RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 ANXA4P09525 319 aaPredicted RBP16.48■□□□□ 0.23
NXF1-216ENST00000533499 ZGLP1P0C6A0 271 aa16.48■□□□□ 0.23
NXF1-216ENST00000533499 F8A1P23610 371 aa16.48■□□□□ 0.23
NXF1-216ENST00000533499 TPP2P29144 1249 aaPredicted RBP16.48■□□□□ 0.23
NXF1-216ENST00000533499 TIA1P31483 386 aaKnown RBP eCLIP16.48■□□□□ 0.23
NXF1-216ENST00000533499 TSFMP43897 325 aaKnown RBP16.48■□□□□ 0.23
NXF1-216ENST00000533499 ARFIP1P53367 373 aa16.48■□□□□ 0.23
NXF1-216ENST00000533499 RAB38P57729 211 aa16.48■□□□□ 0.23
NXF1-216ENST00000533499 XKR7Q5GH72 579 aa16.48■□□□□ 0.23
NXF1-216ENST00000533499 RGS9BPQ6ZS82 235 aa16.48■□□□□ 0.23
NXF1-216ENST00000533499 GPR180Q86V85 440 aa16.48■□□□□ 0.23
NXF1-216ENST00000533499 ZC3H7AQ8IWR0 971 aaKnown RBP16.48■□□□□ 0.23
NXF1-216ENST00000533499 ZCCHC7Q8N3Z6 543 aaKnown RBP16.48■□□□□ 0.23
NXF1-216ENST00000533499 FNDC5Q8NAU1 212 aa16.48■□□□□ 0.23
NXF1-216ENST00000533499 TBC1D20Q96BZ9 403 aa16.48■□□□□ 0.23
NXF1-216ENST00000533499 CSF3RQ99062 836 aa16.48■□□□□ 0.23
NXF1-216ENST00000533499 CRB3Q9BUF7 120 aa16.48■□□□□ 0.23
NXF1-216ENST00000533499 ZNF717Q9BY31 904 aaPredicted RBP16.48■□□□□ 0.23
NXF1-216ENST00000533499 ACTL8Q9H568 366 aa16.48■□□□□ 0.23
NXF1-216ENST00000533499 WDR55Q9H6Y2 383 aaPredicted RBP16.48■□□□□ 0.23
NXF1-216ENST00000533499 FGFR1OP2Q9NVK5 253 aa16.48■□□□□ 0.23
NXF1-216ENST00000533499 DKK4Q9UBT3 224 aa16.48■□□□□ 0.23
NXF1-216ENST00000533499 PHF11Q9UIL8 331 aa16.48■□□□□ 0.23
NXF1-216ENST00000533499 KCND3Q9UK17 655 aa16.48■□□□□ 0.23
NXF1-216ENST00000533499 MKL2Q9ULH7 1088 aa16.48■□□□□ 0.23
NXF1-216ENST00000533499 DAPP1Q9UN19 280 aa16.48■□□□□ 0.23
NXF1-216ENST00000533499 MRPS33Q9Y291 106 aaKnown RBP16.48■□□□□ 0.23
NXF1-216ENST00000533499 IGF2RP11717 2491 aa16.48■□□□□ 0.23
NXF1-216ENST00000533499 URB1O60287 2271 aaKnown RBP16.47■□□□□ 0.23
NXF1-216ENST00000533499 A0A0A6YYD5 115 aa16.47■□□□□ 0.23
NXF1-216ENST00000533499 OR2W5A6NFC9 320 aa16.47■□□□□ 0.23
NXF1-216ENST00000533499 C21orf140B9A014 251 aa16.47■□□□□ 0.23
NXF1-216ENST00000533499 LSM1O15116 133 aaKnown RBP16.47■□□□□ 0.23
NXF1-216ENST00000533499 EDF1O60869 148 aaKnown RBP16.47■□□□□ 0.23
NXF1-216ENST00000533499 CNOT3O75175 753 aaKnown RBP16.47■□□□□ 0.23
NXF1-216ENST00000533499 ALBP02768 609 aa16.47■□□□□ 0.23
NXF1-216ENST00000533499 FHP07954 510 aa16.47■□□□□ 0.23
NXF1-216ENST00000533499 CD63P08962 238 aa16.47■□□□□ 0.23
NXF1-216ENST00000533499 RAB40ALP0C0E4 278 aa16.47■□□□□ 0.23
NXF1-216ENST00000533499 PTPN4P29074 926 aa16.47■□□□□ 0.23
NXF1-216ENST00000533499 TLX1P31314 330 aaPredicted RBP16.47■□□□□ 0.23
NXF1-216ENST00000533499 OTX2P32243 289 aa16.47■□□□□ 0.23
NXF1-216ENST00000533499 EIF2S3P41091 472 aaKnown RBP16.47■□□□□ 0.23
NXF1-216ENST00000533499 ALDH9A1P49189 494 aa16.47■□□□□ 0.23
NXF1-216ENST00000533499 HNRNPH2P55795 449 aaKnown RBP16.47■□□□□ 0.23
NXF1-216ENST00000533499 KLC1Q07866 573 aa16.47■□□□□ 0.23
NXF1-216ENST00000533499 NOXRED1Q6NXP6 359 aa16.47■□□□□ 0.23
NXF1-216ENST00000533499 MRPL14Q6P1L8 145 aaKnown RBP16.47■□□□□ 0.23
NXF1-216ENST00000533499 ZNF517Q6ZMY9 492 aaPredicted RBP16.47■□□□□ 0.23
NXF1-216ENST00000533499 TMEM151BQ8IW70 566 aa16.47■□□□□ 0.23
NXF1-216ENST00000533499 EFHD1Q9BUP0 239 aa16.47■□□□□ 0.23
NXF1-216ENST00000533499 GPR87Q9BY21 358 aa16.47■□□□□ 0.23
NXF1-216ENST00000533499 AKTIPQ9H8T0 292 aa16.47■□□□□ 0.23
NXF1-216ENST00000533499 WDR41Q9HAD4 459 aa16.47■□□□□ 0.23
NXF1-216ENST00000533499 CLK4Q9HAZ1 481 aaKnown RBP16.47■□□□□ 0.23
NXF1-216ENST00000533499 LYRM4Q9HD34 91 aa16.47■□□□□ 0.23
NXF1-216ENST00000533499 NPHS2Q9NP85 383 aa16.47■□□□□ 0.23
NXF1-216ENST00000533499 C14orf105Q9NVL8 296 aa16.47■□□□□ 0.23
NXF1-216ENST00000533499 MCM8Q9UJA3 840 aa16.47■□□□□ 0.23
NXF1-216ENST00000533499 C3orf18Q9UK00 162 aa16.47■□□□□ 0.23
NXF1-216ENST00000533499 ADAM29Q9UKF5 820 aa16.47■□□□□ 0.23
NXF1-216ENST00000533499 NXT1Q9UKK6 140 aaKnown RBP16.47■□□□□ 0.23
NXF1-216ENST00000533499 TCFL5Q9UL49 500 aa16.47■□□□□ 0.23
NXF1-216ENST00000533499 CCL27Q9Y4X3 112 aa16.47■□□□□ 0.23
NXF1-216ENST00000533499 GLOD5A6NK44 160 aa16.46■□□□□ 0.23
NXF1-216ENST00000533499 GUCY1B2O75343 617 aa16.46■□□□□ 0.23
NXF1-216ENST00000533499 PRKRAO75569 313 aaKnown RBP16.46■□□□□ 0.23
NXF1-216ENST00000533499 SCELO95171 688 aa16.46■□□□□ 0.23
NXF1-216ENST00000533499 BMP10O95393 424 aa16.46■□□□□ 0.23
NXF1-216ENST00000533499 ONECUT2O95948 504 aa16.46■□□□□ 0.23
NXF1-216ENST00000533499 JAK1P23458 1154 aa16.46■□□□□ 0.23
NXF1-216ENST00000533499 MAPK1P28482 360 aa16.46■□□□□ 0.23
NXF1-216ENST00000533499 EPHA3P29320 983 aa16.46■□□□□ 0.23
NXF1-216ENST00000533499 BUD31P41223 144 aaPredicted RBP16.46■□□□□ 0.23
NXF1-216ENST00000533499 HK2P52789 917 aa16.46■□□□□ 0.23
NXF1-216ENST00000533499 EMP2P54851 167 aa16.46■□□□□ 0.23
NXF1-216ENST00000533499 AQP5P55064 265 aa16.46■□□□□ 0.23
NXF1-216ENST00000533499 GNGT1P63211 74 aa16.46■□□□□ 0.23
NXF1-216ENST00000533499 RAE1P78406 368 aaKnown RBP16.46■□□□□ 0.23
NXF1-216ENST00000533499 SLC13A2Q13183 592 aa16.46■□□□□ 0.23
NXF1-216ENST00000533499 RFTN2Q52LD8 501 aaPredicted RBP16.46■□□□□ 0.23
NXF1-216ENST00000533499 C6orf136Q5SQH8 315 aa16.46■□□□□ 0.23
NXF1-216ENST00000533499 C18orf63Q68DL7 685 aa16.46■□□□□ 0.23
NXF1-216ENST00000533499 RNF165Q6ZSG1 346 aa16.46■□□□□ 0.23
NXF1-216ENST00000533499 CLNKQ7Z7G1 428 aa16.46■□□□□ 0.23
NXF1-216ENST00000533499 LAPTM4BQ86VI4 370 aa16.46■□□□□ 0.23
NXF1-216ENST00000533499 LRRC34Q8IZ02 419 aa16.46■□□□□ 0.23
NXF1-216ENST00000533499 CLHC1Q8NHS4 586 aa16.46■□□□□ 0.23
NXF1-216ENST00000533499 ADAMTS18Q8TE60 1221 aa16.46■□□□□ 0.23
NXF1-216ENST00000533499 DPH1Q9BZG8 443 aa16.46■□□□□ 0.23
NXF1-216ENST00000533499 MEAF6Q9HAF1 191 aa16.46■□□□□ 0.23
NXF1-216ENST00000533499 PRTFDC1Q9NRG1 225 aa16.46■□□□□ 0.23
NXF1-216ENST00000533499 DCTN4Q9UJW0 460 aa16.46■□□□□ 0.23
NXF1-216ENST00000533499 G3BP2Q9UN86 482 aaKnown RBP16.46■□□□□ 0.23
NXF1-216ENST00000533499 EIF3LQ9Y262 564 aaKnown RBP16.46■□□□□ 0.23
NXF1-216ENST00000533499 ATG4BQ9Y4P1 393 aa16.46■□□□□ 0.23
NXF1-216ENST00000533499 CHD8Q9HCK8 2581 aa16.46■□□□□ 0.23
NXF1-216ENST00000533499 MYOCOSA0A1B0GUC4 107 aa16.45■□□□□ 0.22
NXF1-216ENST00000533499 CLDN4O14493 209 aa16.45■□□□□ 0.22
NXF1-216ENST00000533499 SDHDO14521 159 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms