RNA–Protein interactions for RNA: ENST00000548259.1

VPS29-204, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-204ENST00000548259 XAB2Q9HCS7 855 aaKnown RBP15.69■□□□□ 0.1
VPS29-204ENST00000548259 PCDHGB3Q9Y5G1 929 aa15.69■□□□□ 0.1
VPS29-204ENST00000548259 CAPN6Q9Y6Q1 641 aa15.69■□□□□ 0.1
VPS29-204ENST00000548259 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.69■□□□□ 0.1
VPS29-204ENST00000548259 TRGV5A0A0B4J1U4 118 aa15.68■□□□□ 0.1
VPS29-204ENST00000548259 WWP2O00308 870 aa15.68■□□□□ 0.1
VPS29-204ENST00000548259 HAUS5O94927 633 aa15.68■□□□□ 0.1
VPS29-204ENST00000548259 INHBBP09529 407 aa15.68■□□□□ 0.1
VPS29-204ENST00000548259 ADH7P40394 386 aa15.68■□□□□ 0.1
VPS29-204ENST00000548259 TERF1P54274 439 aa15.68■□□□□ 0.1
VPS29-204ENST00000548259 IL2P60568 153 aa15.68■□□□□ 0.1
VPS29-204ENST00000548259 BTN3A2P78410 334 aa15.68■□□□□ 0.1
VPS29-204ENST00000548259 TBL3Q12788 808 aaKnown RBP15.68■□□□□ 0.1
VPS29-204ENST00000548259 HYAL4Q2M3T9 481 aa15.68■□□□□ 0.1
VPS29-204ENST00000548259 CATSPEREQ5SY80 951 aa15.68■□□□□ 0.1
VPS29-204ENST00000548259 RTL6Q6ICC9 239 aa15.68■□□□□ 0.1
VPS29-204ENST00000548259 CLEC9AQ6UXN8 241 aa15.68■□□□□ 0.1
VPS29-204ENST00000548259 KIF18BQ86Y91 864 aa15.68■□□□□ 0.1
VPS29-204ENST00000548259 SCUBE1Q8IWY4 988 aa15.68■□□□□ 0.1
VPS29-204ENST00000548259 LINGO1Q96FE5 620 aa15.68■□□□□ 0.1
VPS29-204ENST00000548259 PELI2Q9HAT8 420 aa15.68■□□□□ 0.1
VPS29-204ENST00000548259 DMRT3Q9NQL9 472 aa15.68■□□□□ 0.1
VPS29-204ENST00000548259 ZNF223Q9UK11 482 aaPredicted RBP15.68■□□□□ 0.1
VPS29-204ENST00000548259 KCNE2Q9Y6J6 123 aa15.68■□□□□ 0.1
VPS29-204ENST00000548259 ZNF469Q96JG9 3925 aaPredicted RBP15.67■□□□□ 0.1
VPS29-204ENST00000548259 TCRBV7S3A2A0A539 114 aa15.67■□□□□ 0.1
VPS29-204ENST00000548259 G3V3Y1 287 aa15.67■□□□□ 0.1
VPS29-204ENST00000548259 GOSR1O95249 250 aa15.67■□□□□ 0.1
VPS29-204ENST00000548259 CCZ1BP86790 482 aa15.67■□□□□ 0.1
VPS29-204ENST00000548259 CCZ1P86791 482 aaPredicted RBP15.67■□□□□ 0.1
VPS29-204ENST00000548259 REEP5Q00765 189 aa15.67■□□□□ 0.1
VPS29-204ENST00000548259 DAZAP2Q15038 168 aaPredicted RBP15.67■□□□□ 0.1
VPS29-204ENST00000548259 XKR6Q5GH73 641 aa15.67■□□□□ 0.1
VPS29-204ENST00000548259 TOR1AIP1Q5JTV8 583 aa15.67■□□□□ 0.1
VPS29-204ENST00000548259 MAATS1Q7Z4T9 603 aa15.67■□□□□ 0.1
VPS29-204ENST00000548259 MORN4Q8NDC4 146 aa15.67■□□□□ 0.1
VPS29-204ENST00000548259 C7orf57Q8NEG2 295 aa15.67■□□□□ 0.1
VPS29-204ENST00000548259 TTLQ8NG68 377 aa15.67■□□□□ 0.1
VPS29-204ENST00000548259 OR8K3Q8NH51 312 aa15.67■□□□□ 0.1
VPS29-204ENST00000548259 NEIL2Q969S2 332 aa15.67■□□□□ 0.1
VPS29-204ENST00000548259 GAL3ST3Q96A11 431 aa15.67■□□□□ 0.1
VPS29-204ENST00000548259 FBXL8Q96CD0 374 aa15.67■□□□□ 0.1
VPS29-204ENST00000548259 LIPGQ9Y5X9 500 aa15.67■□□□□ 0.1
VPS29-204ENST00000548259 PHF3Q92576 2039 aaKnown RBP15.67■□□□□ 0.1
VPS29-204ENST00000548259 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.66■□□□□ 0.1
VPS29-204ENST00000548259 ZCWPW2A0A1B0GU75 182 aa15.66■□□□□ 0.1
VPS29-204ENST00000548259 TUBAL3A6NHL2 446 aa15.66■□□□□ 0.1
VPS29-204ENST00000548259 B3GALT2O43825 422 aa15.66■□□□□ 0.1
VPS29-204ENST00000548259 ENO2P09104 434 aaPredicted RBP15.66■□□□□ 0.1
VPS29-204ENST00000548259 SMIM10L1P0DMW3 83 aa15.66■□□□□ 0.1
VPS29-204ENST00000548259 BMP5P22003 454 aa15.66■□□□□ 0.1
VPS29-204ENST00000548259 MAGEA6P43360 314 aa15.66■□□□□ 0.1
VPS29-204ENST00000548259 GPR143P51810 404 aa15.66■□□□□ 0.1
VPS29-204ENST00000548259 NR0B1P51843 470 aaKnown RBP15.66■□□□□ 0.1
VPS29-204ENST00000548259 GPS1Q13098 491 aa15.66■□□□□ 0.1
VPS29-204ENST00000548259 SNTB1Q13884 538 aaKnown RBP15.66■□□□□ 0.1
VPS29-204ENST00000548259 EFTUD2Q15029 972 aaKnown RBP eCLIP15.66■□□□□ 0.13e-9■■■□□ 18.5
VPS29-204ENST00000548259 SF3B4Q15427 424 aaKnown RBP eCLIP15.66■□□□□ 0.12e-7■■■□□ 14.6
VPS29-204ENST00000548259 ZNF750Q32MQ0 723 aa15.66■□□□□ 0.1
VPS29-204ENST00000548259 PAQR3Q6TCH7 311 aa15.66■□□□□ 0.1
VPS29-204ENST00000548259 C16orf47Q6ZP98 133 aaPredicted RBP15.66■□□□□ 0.1
VPS29-204ENST00000548259 Q71RC1 249 aaPredicted RBP15.66■□□□□ 0.1
VPS29-204ENST00000548259 TMPRSS11BQ86T26 416 aa15.66■□□□□ 0.1
VPS29-204ENST00000548259 LIX1Q8N485 282 aa15.66■□□□□ 0.1
VPS29-204ENST00000548259 WFDC11Q8NEX6 87 aa15.66■□□□□ 0.1
VPS29-204ENST00000548259 OR14A16Q8NHC5 309 aa15.66■□□□□ 0.1
VPS29-204ENST00000548259 SLCO2A1Q92959 643 aa15.66■□□□□ 0.1
VPS29-204ENST00000548259 SMIM10Q96HG1 83 aa15.66■□□□□ 0.1
VPS29-204ENST00000548259 TSNARE1Q96NA8 513 aa15.66■□□□□ 0.1
VPS29-204ENST00000548259 OR4K3Q96R72 315 aa15.66■□□□□ 0.1
VPS29-204ENST00000548259 NDNQ99608 321 aa15.66■□□□□ 0.1
VPS29-204ENST00000548259 LIN28AQ9H9Z2 209 aaKnown RBP15.66■□□□□ 0.1
VPS29-204ENST00000548259 COPS7AQ9UBW8 275 aa15.66■□□□□ 0.1
VPS29-204ENST00000548259 CBLCQ9ULV8 474 aa15.66■□□□□ 0.1
VPS29-204ENST00000548259 BOKQ9UMX3 212 aaPredicted RBP15.66■□□□□ 0.1
VPS29-204ENST00000548259 DNHD1Q96M86 4753 aa15.65■□□□□ 0.1
VPS29-204ENST00000548259 A0A0G2JMM0 328 aa15.65■□□□□ 0.1
VPS29-204ENST00000548259 A0A1W2PPB8 328 aa15.65■□□□□ 0.1
VPS29-204ENST00000548259 A0A1W2PRS3 328 aa15.65■□□□□ 0.1
VPS29-204ENST00000548259 KIR3DP1A8MWS1 328 aa15.65■□□□□ 0.1
VPS29-204ENST00000548259 ARHGEF9O43307 516 aa15.65■□□□□ 0.1
VPS29-204ENST00000548259 NRDCO43847 1150 aa15.65■□□□□ 0.1
VPS29-204ENST00000548259 PRKNO60260 465 aaPredicted RBP15.65■□□□□ 0.1
VPS29-204ENST00000548259 H2AFYO75367 372 aaKnown RBP15.65■□□□□ 0.1
VPS29-204ENST00000548259 ATE1O95260 518 aa15.65■□□□□ 0.1
VPS29-204ENST00000548259 F7P08709 466 aaPredicted RBP15.65■□□□□ 0.1
VPS29-204ENST00000548259 TNNI3P19429 210 aa15.65■□□□□ 0.1
VPS29-204ENST00000548259 GSTM2P28161 218 aa15.65■□□□□ 0.1
VPS29-204ENST00000548259 KCNJ1P48048 391 aa15.65■□□□□ 0.1
VPS29-204ENST00000548259 VPS41P49754 854 aa15.65■□□□□ 0.1
VPS29-204ENST00000548259 HK2P52789 917 aa15.65■□□□□ 0.1
VPS29-204ENST00000548259 RAB38P57729 211 aa15.65■□□□□ 0.1
VPS29-204ENST00000548259 STX4Q12846 297 aa15.65■□□□□ 0.1
VPS29-204ENST00000548259 PDAP1Q13442 181 aaKnown RBP15.65■□□□□ 0.1
VPS29-204ENST00000548259 SIX1Q15475 284 aaPredicted RBP15.65■□□□□ 0.1
VPS29-204ENST00000548259 TRIP13Q15645 432 aaPredicted RBP15.65■□□□□ 0.1
VPS29-204ENST00000548259 FBXL19-AS1Q494R0 122 aa15.65■□□□□ 0.1
VPS29-204ENST00000548259 HSP90AA5PQ58FG0 334 aa15.65■□□□□ 0.1
VPS29-204ENST00000548259 SHEQ5VZ18 495 aa15.65■□□□□ 0.1
VPS29-204ENST00000548259 NXPE4Q6UWF7 544 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms