RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 QRFPRQ96P65 431 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 RASL10BQ96S79 203 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 SMC6Q96SB8 1091 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 NAPGQ99747 312 aaPredicted RBP6.77□□□□□ -1.33
YBX3-209ENST00000540747 SH3GL2Q99962 352 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 GPATCH1Q9BRR8 931 aaKnown RBP6.77□□□□□ -1.33
YBX3-209ENST00000540747 POLDIP3Q9BY77 421 aaKnown RBP6.77□□□□□ -1.33
YBX3-209ENST00000540747 CCDC68Q9H2F9 335 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 CLEC4MQ9H2X3 399 aaPredicted RBP6.77□□□□□ -1.33
YBX3-209ENST00000540747 PELI2Q9HAT8 420 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 IL1RL2Q9HB29 575 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 PLAC1Q9HBJ0 212 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 XAB2Q9HCS7 855 aaKnown RBP6.77□□□□□ -1.33
YBX3-209ENST00000540747 CRIM1Q9NZV1 1036 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 MYOTQ9UBF9 498 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 TRMT6Q9UJA5 497 aaKnown RBP6.77□□□□□ -1.33
YBX3-209ENST00000540747 FBXW2Q9UKT8 454 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 IKZF3Q9UKT9 509 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 PLEKHA6Q9Y2H5 1048 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 MXRA5Q9NR99 2828 aa6.77□□□□□ -1.33
YBX3-209ENST00000540747 A6NNC1 897 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 A8MVJ9 347 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 ACOT7O00154 380 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 SYT5O00445 386 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 CYR61O00622 381 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 WDR1O75083 606 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 ERLIN1O75477 346 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 ZFAND5O76080 213 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 ATE1O95260 518 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 FGGP02679 453 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 TUBBP07437 444 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 DRD2P14416 443 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 HNRNPH1P31943 449 aaKnown RBP6.76□□□□□ -1.33
YBX3-209ENST00000540747 MAGEA5P43359 124 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 RGS4P49798 205 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 HK2P52789 917 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 PPP2R2AP63151 447 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 DAZAP2Q15038 168 aaPredicted RBP6.76□□□□□ -1.33
YBX3-209ENST00000540747 TRIP13Q15645 432 aaPredicted RBP6.76□□□□□ -1.33
YBX3-209ENST00000540747 ELAVL1Q15717 326 aaKnown RBP6.76□□□□□ -1.33
YBX3-209ENST00000540747 WHAMMP3Q1A5X7 153 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 ADPRMQ3LIE5 342 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 HSP90AA5PQ58FG0 334 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 C1orf185Q5T7R7 199 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 CASC4Q6P4E1 433 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 PAOXQ6QHF9 649 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 NXPE4Q6UWF7 544 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 GK5Q6ZS86 529 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 GALNT7Q86SF2 657 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 BIVMQ86UB2 503 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 SLC22A16Q86VW1 577 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 KLHDC8AQ8IYD2 350 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 MYO1HQ8N1T3 1032 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 SLC35F6Q8N357 371 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 GOLM1Q8NBJ4 401 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 RELL2Q8NC24 303 aaPredicted RBP6.76□□□□□ -1.33
YBX3-209ENST00000540747 ARMC2Q8NEN0 867 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 TRPV3Q8NET8 790 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 OR8K3Q8NH51 312 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 CALML6Q8TD86 181 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 PTPMT1Q8WUK0 201 aaPredicted RBP6.76□□□□□ -1.33
YBX3-209ENST00000540747 SLCO2A1Q92959 643 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 GAL3ST3Q96A11 431 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 ARSGQ96EG1 525 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 LINGO1Q96FE5 620 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 RMND5BQ96G75 393 aaPredicted RBP6.76□□□□□ -1.33
YBX3-209ENST00000540747 SCYL1Q96KG9 808 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 NDNQ99608 321 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 FAM173AQ9BQD7 235 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 FAM167BQ9BTA0 163 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 NPLQ9BXD5 320 aaPredicted RBP6.76□□□□□ -1.33
YBX3-209ENST00000540747 LIN28AQ9H9Z2 209 aaKnown RBP6.76□□□□□ -1.33
YBX3-209ENST00000540747 ADAP2Q9NPF8 381 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 SEMA4BQ9NPR2 832 aaPredicted RBP6.76□□□□□ -1.33
YBX3-209ENST00000540747 C20orf96Q9NUD7 363 aaPredicted RBP6.76□□□□□ -1.33
YBX3-209ENST00000540747 HPF1Q9NWY4 346 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 ARL15Q9NXU5 204 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 TAS2R13Q9NYV9 303 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 SAMD15Q9P1V8 674 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 SPRR3Q9UBC9 169 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 CBLCQ9ULV8 474 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 PCDHGB3Q9Y5G1 929 aa6.76□□□□□ -1.33
YBX3-209ENST00000540747 URADA6NGE7 173 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 LRRC3CA6NJW4 275 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 G3V3Y1 287 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 PSMD12O00232 456 aaPredicted RBP6.75□□□□□ -1.33
YBX3-209ENST00000540747 HCN1O60741 890 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 SERPIND1P05546 499 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 ENO2P09104 434 aaPredicted RBP6.75□□□□□ -1.33
YBX3-209ENST00000540747 CTAGE8P0CG41 777 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 CCL3P10147 92 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 CNR1P21554 472 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 DNASE1P24855 282 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 HOXC12P31275 282 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 CEACAM8P31997 349 aaPredicted RBP6.75□□□□□ -1.33
YBX3-209ENST00000540747 PEX19P40855 299 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 HNF4AP41235 474 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 KIR2DL3P43628 341 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 VPS41P49754 854 aa6.75□□□□□ -1.33
YBX3-209ENST00000540747 PGGT1BP53609 377 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 180.5 ms