RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 HSD11B2P80365 405 aa26.36■■□□□ 1.81
CCM2-218ENST00000541586 RIPK1Q13546 671 aa26.36■■□□□ 1.81
CCM2-218ENST00000541586 C16orf72Q14CZ0 275 aa26.36■■□□□ 1.81
CCM2-218ENST00000541586 MSANTD1Q6ZTZ1 278 aa26.36■■□□□ 1.81
CCM2-218ENST00000541586 SLC15A3Q8IY34 581 aa26.36■■□□□ 1.81
CCM2-218ENST00000541586 C19orf47Q8N9M1 422 aaKnown RBP26.36■■□□□ 1.81
CCM2-218ENST00000541586 TEFMQ96QE5 360 aaKnown RBP26.36■■□□□ 1.81
CCM2-218ENST00000541586 ZFYVE21Q9BQ24 234 aa26.36■■□□□ 1.81
CCM2-218ENST00000541586 SLC6A16Q9GZN6 736 aa26.36■■□□□ 1.81
CCM2-218ENST00000541586 REEP4Q9H6H4 257 aa26.36■■□□□ 1.81
CCM2-218ENST00000541586 RMND5AQ9H871 391 aa26.36■■□□□ 1.81
CCM2-218ENST00000541586 DDX31Q9H8H2 851 aaKnown RBP26.36■■□□□ 1.81
CCM2-218ENST00000541586 PDE7BQ9NP56 450 aa26.36■■□□□ 1.81
CCM2-218ENST00000541586 SERHLQ9NQF3 203 aa26.36■■□□□ 1.81
CCM2-218ENST00000541586 ERI3O43414 337 aaKnown RBP26.36■■□□□ 1.81
CCM2-218ENST00000541586 LAMP1P11279 417 aa26.36■■□□□ 1.81
CCM2-218ENST00000541586 WNT3P56703 355 aa26.36■■□□□ 1.81
CCM2-218ENST00000541586 MC1RQ01726 317 aa26.36■■□□□ 1.81
CCM2-218ENST00000541586 C2orf80Q0P641 193 aa26.36■■□□□ 1.81
CCM2-218ENST00000541586 SAMD4BQ5PRF9 694 aaKnown RBP26.36■■□□□ 1.81
CCM2-218ENST00000541586 CPTPQ5TA50 214 aa26.36■■□□□ 1.81
CCM2-218ENST00000541586 CAMKMTQ7Z624 323 aa26.36■■□□□ 1.81
CCM2-218ENST00000541586 ANKRD46Q86W74 232 aa26.36■■□□□ 1.81
CCM2-218ENST00000541586 GALNT15Q8N3T1 639 aa26.36■■□□□ 1.81
CCM2-218ENST00000541586 OR2L5Q8NG80 312 aa26.36■■□□□ 1.81
CCM2-218ENST00000541586 NT5CQ8TCD5 201 aa26.36■■□□□ 1.81
CCM2-218ENST00000541586 KLHL6Q8WZ60 621 aa26.36■■□□□ 1.81
CCM2-218ENST00000541586 TM4SF19Q96DZ7 209 aa26.36■■□□□ 1.81
CCM2-218ENST00000541586 THAP11Q96EK4 314 aa26.36■■□□□ 1.81
CCM2-218ENST00000541586 PRPF18Q99633 342 aaKnown RBP26.36■■□□□ 1.81
CCM2-218ENST00000541586 CGREF1Q99674 301 aa26.36■■□□□ 1.81
CCM2-218ENST00000541586 TRIM8Q9BZR9 551 aa26.36■■□□□ 1.81
CCM2-218ENST00000541586 FAM60AQ9NP50 221 aa26.36■■□□□ 1.81
CCM2-218ENST00000541586 CMTM6Q9NX76 183 aa26.36■■□□□ 1.81
CCM2-218ENST00000541586 SEMA5BQ9P283 1151 aa26.36■■□□□ 1.81
CCM2-218ENST00000541586 CD300AQ9UGN4 299 aa26.36■■□□□ 1.81
CCM2-218ENST00000541586 ATP6V1HQ9UI12 483 aa26.36■■□□□ 1.81
CCM2-218ENST00000541586 MAN2B2Q9Y2E5 1009 aa26.36■■□□□ 1.81
CCM2-218ENST00000541586 PCDHA9Q9Y5H5 950 aa26.36■■□□□ 1.81
CCM2-218ENST00000541586 SPTBN4Q9H254 2564 aa26.35■■□□□ 1.81
CCM2-218ENST00000541586 PRORSD1PA6NEY8 169 aa26.35■■□□□ 1.81
CCM2-218ENST00000541586 NME4O00746 187 aa26.35■■□□□ 1.81
CCM2-218ENST00000541586 IL3P08700 152 aa26.35■■□□□ 1.81
CCM2-218ENST00000541586 NELFEP18615 380 aaKnown RBP26.35■■□□□ 1.81
CCM2-218ENST00000541586 MSX2P35548 267 aaPredicted RBP26.35■■□□□ 1.81
CCM2-218ENST00000541586 MLLT3P42568 568 aaPredicted RBP26.35■■□□□ 1.81
CCM2-218ENST00000541586 SSR2P43308 183 aa26.35■■□□□ 1.81
CCM2-218ENST00000541586 STXBP1P61764 594 aaKnown RBP26.35■■□□□ 1.81
CCM2-218ENST00000541586 NANOGP8Q6NSW7 305 aa26.35■■□□□ 1.81
CCM2-218ENST00000541586 ABHD17CQ6PCB6 329 aa26.35■■□□□ 1.81
CCM2-218ENST00000541586 IKBIPQ70UQ0 350 aa26.35■■□□□ 1.81
CCM2-218ENST00000541586 RNF44Q7L0R7 432 aa26.35■■□□□ 1.81
CCM2-218ENST00000541586 AMER3Q8N944 861 aa26.35■■□□□ 1.81
CCM2-218ENST00000541586 TMEM125Q96AQ2 219 aa26.35■■□□□ 1.81
CCM2-218ENST00000541586 COQ8BQ96D53 544 aa26.35■■□□□ 1.81
CCM2-218ENST00000541586 ITCHQ96J02 903 aa26.35■■□□□ 1.81
CCM2-218ENST00000541586 CMKLR1Q99788 373 aa26.35■■□□□ 1.81
CCM2-218ENST00000541586 NANOGQ9H9S0 305 aa26.35■■□□□ 1.81
CCM2-218ENST00000541586 AKAP7Q9P0M2 348 aaPredicted RBP26.35■■□□□ 1.81
CCM2-218ENST00000541586 NEUROG3Q9Y4Z2 214 aa26.35■■□□□ 1.81
CCM2-218ENST00000541586 TMX2-CTNND1H3BSU7 103 aa26.34■■□□□ 1.81
CCM2-218ENST00000541586 TMPRSS11DO60235 418 aa26.34■■□□□ 1.81
CCM2-218ENST00000541586 SCN2BO60939 215 aa26.34■■□□□ 1.81
CCM2-218ENST00000541586 ATP6V1G2O95670 118 aa26.34■■□□□ 1.81
CCM2-218ENST00000541586 FURINP09958 794 aa26.34■■□□□ 1.81
CCM2-218ENST00000541586 ANKRD34CP0C6C1 535 aa26.34■■□□□ 1.81
CCM2-218ENST00000541586 TCN1P20061 433 aaPredicted RBP26.34■■□□□ 1.81
CCM2-218ENST00000541586 ACTR3P61158 418 aa26.34■■□□□ 1.81
CCM2-218ENST00000541586 RGS1Q08116 209 aa26.34■■□□□ 1.81
CCM2-218ENST00000541586 FOXC1Q12948 553 aa26.34■■□□□ 1.81
CCM2-218ENST00000541586 RABL3Q5HYI8 236 aa26.34■■□□□ 1.81
CCM2-218ENST00000541586 FRMPD2BQ6IN97 320 aa26.34■■□□□ 1.81
CCM2-218ENST00000541586 ZNF793Q6ZN11 406 aa26.34■■□□□ 1.81
CCM2-218ENST00000541586 DGLUCYQ7Z3D6 616 aa26.34■■□□□ 1.81
CCM2-218ENST00000541586 CARFQ8N187 725 aa26.34■■□□□ 1.81
CCM2-218ENST00000541586 FAM156AQ8NDB6 213 aa26.34■■□□□ 1.81
CCM2-218ENST00000541586 AGBL5Q8NDL9 886 aa26.34■■□□□ 1.81
CCM2-218ENST00000541586 TCTN2Q96GX1 697 aa26.34■■□□□ 1.81
CCM2-218ENST00000541586 KCNC2Q96PR1 638 aa26.34■■□□□ 1.81
CCM2-218ENST00000541586 DUSP26Q9BV47 211 aa26.34■■□□□ 1.81
CCM2-218ENST00000541586 FAM120CQ9NX05 1096 aaKnown RBP26.34■■□□□ 1.81
CCM2-218ENST00000541586 OCIAD1Q9NX40 245 aa26.34■■□□□ 1.81
CCM2-218ENST00000541586 SPTBN2O15020 2390 aa26.34■■□□□ 1.81
CCM2-218ENST00000541586 LOC105369274A0A096LPK9 316 aa26.34■■□□□ 1.81
CCM2-218ENST00000541586 A0A0A6YYD5 115 aa26.34■■□□□ 1.81
CCM2-218ENST00000541586 LOC102723532A0A0G2JNH3 316 aa26.34■■□□□ 1.81
CCM2-218ENST00000541586 HYAL3O43820 417 aaPredicted RBP26.34■■□□□ 1.81
CCM2-218ENST00000541586 SLC35G6P0C7Q6 338 aa26.34■■□□□ 1.81
CCM2-218ENST00000541586 ARFIP1P53367 373 aa26.34■■□□□ 1.81
CCM2-218ENST00000541586 PDE7AQ13946 482 aa26.34■■□□□ 1.81
CCM2-218ENST00000541586 TRIM40Q6P9F5 258 aa26.34■■□□□ 1.81
CCM2-218ENST00000541586 OR4N4Q8N0Y3 316 aa26.34■■□□□ 1.81
CCM2-218ENST00000541586 KCT2Q8NC54 265 aa26.34■■□□□ 1.81
CCM2-218ENST00000541586 SRFBP1Q8NEF9 429 aaKnown RBP26.34■■□□□ 1.81
CCM2-218ENST00000541586 TM4SF18Q96CE8 201 aa26.34■■□□□ 1.81
CCM2-218ENST00000541586 SLC41A2Q96JW4 573 aa26.34■■□□□ 1.81
CCM2-218ENST00000541586 INPP5KQ9BT40 448 aa26.34■■□□□ 1.81
CCM2-218ENST00000541586 PAIP1Q9H074 479 aaKnown RBP26.34■■□□□ 1.81
CCM2-218ENST00000541586 PRDM7Q9NQW5 492 aa26.34■■□□□ 1.81
CCM2-218ENST00000541586 VAPAQ9P0L0 249 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms