 438 aa3.98□□□□□ -1.77
VTI1B-203ENST00000554636 H3BMH7 237 aa3.98□□□□□ -1.77
VTI1B-203ENST00000554636 PGRMC1O00264 195 aaKnown RBP3.98□□□□□ -1.77
VTI1B-203ENST00000554636 PRMT5O14744 637 aaPredicted RBP3.98□□□□□ -1.77
VTI1B-203ENST00000554636 CD3EAPO15446 510 aaKnown RBP3.98□□□□□ -1.77
VTI1B-203ENST00000554636 GPC4O75487 556 aa3.98□□□□□ -1.77
VTI1B-203ENST00000554636 SLCO2B1O94956 709 aa3.98□□□□□ -1.77
VTI1B-203ENST00000554636 KRT14P02533 472 aa3.98□□□□□ -1.77
VTI1B-203ENST00000554636 MT-ND3P03897 115 aa3.98□□□□□ -1.77
VTI1B-203ENST00000554636 F7P08709 466 aaPredicted RBP3.98□□□□□ -1.77
VTI1B-203ENST00000554636 CHRM5P08912 532 aaPredicted RBP3.98□□□□□ -1.77
VTI1B-203ENST00000554636 OR56A5P0C7T3 313 aa3.98□□□□□ -1.77
VTI1B-203ENST00000554636 NHLRC4P0CG21 123 aaPredicted RBP3.98□□□□□ -1.77
VTI1B-203ENST00000554636 UGT2B7P16662 529 aa3.98□□□□□ -1.77
VTI1B-203ENST00000554636 CDH3P22223 829 aa3.98□□□□□ -1.77
VTI1B-203ENST00000554636 RPS3P23396 243 aaKnown RBP eCLIP3.98□□□□□ -1.77
VTI1B-203ENST00000554636 PRDX3P30048 256 aaKnown RBP3.98□□□□□ -1.77
VTI1B-203ENST00000554636 PPIFP30405 207 aaKnown RBP3.98□□□□□ -1.77
VTI1B-203ENST00000554636 SHMT2P34897 504 aa3.98□□□□□ -1.77
VTI1B-203ENST00000554636 RORAP35398 523 aa3.98□□□□□ -1.77
VTI1B-203ENST00000554636 DLSTP36957 453 aa3.98□□□□□ -1.77
VTI1B-203ENST00000554636 COILP38432 576 aaPredicted RBP3.98□□□□□ -1.77
VTI1B-203ENST00000554636 MAGEA3P43357 314 aa3.98□□□□□ -1.77
VTI1B-203ENST00000554636 BDKRB1P46663 353 aa3.98□□□□□ -1.77
VTI1B-203ENST00000554636 GABRA4P48169 554 aa3.98□□□□□ -1.77
VTI1B-203ENST00000554636 FNTAP49354 379 aa3.98□□□□□ -1.77
VTI1B-203ENST00000554636 TERF1P54274 439 aa3.98□□□□□ -1.77
VTI1B-203ENST00000554636 CSE1LP55060 971 aaKnown RBP3.98□□□□□ -1.77
VTI1B-203ENST00000554636 POLE2P56282 527 aa3.98□□□□□ -1.77
VTI1B-203ENST00000554636 EEFSECP57772 596 aaKnown RBP3.98□□□□□ -1.77
VTI1B-203ENST00000554636 TUBB4BP68371 445 aa3.98□□□□□ -1.77
VTI1B-203ENST00000554636 CDK16Q00536 496 aa3.98□□□□□ -1.77
VTI1B-203ENST00000554636 GPS1Q13098 491 aa3.98□□□□□ -1.77
VTI1B-203ENST00000554636 PRKAA1Q13131 559 aa3.98□□□□□ -1.77
VTI1B-203ENST00000554636 GPS2Q13227 327 aa3.98□□□□□ -1.77
VTI1B-203ENST00000554636 PRKG2Q13237 762 aa3.98□□□□□ -1.77
VTI1B-203ENST00000554636 DNASE1L3Q13609 305 aa3.98□□□□□ -1.77
VTI1B-203ENST00000554636 TUBB2AQ13885 445 aa3.98□□□□□ -1.77
VTI1B-203ENST00000554636 E2F2Q14209 437 aa3.98□□□□□ -1.77
VTI1B-203ENST00000554636 GRB7Q14451 532 aa3.98□□□□□ -1.77
VTI1B-203ENST00000554636 KRT33BQ14525 404 aa3.98□□□□□ -1.77
VTI1B-203ENST00000554636 GBX1Q14549 363 aa3.98□□□□□ -1.77
VTI1B-203ENST00000554636 BRD3Q15059 726 aa3.98□□□□□ -1.77
VTI1B-203ENST00000554636 TRIP13Q15645 432 aaPredicted RBP3.98□□□□□ -1.77
VTI1B-203ENST00000554636 ZIC1Q15915 447 aa3.98□□□□□ -1.77
VTI1B-203ENST00000554636 KYNUQ16719 465 aa3.98□□□□□ -1.77
VTI1B-203ENST00000554636 SYTL3Q4VX76 610 aa3.98□□□□□ -1.77
VTI1B-203ENST00000554636 FASTKD1Q53R41 847 aaKnown RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms