RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 RPL26P61254 145 aaKnown RBP11.77□□□□□ -0.53
BDNF-218ENST00000533246 FPGSQ05932 587 aa11.77□□□□□ -0.53
BDNF-218ENST00000533246 VMACQ2NL98 169 aa11.77□□□□□ -0.53
BDNF-218ENST00000533246 KCTD11Q693B1 232 aa11.77□□□□□ -0.53
BDNF-218ENST00000533246 DEFB119Q8N690 84 aa11.77□□□□□ -0.53
BDNF-218ENST00000533246 TCEANCQ8N8B7 351 aa11.77□□□□□ -0.53
BDNF-218ENST00000533246 ZFP3Q96NJ6 502 aa11.77□□□□□ -0.53
BDNF-218ENST00000533246 SLC30A3Q99726 388 aa11.77□□□□□ -0.53
BDNF-218ENST00000533246 RBCK1Q9BYM8 510 aa11.77□□□□□ -0.53
BDNF-218ENST00000533246 TMEM27Q9HBJ8 222 aa11.77□□□□□ -0.53
BDNF-218ENST00000533246 TOGARAM1Q9Y4F4 1720 aa11.77□□□□□ -0.53
BDNF-218ENST00000533246 A0A1W2PP55 124 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 FEZF1A0PJY2 475 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 WASH3PC4AMC7 463 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 INMTO95050 263 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 ZNF30P17039 623 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 FSHRP23945 695 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 SPINT3P49223 89 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 SPIN4Q56A73 249 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 LARP4Q71RC2 724 aaKnown RBP eCLIP11.76□□□□□ -0.53
BDNF-218ENST00000533246 ZFAND4Q86XD8 727 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 SCRN2Q96FV2 425 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 ALPK1Q96QP1 1244 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 CLSTN3Q9BQT9 956 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 PDCD10Q9BUL8 212 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 TTTY10Q9BZA0 68 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 ERVK-18Q9QC07 812 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 ZNF222Q9UK12 451 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 METTL21EPA6NDL7 271 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 H3BNH8 94 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 SLC30A4O14863 429 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 DNAJB5O75953 348 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 SNRPD2P62316 118 aaKnown RBP11.76□□□□□ -0.53
BDNF-218ENST00000533246 ZNF763Q0D2J5 394 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 TBRG1Q3YBR2 411 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 AMZ1Q400G9 498 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 ZNF805Q5CZA5 627 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 ZNF542PQ5EBM4 170 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 FAM219BQ5XKK7 198 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 NADSYN1Q6IA69 706 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 SLC8B1Q6J4K2 584 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 GPR135Q8IZ08 494 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 CELF5Q8N6W0 485 aaKnown RBP11.76□□□□□ -0.53
BDNF-218ENST00000533246 HUS1BQ8NHY5 278 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 TUBA1CQ9BQE3 449 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 RTP3Q9BQQ7 232 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 SLITRK2Q9H156 845 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 PCDHB16Q9NRJ7 776 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 NUP50Q9UKX7 468 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 OARD1Q9Y530 152 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 PCDHB14Q9Y5E9 798 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 FCER2P06734 321 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 H1F0P07305 194 aaKnown RBP11.76□□□□□ -0.53
BDNF-218ENST00000533246 IL3P08700 152 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 CKMT1AP12532 417 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 GPX3P22352 226 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 MYL9P24844 172 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 CSTF2P33240 577 aaKnown RBP eCLIP11.76□□□□□ -0.53
BDNF-218ENST00000533246 MPIP34949 423 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 CPOXP36551 454 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 TMEM236Q5W0B7 351 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 MZT2BQ6NZ67 158 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 OR6K6Q8NGW6 343 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 RIT1Q92963 219 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 POP5Q969H6 163 aaKnown RBP11.76□□□□□ -0.53
BDNF-218ENST00000533246 RGMAQ96B86 450 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 FAM120CQ9NX05 1096 aaKnown RBP11.76□□□□□ -0.53
BDNF-218ENST00000533246 PRSS21Q9Y6M0 314 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 COL4A1P02462 1669 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.76□□□□□ -0.53
BDNF-218ENST00000533246 RPLP0P05388 317 aaKnown RBP11.76□□□□□ -0.53
BDNF-218ENST00000533246 CBSLP0DN79 551 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 DDCP20711 480 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 MATN1P21941 496 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 HTR1EP28566 365 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 CBSP35520 551 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 TBPL1P62380 186 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 RPP38P78345 283 aaKnown RBP11.76□□□□□ -0.53
BDNF-218ENST00000533246 BCL2A1Q16548 175 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 TSTQ16762 297 aaKnown RBP11.76□□□□□ -0.53
BDNF-218ENST00000533246 TRIM71Q2Q1W2 868 aaKnown RBP11.76□□□□□ -0.53
BDNF-218ENST00000533246 ZNF551Q7Z340 670 aaPredicted RBP11.76□□□□□ -0.53
BDNF-218ENST00000533246 OLIG1Q8TAK6 271 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 GRHL3Q8TE85 626 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 CIDECQ96AQ7 238 aaPredicted RBP11.76□□□□□ -0.53
BDNF-218ENST00000533246 IFT27Q9BW83 186 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 FZD3Q9NPG1 666 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 CLDND1Q9NY35 253 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 GPRC5BQ9NZH0 403 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 PTBP2Q9UKA9 531 aaKnown RBP11.76□□□□□ -0.53
BDNF-218ENST00000533246 OR1A2Q9Y585 309 aa11.76□□□□□ -0.53
BDNF-218ENST00000533246 SLC25A12O75746 678 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 TFPIP10646 304 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 MAGEA3P43357 314 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 IDO2Q6ZQW0 420 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 METTL25Q8N6Q8 603 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 FBXO15Q8NCQ5 510 aaPredicted RBP11.75□□□□□ -0.53
BDNF-218ENST00000533246 PIGXQ8TBF5 258 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 NT5C3BQ969T7 300 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 TCEAL4Q96EI5 215 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms