RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 FAM182AQ5T1J6 154 aa16.18■□□□□ 0.18
SCARB1-205ENST00000538291 SWT1Q5T5J6 900 aaKnown RBP16.18■□□□□ 0.18
SCARB1-205ENST00000538291 KCTD18Q6PI47 426 aaPredicted RBP16.18■□□□□ 0.18
SCARB1-205ENST00000538291 CSNK1A1LQ8N752 337 aa16.18■□□□□ 0.18
SCARB1-205ENST00000538291 OR5L2Q8NGL0 311 aa16.18■□□□□ 0.18
SCARB1-205ENST00000538291 OR2L2Q8NH16 312 aa16.18■□□□□ 0.18
SCARB1-205ENST00000538291 VRTNQ9H8Y1 702 aa16.18■□□□□ 0.18
SCARB1-205ENST00000538291 HNRNPKP61978 463 aaKnown RBP eCLIP16.18■□□□□ 0.181e-6■■■■□ 22.7
SCARB1-205ENST00000538291 BLMHQ13867 455 aa16.18■□□□□ 0.18
SCARB1-205ENST00000538291 OR5T2Q8NGG2 359 aa16.18■□□□□ 0.18
SCARB1-205ENST00000538291 PCDH10Q9P2E7 1040 aa16.18■□□□□ 0.18
SCARB1-205ENST00000538291 ZSCAN5BA6NJL1 495 aa16.18■□□□□ 0.18
SCARB1-205ENST00000538291 SOX30O94993 753 aa16.18■□□□□ 0.18
SCARB1-205ENST00000538291 BCKDHAP12694 445 aa16.18■□□□□ 0.18
SCARB1-205ENST00000538291 ADAM15Q13444 863 aa16.18■□□□□ 0.18
SCARB1-205ENST00000538291 CDK10Q15131 360 aa16.18■□□□□ 0.18
SCARB1-205ENST00000538291 RABL3Q5HYI8 236 aa16.18■□□□□ 0.18
SCARB1-205ENST00000538291 CATSPEREQ5SY80 951 aa16.18■□□□□ 0.18
SCARB1-205ENST00000538291 SLC25A25Q6KCM7 469 aa16.18■□□□□ 0.18
SCARB1-205ENST00000538291 S100A16Q96FQ6 103 aaKnown RBP16.18■□□□□ 0.18
SCARB1-205ENST00000538291 SLC2A13Q96QE2 648 aa16.18■□□□□ 0.18
SCARB1-205ENST00000538291 C11orf98E9PRG8 122 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 H3BSH0 61 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 H3BUI4 141 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 EMC8O43402 210 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 ZNF821O75541 412 aaPredicted RBP16.17■□□□□ 0.18
SCARB1-205ENST00000538291 SPARCP09486 303 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 ATP4BP51164 291 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 RPS15AP62244 130 aaKnown RBP16.17■□□□□ 0.18
SCARB1-205ENST00000538291 ALDH16A1Q8IZ83 802 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 THAP6Q8TBB0 222 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 SLC22A8Q8TCC7 542 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 PLEKHO2Q8TD55 490 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 DPAGT1Q9H3H5 408 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 ZNF69Q9UC07 566 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 EXOSC1Q9Y3B2 195 aaKnown RBP16.17■□□□□ 0.18
SCARB1-205ENST00000538291 OARD1Q9Y530 152 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 C1orf226A1L170 272 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 IGLON5A6NGN9 336 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 HSD3B1P14060 373 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 HSD3B2P26439 372 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 EIF2S3P41091 472 aaKnown RBP16.17■□□□□ 0.18
SCARB1-205ENST00000538291 AGTR2P50052 363 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 RPS3AP61247 264 aaKnown RBP16.17■□□□□ 0.18
SCARB1-205ENST00000538291 SGCAQ16586 387 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 PLEKHG7Q6ZR37 379 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 ZER1Q7Z7L7 766 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 GLIS1Q8NBF1 620 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 TXNDC5Q8NBS9 432 aaKnown RBP16.17■□□□□ 0.18
SCARB1-205ENST00000538291 CCDC120Q96HB5 630 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 OR1F2PQ96R84 312 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 RHCGQ9UBD6 479 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 LIPT1Q9Y234 373 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 PIAS3Q9Y6X2 628 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 SH3PXD2BA1X283 911 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 PLD2O14939 933 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 ZNF217O75362 1048 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 BPNT1O95861 308 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 CD9P21926 228 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 ENTPD1P49961 510 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 S100A10P60903 97 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 GSTM4Q03013 218 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 SNX29P2Q8IUI4 249 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 NUP43Q8NFH3 380 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 OR10Q1Q8NGQ4 319 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 IGSF8Q969P0 613 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 HERC2P3Q9BVR0 1158 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 TMEM184CQ9NVA4 438 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 CDH10Q9Y6N8 788 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 C2orf78A6NCI8 922 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 DISC1C4P0D8 188 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 STC2O76061 302 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 CHRM1P11229 460 aaPredicted RBP16.17■□□□□ 0.18
SCARB1-205ENST00000538291 C5AR1P21730 350 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 BMPR1AP36894 532 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 RAB28P51157 221 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 SLAMF1Q13291 335 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 ZNF648Q5T619 568 aaPredicted RBP16.17■□□□□ 0.18
SCARB1-205ENST00000538291 KIAA1614Q5VZ46 1190 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 RPS27LQ71UM5 84 aaKnown RBP16.17■□□□□ 0.18
SCARB1-205ENST00000538291 PLXDC1Q8IUK5 500 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 GID4Q8IVV7 300 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 FOXRED2Q8IWF2 684 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 PCYT2Q99447 389 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 DPH7Q9BTV6 452 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 NKX2-4Q9H2Z4 354 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 FBRSQ9HAH7 460 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 POU2F3Q9UKI9 436 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 PARP4Q9UKK3 1724 aaKnown RBP16.17■□□□□ 0.18
SCARB1-205ENST00000538291 IL3P08700 152 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 OR2B6P58173 313 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 TUBA3CQ13748 450 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 PCLAFQ15004 111 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 CST6Q15828 149 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 ZC3H14Q6PJT7 736 aaKnown RBP16.17■□□□□ 0.18
SCARB1-205ENST00000538291 GALNT12Q8IXK2 581 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 TCEANCQ8N8B7 351 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 THAP3Q8WTV1 239 aaPredicted RBP16.17■□□□□ 0.18
SCARB1-205ENST00000538291 SLC5A7Q9GZV3 580 aa16.17■□□□□ 0.18
SCARB1-205ENST00000538291 TUBA8Q9NY65 449 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms