RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 SLC22A7Q9Y694 548 aa28.87■■■□□ 2.21
CCM2-219ENST00000544363 ASXL3Q9C0F0 2248 aa28.87■■■□□ 2.21
CCM2-219ENST00000544363 CTSBP07858 339 aa28.86■■■□□ 2.21
CCM2-219ENST00000544363 HOXB9P17482 250 aaPredicted RBP28.86■■■□□ 2.21
CCM2-219ENST00000544363 MPEG1Q2M385 716 aa28.86■■■□□ 2.21
CCM2-219ENST00000544363 MUM1Q2TAK8 710 aa28.86■■■□□ 2.21
CCM2-219ENST00000544363 PRTGQ2VWP7 1150 aa28.86■■■□□ 2.21
CCM2-219ENST00000544363 SPATS1Q496A3 300 aa28.86■■■□□ 2.21
CCM2-219ENST00000544363 PRSS42Q7Z5A4 293 aa28.86■■■□□ 2.21
CCM2-219ENST00000544363 FAM47BQ8NA70 645 aa28.86■■■□□ 2.21
CCM2-219ENST00000544363 ZNF285Q96NJ3 590 aa28.86■■■□□ 2.21
CCM2-219ENST00000544363 PANX1Q96RD7 426 aa28.86■■■□□ 2.21
CCM2-219ENST00000544363 FBXW2Q9UKT8 454 aa28.86■■■□□ 2.21
CCM2-219ENST00000544363 ATG4BQ9Y4P1 393 aa28.86■■■□□ 2.21
CCM2-219ENST00000544363 RP1P56715 2156 aa28.86■■■□□ 2.21
CCM2-219ENST00000544363 ANP32DO95626 131 aa28.85■■■□□ 2.21
CCM2-219ENST00000544363 CKMT1AP12532 417 aa28.85■■■□□ 2.21
CCM2-219ENST00000544363 GTDC1Q4AE62 458 aa28.85■■■□□ 2.21
CCM2-219ENST00000544363 RUNDC3AQ59EK9 446 aa28.85■■■□□ 2.21
CCM2-219ENST00000544363 NATD1Q8N6N6 113 aa28.85■■■□□ 2.21
CCM2-219ENST00000544363 GBP5Q96PP8 586 aa28.85■■■□□ 2.21
CCM2-219ENST00000544363 NUDT22Q9BRQ3 303 aa28.85■■■□□ 2.21
CCM2-219ENST00000544363 VPS13AQ96RL7 3174 aa28.85■■■□□ 2.21
CCM2-219ENST00000544363 WDFY4Q6ZS81 3184 aa28.84■■■□□ 2.21
CCM2-219ENST00000544363 A0A1W2PR48 441 aa28.84■■■□□ 2.21
CCM2-219ENST00000544363 CASC3O15234 703 aaKnown RBP28.84■■■□□ 2.21
CCM2-219ENST00000544363 CPSF4O95639 269 aaKnown RBP28.84■■■□□ 2.21
CCM2-219ENST00000544363 GSNP06396 782 aa28.84■■■□□ 2.21
CCM2-219ENST00000544363 EFNA1P20827 205 aaPredicted RBP28.84■■■□□ 2.21
CCM2-219ENST00000544363 HSD11B2P80365 405 aa28.84■■■□□ 2.21
CCM2-219ENST00000544363 SNAP47Q5SQN1 464 aa28.84■■■□□ 2.21
CCM2-219ENST00000544363 TMEM71Q6P5X7 295 aa28.84■■■□□ 2.21
CCM2-219ENST00000544363 ARHGEF39Q8N4T4 335 aa28.84■■■□□ 2.21
CCM2-219ENST00000544363 CIDECQ96AQ7 238 aaPredicted RBP28.84■■■□□ 2.21
CCM2-219ENST00000544363 MAPKAP1Q9BPZ7 522 aa28.84■■■□□ 2.21
CCM2-219ENST00000544363 EHD3Q9NZN3 535 aa28.84■■■□□ 2.21
CCM2-219ENST00000544363 PCDHGB2Q9Y5G2 931 aa28.84■■■□□ 2.21
CCM2-219ENST00000544363 PROM1O43490 865 aa28.83■■■□□ 2.21
CCM2-219ENST00000544363 B3GALT2O43825 422 aa28.83■■■□□ 2.21
CCM2-219ENST00000544363 TCN1P20061 433 aaPredicted RBP28.83■■■□□ 2.21
CCM2-219ENST00000544363 DUSP3P51452 185 aaPredicted RBP28.83■■■□□ 2.21
CCM2-219ENST00000544363 DAB2P98082 770 aa28.83■■■□□ 2.21
CCM2-219ENST00000544363 FAM156AQ8NDB6 213 aa28.83■■■□□ 2.21
CCM2-219ENST00000544363 SH3GL1Q99961 368 aa28.83■■■□□ 2.21
CCM2-219ENST00000544363 DNAAF2Q9NVR5 837 aaKnown RBP28.83■■■□□ 2.21
CCM2-219ENST00000544363 TAS2R7Q9NYW3 318 aa28.83■■■□□ 2.21
CCM2-219ENST00000544363 SUCOQ9UBS9 1254 aaKnown RBP28.83■■■□□ 2.21
CCM2-219ENST00000544363 ERVK-11Q9UQG0 969 aa28.83■■■□□ 2.21
CCM2-219ENST00000544363 UNC13CQ8NB66 2214 aa28.83■■■□□ 2.21
CCM2-219ENST00000544363 ZNF318Q5VUA4 2279 aa28.83■■■□□ 2.21
CCM2-219ENST00000544363 LNP1A1A4G5 178 aa28.83■■■□□ 2.21
CCM2-219ENST00000544363 HSD17B1P14061 328 aa28.83■■■□□ 2.21
CCM2-219ENST00000544363 MSX2P35548 267 aaPredicted RBP28.83■■■□□ 2.21
CCM2-219ENST00000544363 ARL4DP49703 201 aa28.83■■■□□ 2.21
CCM2-219ENST00000544363 SEPHS1P49903 392 aa28.83■■■□□ 2.21
CCM2-219ENST00000544363 EEFSECP57772 596 aaKnown RBP28.83■■■□□ 2.21
CCM2-219ENST00000544363 MTPNP58546 118 aa28.83■■■□□ 2.21
CCM2-219ENST00000544363 ACTR3P61158 418 aa28.83■■■□□ 2.21
CCM2-219ENST00000544363 CCL7P80098 99 aa28.83■■■□□ 2.21
CCM2-219ENST00000544363 RIPK1Q13546 671 aa28.83■■■□□ 2.21
CCM2-219ENST00000544363 SELPLGQ14242 412 aa28.83■■■□□ 2.21
CCM2-219ENST00000544363 KMT5CQ86Y97 462 aa28.83■■■□□ 2.21
CCM2-219ENST00000544363 C10orf67Q8IYJ2 551 aa28.83■■■□□ 2.21
CCM2-219ENST00000544363 SCN3AQ9NY46 2000 aa28.82■■■□□ 2.2
CCM2-219ENST00000544363 A0A1W2PQM1 296 aa28.82■■■□□ 2.2
CCM2-219ENST00000544363 C1orf226A1L170 272 aa28.82■■■□□ 2.2
CCM2-219ENST00000544363 ENTPD5O75356 428 aa28.82■■■□□ 2.2
CCM2-219ENST00000544363 AIFM1O95831 613 aa28.82■■■□□ 2.2
CCM2-219ENST00000544363 TCTE1Q5JU00 501 aa28.82■■■□□ 2.2
CCM2-219ENST00000544363 DBX2Q6ZNG2 339 aa28.82■■■□□ 2.2
CCM2-219ENST00000544363 D2HGDHQ8N465 521 aa28.82■■■□□ 2.2
CCM2-219ENST00000544363 IFI44Q8TCB0 444 aa28.82■■■□□ 2.2
CCM2-219ENST00000544363 KLHL6Q8WZ60 621 aa28.82■■■□□ 2.2
CCM2-219ENST00000544363 N4BP2L2Q92802 583 aaPredicted RBP28.82■■■□□ 2.2
CCM2-219ENST00000544363 UCN3Q969E3 161 aa28.82■■■□□ 2.2
CCM2-219ENST00000544363 SLC41A2Q96JW4 573 aa28.82■■■□□ 2.2
CCM2-219ENST00000544363 LRRN3Q9H3W5 708 aa28.82■■■□□ 2.2
CCM2-219ENST00000544363 C5AR2Q9P296 337 aa28.82■■■□□ 2.2
CCM2-219ENST00000544363 PHF11Q9UIL8 331 aa28.82■■■□□ 2.2
CCM2-219ENST00000544363 ATXN7L1Q9ULK2 861 aaPredicted RBP28.82■■■□□ 2.2
CCM2-219ENST00000544363 TOX3O15405 576 aaPredicted RBP28.81■■■□□ 2.2
CCM2-219ENST00000544363 GALR3O60755 368 aaPredicted RBP28.81■■■□□ 2.2
CCM2-219ENST00000544363 CPNE6O95741 557 aa28.81■■■□□ 2.2
CCM2-219ENST00000544363 RPLP0P05388 317 aaKnown RBP28.81■■■□□ 2.2
CCM2-219ENST00000544363 RETP07949 1114 aa28.81■■■□□ 2.2
CCM2-219ENST00000544363 IL1RNP18510 177 aa28.81■■■□□ 2.2
CCM2-219ENST00000544363 MS4A2Q01362 244 aa28.81■■■□□ 2.2
CCM2-219ENST00000544363 LIPEQ05469 1076 aa28.81■■■□□ 2.2
CCM2-219ENST00000544363 RUNX2Q13950 521 aa28.81■■■□□ 2.2
CCM2-219ENST00000544363 TRIM25Q14258 630 aaKnown RBP28.81■■■□□ 2.2
CCM2-219ENST00000544363 FBXW10Q5XX13 1052 aa28.81■■■□□ 2.2
CCM2-219ENST00000544363 ZNF621Q6ZSS3 439 aa28.81■■■□□ 2.2
CCM2-219ENST00000544363 PRSS41Q7RTY9 318 aa28.81■■■□□ 2.2
CCM2-219ENST00000544363 GOT1L1Q8NHS2 421 aaPredicted RBP28.81■■■□□ 2.2
CCM2-219ENST00000544363 ASB9Q96DX5 294 aa28.81■■■□□ 2.2
CCM2-219ENST00000544363 PHF12Q96QT6 1004 aa28.81■■■□□ 2.2
CCM2-219ENST00000544363 KCMF1Q9P0J7 381 aa28.81■■■□□ 2.2
CCM2-219ENST00000544363 GMPR2Q9P2T1 348 aaKnown RBP28.81■■■□□ 2.2
CCM2-219ENST00000544363 PCDHGB4Q9UN71 923 aa28.81■■■□□ 2.2
CCM2-219ENST00000544363 A0A1W2PRB8 838 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms