RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 DDX39BQ13838 428 aaKnown RBP11.04□□□□□ -0.64
LETMD1-221ENST00000550100 HIST2H2ACQ16777 129 aaPredicted RBP11.04□□□□□ -0.64
LETMD1-221ENST00000550100 PAGE2BQ5JRK9 111 aa11.04□□□□□ -0.64
LETMD1-221ENST00000550100 DEPDC1Q5TB30 811 aa11.04□□□□□ -0.64
LETMD1-221ENST00000550100 HIST2H2AA3Q6FI13 130 aa11.04□□□□□ -0.64
LETMD1-221ENST00000550100 TRIM40Q6P9F5 258 aa11.04□□□□□ -0.64
LETMD1-221ENST00000550100 TIFABQ6ZNK6 161 aa11.04□□□□□ -0.64
LETMD1-221ENST00000550100 C16orf47Q6ZP98 133 aaPredicted RBP11.04□□□□□ -0.64
LETMD1-221ENST00000550100 TRMT10CQ7L0Y3 403 aaKnown RBP11.04□□□□□ -0.64
LETMD1-221ENST00000550100 ZNF321PQ8N8H1 164 aa11.04□□□□□ -0.64
LETMD1-221ENST00000550100 L3MBTL4Q8NA19 623 aa11.04□□□□□ -0.64
LETMD1-221ENST00000550100 APCDD1LQ8NCL9 501 aa11.04□□□□□ -0.64
LETMD1-221ENST00000550100 WDR20Q8TBZ3 569 aa11.04□□□□□ -0.64
LETMD1-221ENST00000550100 SREK1Q8WXA9 508 aaKnown RBP11.04□□□□□ -0.64
LETMD1-221ENST00000550100 ANKRD9Q96BM1 317 aaPredicted RBP11.04□□□□□ -0.64
LETMD1-221ENST00000550100 MTFMTQ96DP5 389 aaKnown RBP11.04□□□□□ -0.64
LETMD1-221ENST00000550100 SCYL1Q96KG9 808 aa11.04□□□□□ -0.64
LETMD1-221ENST00000550100 LPAR4Q99677 370 aa11.04□□□□□ -0.64
LETMD1-221ENST00000550100 CDCP1Q9H5V8 836 aa11.04□□□□□ -0.64
LETMD1-221ENST00000550100 NOL11Q9H8H0 719 aaKnown RBP11.04□□□□□ -0.64
LETMD1-221ENST00000550100 DMRT3Q9NQL9 472 aa11.04□□□□□ -0.64
LETMD1-221ENST00000550100 PRTFDC1Q9NRG1 225 aa11.04□□□□□ -0.64
LETMD1-221ENST00000550100 TMEM216Q9P0N5 145 aa11.04□□□□□ -0.64
LETMD1-221ENST00000550100 ZNF225Q9UK10 706 aa11.04□□□□□ -0.64
LETMD1-221ENST00000550100 PCTPQ9UKL6 214 aa11.04□□□□□ -0.64
LETMD1-221ENST00000550100 DIDO1Q9BTC0 2240 aaKnown RBP11.04□□□□□ -0.64
LETMD1-221ENST00000550100 A0A1W2PPM1 405 aa11.03□□□□□ -0.64
LETMD1-221ENST00000550100 CCDC189A1A4V9 331 aa11.03□□□□□ -0.64
LETMD1-221ENST00000550100 OR5H15A6NDH6 313 aa11.03□□□□□ -0.64
LETMD1-221ENST00000550100 SAGE2PA6NJ88 616 aa11.03□□□□□ -0.64
LETMD1-221ENST00000550100 TMEM200CA6NKL6 621 aa11.03□□□□□ -0.64
LETMD1-221ENST00000550100 GOLGA8RI6L899 631 aa11.03□□□□□ -0.64
LETMD1-221ENST00000550100 PSMD12O00232 456 aaPredicted RBP11.03□□□□□ -0.64
LETMD1-221ENST00000550100 PLPP1O14494 284 aa11.03□□□□□ -0.64
LETMD1-221ENST00000550100 LDB3O75112 727 aa11.03□□□□□ -0.64
LETMD1-221ENST00000550100 EEDO75530 441 aaKnown RBP11.03□□□□□ -0.64
LETMD1-221ENST00000550100 KRT38O76015 456 aa11.03□□□□□ -0.64
LETMD1-221ENST00000550100 SCELO95171 688 aa11.03□□□□□ -0.64
LETMD1-221ENST00000550100 MST1P26927 711 aa11.03□□□□□ -0.64
LETMD1-221ENST00000550100 TRAF3Q13114 568 aa11.03□□□□□ -0.64
LETMD1-221ENST00000550100 TUBA3CQ13748 450 aa11.03□□□□□ -0.64
LETMD1-221ENST00000550100 ZRSR2Q15696 482 aaKnown RBP11.03□□□□□ -0.64
LETMD1-221ENST00000550100 EXT1Q16394 746 aa11.03□□□□□ -0.64
LETMD1-221ENST00000550100 CPSF6Q16630 551 aaKnown RBP eCLIP11.03□□□□□ -0.64
LETMD1-221ENST00000550100 ABHD17BQ5VST6 288 aa11.03□□□□□ -0.64
LETMD1-221ENST00000550100 KHDRBS2Q5VWX1 349 aaKnown RBP11.03□□□□□ -0.64
LETMD1-221ENST00000550100 LIPJQ5W064 366 aa11.03□□□□□ -0.64
LETMD1-221ENST00000550100 C18orf63Q68DL7 685 aa11.03□□□□□ -0.64
LETMD1-221ENST00000550100 SPINK14Q6IE38 97 aa11.03□□□□□ -0.64
LETMD1-221ENST00000550100 NIPAL1Q6NVV3 410 aa11.03□□□□□ -0.64
LETMD1-221ENST00000550100 KLC3Q6P597 504 aa11.03□□□□□ -0.64
LETMD1-221ENST00000550100 TUBA3EQ6PEY2 450 aa11.03□□□□□ -0.64
LETMD1-221ENST00000550100 DGAT2L6Q6ZPD8 337 aa11.03□□□□□ -0.64
LETMD1-221ENST00000550100 SH2D5Q6ZV89 423 aa11.03□□□□□ -0.64
LETMD1-221ENST00000550100 OR4N5Q8IXE1 308 aa11.03□□□□□ -0.64
LETMD1-221ENST00000550100 FAM26EQ8N5C1 309 aa11.03□□□□□ -0.64
LETMD1-221ENST00000550100 MDS2Q8NDY4 140 aa11.03□□□□□ -0.64
LETMD1-221ENST00000550100 PRR7Q8TB68 274 aa11.03□□□□□ -0.64
LETMD1-221ENST00000550100 DOK4Q8TEW6 326 aa11.03□□□□□ -0.64
LETMD1-221ENST00000550100 FAR1Q8WVX9 515 aa11.03□□□□□ -0.64
LETMD1-221ENST00000550100 PSMG3-AS1Q96PY0 264 aa11.03□□□□□ -0.64
LETMD1-221ENST00000550100 RNF32Q9H0A6 362 aa11.03□□□□□ -0.64
LETMD1-221ENST00000550100 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.03□□□□□ -0.64
LETMD1-221ENST00000550100 ACTR8Q9H981 624 aa11.03□□□□□ -0.64
LETMD1-221ENST00000550100 LIN28AQ9H9Z2 209 aaKnown RBP11.03□□□□□ -0.64
LETMD1-221ENST00000550100 PNO1Q9NRX1 252 aaKnown RBP11.03□□□□□ -0.64
LETMD1-221ENST00000550100 DYTNA2CJ06 578 aa11.02□□□□□ -0.65
LETMD1-221ENST00000550100 A8MT66 165 aa11.02□□□□□ -0.65
LETMD1-221ENST00000550100 H0YIV9 168 aa11.02□□□□□ -0.65
LETMD1-221ENST00000550100 TMPRSS11DO60235 418 aa11.02□□□□□ -0.65
LETMD1-221ENST00000550100 MYO1DO94832 1006 aa11.02□□□□□ -0.65
LETMD1-221ENST00000550100 RBP1P09455 135 aa11.02□□□□□ -0.65
LETMD1-221ENST00000550100 COL6A2P12110 1019 aa11.02□□□□□ -0.65
LETMD1-221ENST00000550100 HIST1H1TP22492 207 aaPredicted RBP11.02□□□□□ -0.65
LETMD1-221ENST00000550100 TPP2P29144 1249 aaPredicted RBP11.02□□□□□ -0.65
LETMD1-221ENST00000550100 BSGP35613 385 aa11.02□□□□□ -0.65
LETMD1-221ENST00000550100 CDH13P55290 713 aa11.02□□□□□ -0.65
LETMD1-221ENST00000550100 HNRNPH2P55795 449 aaKnown RBP11.02□□□□□ -0.65
LETMD1-221ENST00000550100 SKP1P63208 163 aa11.02□□□□□ -0.65
LETMD1-221ENST00000550100 TMEM35AQ53FP2 167 aa11.02□□□□□ -0.65
LETMD1-221ENST00000550100 DOPEY1Q5JWR5 2465 aa11.02□□□□□ -0.65
LETMD1-221ENST00000550100 HIST2H2BCQ6DN03 193 aa11.02□□□□□ -0.65
LETMD1-221ENST00000550100 OR4C11Q6IEV9 310 aa11.02□□□□□ -0.65
LETMD1-221ENST00000550100 RPUSD3Q6P087 351 aaKnown RBP11.02□□□□□ -0.65
LETMD1-221ENST00000550100 MYLK4Q86YV6 388 aaPredicted RBP11.02□□□□□ -0.65
LETMD1-221ENST00000550100 THAP3Q8WTV1 239 aaPredicted RBP11.02□□□□□ -0.65
LETMD1-221ENST00000550100 PTPMT1Q8WUK0 201 aaPredicted RBP11.02□□□□□ -0.65
LETMD1-221ENST00000550100 CMTM7Q96FZ5 175 aa11.02□□□□□ -0.65
LETMD1-221ENST00000550100 ZNF354BQ96LW1 612 aa11.02□□□□□ -0.65
LETMD1-221ENST00000550100 KCNC2Q96PR1 638 aa11.02□□□□□ -0.65
LETMD1-221ENST00000550100 MRPL57Q9BQC6 102 aaKnown RBP11.02□□□□□ -0.65
LETMD1-221ENST00000550100 TBCDQ9BTW9 1192 aa11.02□□□□□ -0.65
LETMD1-221ENST00000550100 ANKZF1Q9H8Y5 726 aa11.02□□□□□ -0.65
LETMD1-221ENST00000550100 LYRM4Q9HD34 91 aa11.02□□□□□ -0.65
LETMD1-221ENST00000550100 FARSBQ9NSD9 589 aaKnown RBP11.02□□□□□ -0.65
LETMD1-221ENST00000550100 FBXW2Q9UKT8 454 aa11.02□□□□□ -0.65
LETMD1-221ENST00000550100 TSC22D4Q9Y3Q8 395 aa11.02□□□□□ -0.65
LETMD1-221ENST00000550100 ATG4BQ9Y4P1 393 aa11.02□□□□□ -0.65
LETMD1-221ENST00000550100 MMACHCQ9Y4U1 282 aa11.02□□□□□ -0.65
LETMD1-221ENST00000550100 ANGPTL3Q9Y5C1 460 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms