RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 NFAM1Q8NET5 270 aaPredicted RBP16.33■□□□□ 0.2
LTBR-210ENST00000542830 B3GNT7Q8NFL0 401 aa16.33■□□□□ 0.2
LTBR-210ENST00000542830 OR7G3Q8NG95 312 aa16.33■□□□□ 0.2
LTBR-210ENST00000542830 ISL2Q96A47 359 aa16.33■□□□□ 0.2
LTBR-210ENST00000542830 CMTM7Q96FZ5 175 aa16.33■□□□□ 0.2
LTBR-210ENST00000542830 PAFAH2Q99487 392 aa16.33■□□□□ 0.2
LTBR-210ENST00000542830 CENPKQ9BS16 269 aa16.33■□□□□ 0.2
LTBR-210ENST00000542830 DEFB126Q9BYW3 111 aa16.33■□□□□ 0.2
LTBR-210ENST00000542830 VPS11Q9H270 941 aa16.33■□□□□ 0.2
LTBR-210ENST00000542830 PLEKHB1Q9UF11 243 aaPredicted RBP16.33■□□□□ 0.2
LTBR-210ENST00000542830 SPACA6W5XKT8 324 aa16.33■□□□□ 0.2
LTBR-210ENST00000542830 A8MUA0 341 aa16.32■□□□□ 0.2
LTBR-210ENST00000542830 CYR61O00622 381 aa16.32■□□□□ 0.2
LTBR-210ENST00000542830 FCHO1O14526 889 aa16.32■□□□□ 0.2
LTBR-210ENST00000542830 KRT38O76015 456 aa16.32■□□□□ 0.2
LTBR-210ENST00000542830 MYO1DO94832 1006 aa16.32■□□□□ 0.2
LTBR-210ENST00000542830 SCELO95171 688 aa16.32■□□□□ 0.2
LTBR-210ENST00000542830 RBP1P09455 135 aa16.32■□□□□ 0.2
LTBR-210ENST00000542830 ECHS1P30084 290 aa16.32■□□□□ 0.2
LTBR-210ENST00000542830 PIK3CBP42338 1070 aa16.32■□□□□ 0.2
LTBR-210ENST00000542830 MAGEA12P43365 314 aa16.32■□□□□ 0.2
LTBR-210ENST00000542830 TDGF1P3P51864 188 aa16.32■□□□□ 0.2
LTBR-210ENST00000542830 PER3P56645 1201 aa16.32■□□□□ 0.2
LTBR-210ENST00000542830 PHEXP78562 749 aa16.32■□□□□ 0.2
LTBR-210ENST00000542830 AP5B1Q2VPB7 878 aa16.32■□□□□ 0.2
LTBR-210ENST00000542830 FAM98AQ8NCA5 519 aaKnown RBP16.32■□□□□ 0.2
LTBR-210ENST00000542830 REPS1Q96D71 796 aa16.32■□□□□ 0.2
LTBR-210ENST00000542830 SCMH1Q96GD3 660 aa16.32■□□□□ 0.2
LTBR-210ENST00000542830 GPR78Q96P69 363 aa16.32■□□□□ 0.2
LTBR-210ENST00000542830 SIGLEC12Q96PQ1 595 aa16.32■□□□□ 0.2
LTBR-210ENST00000542830 ACTR8Q9H981 624 aa16.32■□□□□ 0.2
LTBR-210ENST00000542830 ADAP2Q9NPF8 381 aa16.32■□□□□ 0.2
LTBR-210ENST00000542830 PNO1Q9NRX1 252 aaKnown RBP16.32■□□□□ 0.2
LTBR-210ENST00000542830 ANKRD10Q9NXR5 420 aa16.32■□□□□ 0.2
LTBR-210ENST00000542830 LRFN1Q9P244 771 aa16.32■□□□□ 0.2
LTBR-210ENST00000542830 ZNF180Q9UJW8 692 aa16.32■□□□□ 0.2
LTBR-210ENST00000542830 TMCO1Q9UM00 188 aa16.32■□□□□ 0.2
LTBR-210ENST00000542830 PPIEQ9UNP9 301 aaKnown RBP16.32■□□□□ 0.2
LTBR-210ENST00000542830 OSGIN2Q9Y236 505 aa16.32■□□□□ 0.2
LTBR-210ENST00000542830 TSC22D4Q9Y3Q8 395 aa16.32■□□□□ 0.2
LTBR-210ENST00000542830 PCDHGA11Q9Y5H2 935 aa16.32■□□□□ 0.2
LTBR-210ENST00000542830 A0A087WUV0 522 aaPredicted RBP16.31■□□□□ 0.2
LTBR-210ENST00000542830 MAN1A2O60476 641 aa16.31■□□□□ 0.2
LTBR-210ENST00000542830 CTNSO60931 367 aa16.31■□□□□ 0.2
LTBR-210ENST00000542830 MLYCDO95822 493 aa16.31■□□□□ 0.2
LTBR-210ENST00000542830 TGFB1P01137 390 aa16.31■□□□□ 0.2
LTBR-210ENST00000542830 STSP08842 583 aa16.31■□□□□ 0.2
LTBR-210ENST00000542830 RNF224P0DH78 156 aa16.31■□□□□ 0.2
LTBR-210ENST00000542830 HIST1H1TP22492 207 aaPredicted RBP16.31■□□□□ 0.2
LTBR-210ENST00000542830 ATP5A1P25705 553 aaKnown RBP16.31■□□□□ 0.2
LTBR-210ENST00000542830 TPP2P29144 1249 aaPredicted RBP16.31■□□□□ 0.2
LTBR-210ENST00000542830 EEF1DP29692 281 aaKnown RBP16.31■□□□□ 0.2
LTBR-210ENST00000542830 SSR2P43308 183 aa16.31■□□□□ 0.2
LTBR-210ENST00000542830 CYB561P49447 251 aa16.31■□□□□ 0.2
LTBR-210ENST00000542830 HNRNPFP52597 415 aaKnown RBP16.31■□□□□ 0.2
LTBR-210ENST00000542830 MLF1P58340 268 aa16.31■□□□□ 0.2
LTBR-210ENST00000542830 SERTAD2Q14140 314 aa16.31■□□□□ 0.2
LTBR-210ENST00000542830 ELAVL1Q15717 326 aaKnown RBP16.31■□□□□ 0.2
LTBR-210ENST00000542830 TSNAXIP1Q2TAA8 658 aa16.31■□□□□ 0.2
LTBR-210ENST00000542830 TECRLQ5HYJ1 363 aa16.31■□□□□ 0.2
LTBR-210ENST00000542830 UBAP2Q5T6F2 1119 aaKnown RBP16.31■□□□□ 0.2
LTBR-210ENST00000542830 DEPDC1Q5TB30 811 aa16.31■□□□□ 0.2
LTBR-210ENST00000542830 KHDRBS2Q5VWX1 349 aaKnown RBP16.31■□□□□ 0.2
LTBR-210ENST00000542830 SPINK14Q6IE38 97 aa16.31■□□□□ 0.2
LTBR-210ENST00000542830 GFRALQ6UXV0 394 aa16.31■□□□□ 0.2
LTBR-210ENST00000542830 UBE3DQ7Z6J8 389 aa16.31■□□□□ 0.2
LTBR-210ENST00000542830 MYLK4Q86YV6 388 aaPredicted RBP16.31■□□□□ 0.2
LTBR-210ENST00000542830 ARMC10Q8N2F6 343 aa16.31■□□□□ 0.2
LTBR-210ENST00000542830 TMEM132CQ8N3T6 1108 aa16.31■□□□□ 0.2
LTBR-210ENST00000542830 APCDD1LQ8NCL9 501 aa16.31■□□□□ 0.2
LTBR-210ENST00000542830 TMEM52Q8NDY8 209 aa16.31■□□□□ 0.2
LTBR-210ENST00000542830 VMP1Q96GC9 406 aa16.31■□□□□ 0.2
LTBR-210ENST00000542830 CSF3RQ99062 836 aa16.31■□□□□ 0.2
LTBR-210ENST00000542830 CCDC77Q9BR77 488 aa16.31■□□□□ 0.2
LTBR-210ENST00000542830 KCMF1Q9P0J7 381 aa16.31■□□□□ 0.2
LTBR-210ENST00000542830 CPSF2Q9P2I0 782 aaKnown RBP16.31■□□□□ 0.2
LTBR-210ENST00000542830 CLDN16Q9Y5I7 305 aa16.31■□□□□ 0.2
LTBR-210ENST00000542830 DOPEY1Q5JWR5 2465 aa16.31■□□□□ 0.2
LTBR-210ENST00000542830 TRBV11-1A0A0K0K1C0 115 aa16.3■□□□□ 0.2
LTBR-210ENST00000542830 A0A1B0GUH1 482 aa16.3■□□□□ 0.2
LTBR-210ENST00000542830 H0YIV9 168 aa16.3■□□□□ 0.2
LTBR-210ENST00000542830 COL6A2P12110 1019 aa16.3■□□□□ 0.2
LTBR-210ENST00000542830 TRHRP34981 398 aaPredicted RBP16.3■□□□□ 0.2
LTBR-210ENST00000542830 ARFIP1P53367 373 aa16.3■□□□□ 0.2
LTBR-210ENST00000542830 RBPJQ06330 500 aa16.3■□□□□ 0.2
LTBR-210ENST00000542830 STX4Q12846 297 aa16.3■□□□□ 0.2
LTBR-210ENST00000542830 GTF2H2Q13888 395 aa16.3■□□□□ 0.2
LTBR-210ENST00000542830 SLC25A25Q6KCM7 469 aa16.3■□□□□ 0.2
LTBR-210ENST00000542830 GTF2H2CQ6P1K8 395 aa16.3■□□□□ 0.2
LTBR-210ENST00000542830 ZNF793Q6ZN11 406 aa16.3■□□□□ 0.2
LTBR-210ENST00000542830 PLD6Q8N2A8 252 aaKnown RBP16.3■□□□□ 0.2
LTBR-210ENST00000542830 ACOT4Q8N9L9 421 aa16.3■□□□□ 0.2
LTBR-210ENST00000542830 HUS1BQ8NHY5 278 aa16.3■□□□□ 0.2
LTBR-210ENST00000542830 DAZLQ92904 295 aaKnown RBP16.3■□□□□ 0.2
LTBR-210ENST00000542830 RGMAQ96B86 450 aa16.3■□□□□ 0.2
LTBR-210ENST00000542830 TRIM45Q9H8W5 580 aaPredicted RBP16.3■□□□□ 0.2
LTBR-210ENST00000542830 DMRT3Q9NQL9 472 aa16.3■□□□□ 0.2
LTBR-210ENST00000542830 KLHL1Q9NR64 748 aa16.3■□□□□ 0.2
LTBR-210ENST00000542830 MS4A12Q9NXJ0 267 aa16.3■□□□□ 0.2
LTBR-210ENST00000542830 SEC14L3Q9UDX4 400 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms