RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 NIPAL2Q9H841 368 aa14.16□□□□□ -0.14
CAPN1-224ENST00000533129 SH3BP4Q9P0V3 963 aa14.16□□□□□ -0.14
CAPN1-224ENST00000533129 SATB2Q9UPW6 733 aa14.16□□□□□ -0.14
CAPN1-224ENST00000533129 GLYATL1P3A0A0U1RQE8 302 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 A0A0X1KG70 313 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 A0A1W2PQ67 120 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 ZNF840PA6NDX5 716 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 OR6C70A6NIJ9 312 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 PCDH7O60245 1069 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 PRAMEF4O60810 478 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 CPNE3O75131 537 aaKnown RBP14.15□□□□□ -0.14
CAPN1-224ENST00000533129 CSO75390 466 aaKnown RBP14.15□□□□□ -0.14
CAPN1-224ENST00000533129 OPN1SWP03999 348 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 CYP17A1P05093 508 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 CPN2P22792 545 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 NUDT1P36639 197 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 OR1E2P47887 323 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 CRISP1P54107 249 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 QPRTQ15274 297 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 SPHARQ15513 63 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 PTCHD3Q3KNS1 767 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 PDZK1Q5T2W1 519 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 HECTD3Q5T447 861 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 CPTPQ5TA50 214 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 PRAMEF9Q5VWM5 478 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 CAMKMTQ7Z624 323 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 ADGRG2Q8IZP9 1017 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 CDC26Q8NHZ8 85 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 UBASH3BQ8TF42 649 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 GTPBP3Q969Y2 492 aaKnown RBP14.15□□□□□ -0.14
CAPN1-224ENST00000533129 PIP5K1AQ99755 562 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 BEX2Q9BXY8 128 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 MCOLN1Q9GZU1 580 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 MKRN2Q9H000 416 aaKnown RBP14.15□□□□□ -0.14
CAPN1-224ENST00000533129 ACER3Q9NUN7 267 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 TRPM5Q9NZQ8 1165 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 VPS29Q9UBQ0 182 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 ZNF282Q9UDV7 671 aaPredicted RBP14.15□□□□□ -0.14
CAPN1-224ENST00000533129 PRAMEF25A6NGN4 478 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.15□□□□□ -0.14
CAPN1-224ENST00000533129 C8GP07360 202 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 CNR2P34972 360 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 OR3A3P47888 321 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 GZMKP49863 264 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 SGSHP51688 502 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 TAF12Q16514 161 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 WDR45BQ5MNZ6 344 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 ZNF648Q5T619 568 aaPredicted RBP14.15□□□□□ -0.14
CAPN1-224ENST00000533129 CCDC28AQ8IWP9 274 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 TCEAL8Q8IYN2 117 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 NXPE1Q8N323 547 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 CLDN22Q8N7P3 220 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 TRMT61AQ96FX7 289 aaKnown RBP14.15□□□□□ -0.14
CAPN1-224ENST00000533129 METTL2AQ96IZ6 378 aaKnown RBP14.15□□□□□ -0.14
CAPN1-224ENST00000533129 MND1Q9BWT6 205 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 MIXL1Q9H2W2 232 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 ABCB9Q9NP78 766 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 DNAJC11Q9NVH1 559 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 TOR4AQ9NXH8 423 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 SSR3Q9UNL2 185 aa14.15□□□□□ -0.14
CAPN1-224ENST00000533129 LOC105371267A0A1B0GV96 52 aa14.14□□□□□ -0.15
CAPN1-224ENST00000533129 PRRG1O14668 218 aa14.14□□□□□ -0.15
CAPN1-224ENST00000533129 PCDH17O14917 1159 aa14.14□□□□□ -0.15
CAPN1-224ENST00000533129 GJB5O95377 273 aa14.14□□□□□ -0.15
CAPN1-224ENST00000533129 IL1AP01583 271 aa14.14□□□□□ -0.15
CAPN1-224ENST00000533129 FGBP02675 491 aa14.14□□□□□ -0.15
CAPN1-224ENST00000533129 POU2F1P14859 743 aa14.14□□□□□ -0.15
CAPN1-224ENST00000533129 CA8P35219 290 aa14.14□□□□□ -0.15
CAPN1-224ENST00000533129 KIR2DL3P43628 341 aa14.14□□□□□ -0.15
CAPN1-224ENST00000533129 XCR1P46094 333 aa14.14□□□□□ -0.15
CAPN1-224ENST00000533129 HTRA4P83105 476 aaPredicted RBP14.14□□□□□ -0.15
CAPN1-224ENST00000533129 TARDBPQ13148 414 aaKnown RBP eCLIP14.14□□□□□ -0.15
CAPN1-224ENST00000533129 SAXO2Q658L1 398 aa14.14□□□□□ -0.15
CAPN1-224ENST00000533129 FRMPD2BQ6IN97 320 aa14.14□□□□□ -0.15
CAPN1-224ENST00000533129 KLHL17Q6TDP4 642 aa14.14□□□□□ -0.15
CAPN1-224ENST00000533129 ZNF767PQ75MW2 155 aa14.14□□□□□ -0.15
CAPN1-224ENST00000533129 LAS2Q8IYD9 372 aa14.14□□□□□ -0.15
CAPN1-224ENST00000533129 RNF175Q8N4F7 328 aa14.14□□□□□ -0.15
CAPN1-224ENST00000533129 ENKURQ8TC29 256 aa14.14□□□□□ -0.15
CAPN1-224ENST00000533129 CREB3L4Q8TEY5 395 aa14.14□□□□□ -0.15
CAPN1-224ENST00000533129 GEMIN6Q8WXD5 167 aaKnown RBP14.14□□□□□ -0.15
CAPN1-224ENST00000533129 KLHL6Q8WZ60 621 aa14.14□□□□□ -0.15
CAPN1-224ENST00000533129 VPS35Q96QK1 796 aa14.14□□□□□ -0.15
CAPN1-224ENST00000533129 TCF25Q9BQ70 676 aa14.14□□□□□ -0.15
CAPN1-224ENST00000533129 FAM83DQ9H4H8 585 aa14.14□□□□□ -0.15
CAPN1-224ENST00000533129 PRKAG2Q9UGJ0 569 aa14.14□□□□□ -0.15
CAPN1-224ENST00000533129 FABP12A6NFH5 140 aa14.14□□□□□ -0.15
CAPN1-224ENST00000533129 UPK3BL1B0FP48 263 aa14.14□□□□□ -0.15
CAPN1-224ENST00000533129 UPK3BL2E5RIL1 263 aa14.14□□□□□ -0.15
CAPN1-224ENST00000533129 TPST2O60704 377 aa14.14□□□□□ -0.15
CAPN1-224ENST00000533129 C1QBP02746 253 aa14.14□□□□□ -0.15
CAPN1-224ENST00000533129 HIST1H2AGP0C0S8 130 aaPredicted RBP14.14□□□□□ -0.15
CAPN1-224ENST00000533129 M6PRP20645 277 aa14.14□□□□□ -0.15
CAPN1-224ENST00000533129 HIST1H2ADP20671 130 aa14.14□□□□□ -0.15
CAPN1-224ENST00000533129 IFNA8P32881 189 aa14.14□□□□□ -0.15
CAPN1-224ENST00000533129 ASMTP46597 345 aa14.14□□□□□ -0.15
CAPN1-224ENST00000533129 RHOAP61586 193 aa14.14□□□□□ -0.15
CAPN1-224ENST00000533129 SNRPGP62308 76 aaKnown RBP14.14□□□□□ -0.15
CAPN1-224ENST00000533129 RBBP4Q09028 425 aa14.14□□□□□ -0.15
CAPN1-224ENST00000533129 LRRC74AQ0VAA2 488 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms