RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 ZNF670-ZNF695F2Z2N8 137 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 MEN1O00255 615 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 EIF3FO00303 357 aaPredicted RBP13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 INPPL1O15357 1258 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 SEMA7AO75326 666 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 ZNF821O75541 412 aaPredicted RBP13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 YES1P07947 543 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 CBSLP0DN79 551 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 CBSP35520 551 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 SLC11A1P49279 550 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 STK19P49842 368 aaPredicted RBP13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 AP1S1P61966 158 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 RPS13P62277 151 aaKnown RBP13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 SCN1BQ07699 218 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 PLD1Q13393 1074 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 GCNT6Q5T4J0 391 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 SAXO2Q658L1 398 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 FUT10Q6P4F1 479 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 YIPF7Q8N8F6 280 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 VPS37AQ8NEZ2 397 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 HUS1BQ8NHY5 278 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 LINC00597Q9H2U6 94 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 SLC25A19Q9HC21 320 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 ACOXLQ9NUZ1 547 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 CNOT2Q9NZN8 540 aaKnown RBP13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 BTNL2Q9UIR0 455 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 CARD8Q9Y2G2 431 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 TLR4O00206 839 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 PRMT3O60678 531 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 CCNYL3P0C7X3 344 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 IFI30P13284 250 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 ZNF8P17098 575 aaPredicted RBP13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 RUNX1T1Q06455 604 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 TSTA3Q13630 321 aaPredicted RBP13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 PUM1Q14671 1186 aaKnown RBP eCLIP13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 PYDC2Q56P42 97 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 TAGAPQ8N103 731 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 SIX5Q8N196 739 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 ZNF557Q8N988 423 aaPredicted RBP13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 TTLL2Q9BWV7 592 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 SLC22A4Q9H015 551 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 C1GALT1Q9NS00 363 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 PLEKHB1Q9UF11 243 aaPredicted RBP13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 SNX7Q9UNH6 387 aa13.31□□□□□ -0.28
SCNN1A-215ENST00000540037 AGAP14A8MT82 685 aa13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 GFYI3L273 518 aa13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 C8GP07360 202 aa13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 HMGA1P17096 107 aaKnown RBP13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 WEE1P30291 646 aa13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 CTSOP43234 321 aaPredicted RBP13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 CSNK1DP48730 415 aa13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 HNMTP50135 292 aa13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 P2RX3P56373 397 aa13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 SMAD3P84022 425 aaKnown RBP13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 CDK6Q00534 326 aa13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 NFE2L1Q14494 772 aa13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 TRIM71Q2Q1W2 868 aaKnown RBP13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 TOR1AIP1Q5JTV8 583 aa13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 KRT73Q86Y46 540 aa13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 RBM45Q8IUH3 476 aaKnown RBP13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 PHC2Q8IXK0 858 aa13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 SNAPC3Q92966 411 aa13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 SCAMP4Q969E2 229 aa13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 VOPP1Q96AW1 172 aa13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 PLD4Q96BZ4 506 aa13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 SLA2Q9H6Q3 261 aa13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 TOR4AQ9NXH8 423 aa13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 CLCA3PQ9Y6N3 262 aa13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 A0A0C4DFX4 3053 aa13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 ARHGEF33A8MVX0 844 aa13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 H3BN98 237 aa13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 TPST2O60704 377 aa13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 OR56A5P0C7T3 313 aa13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 APEX1P27695 318 aaKnown RBP13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 CSTF2P33240 577 aaKnown RBP eCLIP13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 OR1D2P34982 312 aa13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 LSM11P83369 360 aaKnown RBP eCLIP13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 CYP4F8P98187 520 aa13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 SLC35F1Q5T1Q4 408 aa13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 LYPLAL1Q5VWZ2 237 aa13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 ZNF770Q6IQ21 691 aaPredicted RBP13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 TCEANCQ8N8B7 351 aa13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 FAM46DQ8NEK8 389 aa13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 ATP6V1C2Q8NEY4 427 aa13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 OR7G3Q8NG95 312 aa13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 FRMD6Q96NE9 622 aa13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 RNF121Q9H920 327 aa13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 THSD1Q9NS62 852 aa13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 TXNL4BQ9NX01 149 aaKnown RBP13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 NDRG2Q9UN36 371 aaKnown RBP13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 STUB1Q9UNE7 303 aa13.3□□□□□ -0.28
SCNN1A-215ENST00000540037 SH3D21A4FU49 640 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 TSPAN19P0C672 248 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 SDC2P34741 201 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 SOAT1P35610 550 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 PREPP48147 710 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 ZNF91Q05481 1191 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 LRRC74AQ0VAA2 488 aa13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 TAF1CQ15572 869 aaPredicted RBP13.29□□□□□ -0.28
SCNN1A-215ENST00000540037 PDZK1Q5T2W1 519 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms