RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 CXCL2P19875 107 aa9.16□□□□□ -0.94
SIX4-202ENST00000554079 LCN1P31025 176 aa9.16□□□□□ -0.94
SIX4-202ENST00000554079 SDC2P34741 201 aa9.16□□□□□ -0.94
SIX4-202ENST00000554079 VEGFCP49767 419 aa9.16□□□□□ -0.94
SIX4-202ENST00000554079 GPR143P51810 404 aa9.16□□□□□ -0.94
SIX4-202ENST00000554079 PGDP52209 483 aa9.16□□□□□ -0.94
SIX4-202ENST00000554079 RBMS2Q15434 407 aaKnown RBP9.16□□□□□ -0.94
SIX4-202ENST00000554079 SPIN4Q56A73 249 aa9.16□□□□□ -0.94
SIX4-202ENST00000554079 ZNF789Q5FWF6 425 aa9.16□□□□□ -0.94
SIX4-202ENST00000554079 C3orf38Q5JPI3 329 aa9.16□□□□□ -0.94
SIX4-202ENST00000554079 OR2B11Q5JQS5 317 aa9.16□□□□□ -0.94
SIX4-202ENST00000554079 SEZ6L2Q6UXD5 910 aa9.16□□□□□ -0.94
SIX4-202ENST00000554079 LIX1Q8N485 282 aa9.16□□□□□ -0.94
SIX4-202ENST00000554079 BMPERQ8N8U9 685 aa9.16□□□□□ -0.94
SIX4-202ENST00000554079 CCNYQ8ND76 341 aa9.16□□□□□ -0.94
SIX4-202ENST00000554079 DENND6BQ8NEG7 585 aa9.16□□□□□ -0.94
SIX4-202ENST00000554079 MOSPD2Q8NHP6 518 aa9.16□□□□□ -0.94
SIX4-202ENST00000554079 PHOSPHO1Q8TCT1 267 aa9.16□□□□□ -0.94
SIX4-202ENST00000554079 C2CD4CQ8TF44 421 aa9.16□□□□□ -0.94
SIX4-202ENST00000554079 TRIM43Q96BQ3 446 aaPredicted RBP9.16□□□□□ -0.94
SIX4-202ENST00000554079 NARS2Q96I59 477 aaKnown RBP9.16□□□□□ -0.94
SIX4-202ENST00000554079 THUMPD3Q9BV44 507 aaKnown RBP9.16□□□□□ -0.94
SIX4-202ENST00000554079 SIK2Q9H0K1 926 aa9.16□□□□□ -0.94
SIX4-202ENST00000554079 ABHD16BQ9H3Z7 469 aa9.16□□□□□ -0.94
SIX4-202ENST00000554079 OSGEPL1Q9H4B0 414 aa9.16□□□□□ -0.94
SIX4-202ENST00000554079 TXNL4BQ9NX01 149 aaKnown RBP9.16□□□□□ -0.94
SIX4-202ENST00000554079 C1orf109Q9NX04 203 aa9.16□□□□□ -0.94
SIX4-202ENST00000554079 THUMPD1Q9NXG2 353 aaKnown RBP9.16□□□□□ -0.94
SIX4-202ENST00000554079 CCNL1Q9UK58 526 aaPredicted RBP9.16□□□□□ -0.94
SIX4-202ENST00000554079 SSR3Q9UNL2 185 aa9.16□□□□□ -0.94
SIX4-202ENST00000554079 TRBV5-3A0A0A0MS03 114 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 H0YCG3 227 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 ADAM12O43184 909 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 CSO75390 466 aaKnown RBP9.15□□□□□ -0.94
SIX4-202ENST00000554079 AP2A2O94973 939 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 OAZ2O95190 189 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 POMCP01189 267 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 VTNP04004 478 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 PFKMP08237 780 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 ODC1P11926 461 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 MUC1P15941 1255 aaPredicted RBP9.15□□□□□ -0.94
SIX4-202ENST00000554079 SMPD1P17405 629 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 ERCC2P18074 760 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 PVALBP20472 110 aaPredicted RBP9.15□□□□□ -0.94
SIX4-202ENST00000554079 PSMA1P25786 263 aaKnown RBP9.15□□□□□ -0.94
SIX4-202ENST00000554079 TNFSF9P41273 254 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 PTGFRP43088 359 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 ARSDP51689 593 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 MC2RQ01718 297 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 MAP4K2Q12851 820 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 ERV3-1Q14264 604 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 USP39Q53GS9 565 aaKnown RBP9.15□□□□□ -0.94
SIX4-202ENST00000554079 C6orf136Q5SQH8 315 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 STRIP1Q5VSL9 837 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 ANKS6Q68DC2 871 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 ZNF57Q68EA5 555 aaPredicted RBP9.15□□□□□ -0.94
SIX4-202ENST00000554079 FAM109BQ6ICB4 259 aaPredicted RBP9.15□□□□□ -0.94
SIX4-202ENST00000554079 EFCAB12Q6NXP0 572 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 ZNF549Q6P9A3 640 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 AFTPHQ6ULP2 937 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 ZNF730Q6ZMV8 503 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 TMEM91Q6ZNR0 172 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 MAMDC2Q7Z304 686 aaPredicted RBP9.15□□□□□ -0.94
SIX4-202ENST00000554079 PDZD3Q86UT5 571 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 SLC51AQ86UW1 340 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 TRIM69Q86WT6 500 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 C10orf111Q8N326 155 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 GMCL1P1Q8NEA9 526 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 TMEM163Q8TC26 289 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 CNOT9Q92600 299 aaKnown RBP9.15□□□□□ -0.94
SIX4-202ENST00000554079 CENPIQ92674 756 aaPredicted RBP9.15□□□□□ -0.94
SIX4-202ENST00000554079 OTUB1Q96FW1 271 aaPredicted RBP9.15□□□□□ -0.94
SIX4-202ENST00000554079 PDCD10Q9BUL8 212 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 POLR3FQ9H1D9 316 aaPredicted RBP9.15□□□□□ -0.94
SIX4-202ENST00000554079 PRMT8Q9NR22 394 aaPredicted RBP9.15□□□□□ -0.94
SIX4-202ENST00000554079 MS4A12Q9NXJ0 267 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 SBF1O95248 1867 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 CHD5Q8TDI0 1954 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 ANKDD1BA6NHY2 528 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 ARVCFO00192 962 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 TERTO14746 1132 aaKnown RBP9.15□□□□□ -0.94
SIX4-202ENST00000554079 STBD1O95210 358 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 CD63P08962 238 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 MTHFD2P13995 350 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 C4BPBP20851 252 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 ATP5A1P25705 553 aaKnown RBP9.15□□□□□ -0.94
SIX4-202ENST00000554079 PIK3CGP48736 1102 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 EVX1P49640 407 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 STAT5BP51692 787 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 ITGA1P56199 1179 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 MAZP56270 477 aaKnown RBP9.15□□□□□ -0.94
SIX4-202ENST00000554079 SPCS3P61009 180 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 TSPAN5P62079 268 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 VLDLRP98155 873 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 STX4Q12846 297 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 IL18Q14116 193 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 DMC1Q14565 340 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 PAFAH1B3Q15102 231 aaKnown RBP9.15□□□□□ -0.94
SIX4-202ENST00000554079 ACER2Q5QJU3 275 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 ATG9BQ674R7 924 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms