RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 GALNT17Q6IS24 598 aa3.85□□□□□ -1.79
SNHG1-217ENST00000541578 UGT3A1Q6NUS8 523 aa3.85□□□□□ -1.79
SNHG1-217ENST00000541578 UNQ6126/PRO20091Q6UXV3 157 aa3.85□□□□□ -1.79
SNHG1-217ENST00000541578 SIGLEC15Q6ZMC9 328 aa3.85□□□□□ -1.79
SNHG1-217ENST00000541578 WDR88Q6ZMY6 472 aa3.85□□□□□ -1.79
SNHG1-217ENST00000541578 USP50Q70EL3 339 aaPredicted RBP3.85□□□□□ -1.79
SNHG1-217ENST00000541578 ASPGQ86U10 573 aa3.85□□□□□ -1.79
SNHG1-217ENST00000541578 ZNF114Q8NC26 417 aa3.85□□□□□ -1.79
SNHG1-217ENST00000541578 TMEM185AQ8NFB2 350 aa3.85□□□□□ -1.79
SNHG1-217ENST00000541578 SPATA22Q8NHS9 363 aa3.85□□□□□ -1.79
SNHG1-217ENST00000541578 ZNF473Q8WTR7 871 aaKnown RBP3.85□□□□□ -1.79
SNHG1-217ENST00000541578 PHLDA1Q8WV24 401 aaPredicted RBP3.85□□□□□ -1.79
SNHG1-217ENST00000541578 LGALS12Q96DT0 336 aa3.85□□□□□ -1.79
SNHG1-217ENST00000541578 TRIM44Q96DX7 344 aaPredicted RBP3.85□□□□□ -1.79
SNHG1-217ENST00000541578 VPS39Q96JC1 886 aa3.85□□□□□ -1.79
SNHG1-217ENST00000541578 BTBD9Q96Q07 612 aa3.85□□□□□ -1.79
SNHG1-217ENST00000541578 RASL10BQ96S79 203 aa3.85□□□□□ -1.79
SNHG1-217ENST00000541578 LRRC2Q9BYS8 371 aa3.85□□□□□ -1.79
SNHG1-217ENST00000541578 NACA2Q9H009 215 aa3.85□□□□□ -1.79
SNHG1-217ENST00000541578 CSTL1Q9H114 145 aa3.85□□□□□ -1.79
SNHG1-217ENST00000541578 TMEM245Q9H330 911 aa3.85□□□□□ -1.79
SNHG1-217ENST00000541578 GAREM1Q9H706 876 aa3.85□□□□□ -1.79
SNHG1-217ENST00000541578 LIN28AQ9H9Z2 209 aaKnown RBP3.85□□□□□ -1.79
SNHG1-217ENST00000541578 PNPLA3Q9NST1 481 aa3.85□□□□□ -1.79
SNHG1-217ENST00000541578 AATFQ9NY61 560 aaKnown RBP eCLIP3.85□□□□□ -1.791e-323■■■□□ 16.4
SNHG1-217ENST00000541578 FOXA2Q9Y261 457 aaPredicted RBP3.85□□□□□ -1.79
SNHG1-217ENST00000541578 AFDNP55196 1824 aaKnown RBP3.85□□□□□ -1.79
SNHG1-217ENST00000541578 IL16Q14005 1332 aa3.85□□□□□ -1.79
SNHG1-217ENST00000541578 INSRP06213 1382 aa3.85□□□□□ -1.79
SNHG1-217ENST00000541578 MYH14Q7Z406 1995 aaKnown RBP3.85□□□□□ -1.79
SNHG1-217ENST00000541578 TIAM2Q8IVF5 1701 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 SAA2-SAA4A0A096LPE2 208 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 A0A1W2PN81 502 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 M0R296 226 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 TLR4O00206 839 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 SLC28A1O00337 649 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 PSMD3O43242 534 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 AKR7A3O95154 331 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 OR6A2O95222 327 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 IGKV3-20P01619 116 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 APOHP02749 345 aaPredicted RBP3.84□□□□□ -1.79
SNHG1-217ENST00000541578 NR3C1P04150 777 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 SFTPBP07988 381 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 KRT5P13647 590 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 LHCGRP22888 699 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 ALDH4A1P30038 563 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 CCND2P30279 289 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 ALDH1B1P30837 517 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 CHRNA7P36544 502 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 OR3A1P47881 315 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 HOXA1P49639 335 aaPredicted RBP3.84□□□□□ -1.79
SNHG1-217ENST00000541578 MTTPP55157 894 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 CLDN15P56746 228 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 RPP38P78345 283 aaKnown RBP3.84□□□□□ -1.79
SNHG1-217ENST00000541578 TAF10Q12962 218 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 DMP1Q13316 513 aaPredicted RBP3.84□□□□□ -1.79
SNHG1-217ENST00000541578 ITPK1Q13572 414 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 ZNF718Q3SXZ3 478 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 ZNF672Q499Z4 452 aaPredicted RBP3.84□□□□□ -1.79
SNHG1-217ENST00000541578 FAM76BQ5HYJ3 339 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 LCN1P1Q5VSP4 162 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 IRGCQ6NXR0 463 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 AFTPHQ6ULP2 937 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 CD164L2Q6UWJ8 174 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 SMIM5Q71RC9 77 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 PRUNE1Q86TP1 453 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 PLD3Q8IV08 490 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 ELMOD2Q8IZ81 293 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 GPC2Q8N158 579 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 METTL27Q8N6F8 245 aaPredicted RBP3.84□□□□□ -1.79
SNHG1-217ENST00000541578 LMNTD1Q8N9Z9 388 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 OR2T12Q8NG77 320 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 OR52E1Q8NGJ3 308 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 TMEM186Q96B77 213 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 LRRC1Q9BTT6 524 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 ATG10Q9H0Y0 220 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 MTIF3Q9H2K0 278 aaKnown RBP3.84□□□□□ -1.79
SNHG1-217ENST00000541578 TSPY26PQ9H489 355 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 TLE6Q9H808 572 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 A4GALTQ9NPC4 353 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 HOMER3Q9NSC5 361 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 EXOC1Q9NV70 894 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 NARFQ9UHQ1 456 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 TEKT2Q9UIF3 430 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 FAF1Q9UNN5 650 aaPredicted RBP3.84□□□□□ -1.79
SNHG1-217ENST00000541578 EXOC7Q9UPT5 735 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 TNNQ9UQP3 1299 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 SH3GLB1Q9Y371 365 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 ATP6V0A2Q9Y487 856 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 KLK4Q9Y5K2 254 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 R4GN57 208 aa3.84□□□□□ -1.79
SNHG1-217ENST00000541578 USP42Q9H9J4 1324 aaKnown RBP3.84□□□□□ -1.79
SNHG1-217ENST00000541578 DLEC1Q9Y238 1755 aa3.84□□□□□ -1.8
SNHG1-217ENST00000541578 IGLV5-45A0A087WSX0 123 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 A0A1W2PPI3 338 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 CCDC162PA2VCL2 907 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 ASPDHA6ND91 283 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 SLC15A5A6NIM6 579 aa3.83□□□□□ -1.8
SNHG1-217ENST00000541578 EEF2KO00418 725 aaKnown RBP3.83□□□□□ -1.8
SNHG1-217ENST00000541578 EPHB6O15197 1021 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms