RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 LIN52Q52LA3 116 aa14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 RBM48Q5RL73 367 aaKnown RBP14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 OR2L8Q8NGY9 312 aa14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 OR5P2Q8WZ92 322 aa14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 LRCH3Q96II8 777 aa14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 SNTG1Q9NSN8 517 aa14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 ZDHHC7Q9NXF8 308 aa14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 PCDH10Q9P2E7 1040 aa14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 PFDN2Q9UHV9 154 aa14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 UQCRC2P22695 453 aa14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 SLC15A1P46059 708 aa14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 KCNC4Q03721 635 aa14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 CBLBQ13191 982 aa14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 TIGD6Q17RP2 521 aa14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 SPANXN4Q5MJ08 99 aa14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 ZC3H14Q6PJT7 736 aaKnown RBP14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 RNF130Q86XS8 419 aa14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 CRYGNQ8WXF5 182 aa14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 EBF2Q9HAK2 575 aa14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 CD207Q9UJ71 328 aa14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 DNMT3AQ9Y6K1 912 aaPredicted RBP14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 COL16A1Q07092 1604 aaPredicted RBP14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 OR14I1A6ND48 311 aa14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 BLOC1S5-TXNDC5H3BN57 136 aa14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 OR2B3O76000 313 aa14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 RPS15AP62244 130 aaKnown RBP14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 ARSJQ5FYB0 599 aaPredicted RBP14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 PIGWQ7Z7B1 504 aa14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 PHTF2Q8N3S3 785 aa14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 HTRA1Q92743 480 aa14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 EZH1Q92800 747 aaPredicted RBP14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 IL4I1Q96RQ9 567 aa14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 CLDN25C9JDP6 229 aa14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 CCNKO75909 580 aa14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 HBQ1P09105 142 aa14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 IFI30P13284 250 aa14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 NOVP48745 357 aa14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 GXYLT1Q4G148 440 aa14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 FLYWCH1Q4VC44 716 aa14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 FRMD7Q6ZUT3 714 aa14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 CCDC116Q8IYX3 515 aa14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 MYLIPQ8WY64 445 aa14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 TMEM184CQ9NVA4 438 aa14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 GOLGA4Q13439 2230 aaKnown RBP14.21□□□□□ -0.13
PCDHA9-202ENST00000532602 E7EQ34 232 aa14.21□□□□□ -0.13
PCDHA9-202ENST00000532602 RFXAPO00287 272 aa14.21□□□□□ -0.13
PCDHA9-202ENST00000532602 KDM4BO94953 1096 aa14.21□□□□□ -0.13
PCDHA9-202ENST00000532602 INMTO95050 263 aa14.21□□□□□ -0.13
PCDHA9-202ENST00000532602 CH25HO95992 272 aa14.21□□□□□ -0.13
PCDHA9-202ENST00000532602 TMEM225Q6GV28 225 aa14.21□□□□□ -0.13
PCDHA9-202ENST00000532602 PYURFQ96I23 114 aa14.21□□□□□ -0.13
PCDHA9-202ENST00000532602 HERPUD2Q9BSE4 406 aa14.21□□□□□ -0.13
PCDHA9-202ENST00000532602 BOCQ9BWV1 1114 aa14.21□□□□□ -0.13
PCDHA9-202ENST00000532602 TSSK6Q9BXA6 273 aa14.21□□□□□ -0.13
PCDHA9-202ENST00000532602 FBRSL1Q9HCM7 1045 aaKnown RBP14.21□□□□□ -0.13
PCDHA9-202ENST00000532602 ACTR3BQ9P1U1 418 aa14.21□□□□□ -0.13
PCDHA9-202ENST00000532602 LIPT1Q9Y234 373 aa14.21□□□□□ -0.13
PCDHA9-202ENST00000532602 PCDHB14Q9Y5E9 798 aa14.21□□□□□ -0.13
PCDHA9-202ENST00000532602 TAS2R43P59537 309 aa14.21□□□□□ -0.13
PCDHA9-202ENST00000532602 SLC18A2Q05940 514 aa14.21□□□□□ -0.13
PCDHA9-202ENST00000532602 ZFP69Q49AA0 526 aa14.21□□□□□ -0.13
PCDHA9-202ENST00000532602 PLCZ1Q86YW0 608 aa14.21□□□□□ -0.13
PCDHA9-202ENST00000532602 KRTCAP2Q8N6L1 136 aa14.21□□□□□ -0.13
PCDHA9-202ENST00000532602 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.21□□□□□ -0.13
PCDHA9-202ENST00000532602 TSPEARQ8WU66 669 aa14.21□□□□□ -0.13
PCDHA9-202ENST00000532602 ZNF778Q96MU6 729 aa14.21□□□□□ -0.13
PCDHA9-202ENST00000532602 ALPK1Q96QP1 1244 aa14.21□□□□□ -0.13
PCDHA9-202ENST00000532602 MCHR1Q99705 422 aa14.21□□□□□ -0.13
PCDHA9-202ENST00000532602 TTLL8A6PVC2 850 aa14.21□□□□□ -0.13
PCDHA9-202ENST00000532602 CDH11P55287 796 aa14.21□□□□□ -0.13
PCDHA9-202ENST00000532602 NNATQ16517 81 aa14.21□□□□□ -0.13
PCDHA9-202ENST00000532602 UNQ6126/PRO20091Q6UXV3 157 aa14.21□□□□□ -0.13
PCDHA9-202ENST00000532602 GALNT10Q86SR1 603 aa14.21□□□□□ -0.13
PCDHA9-202ENST00000532602 SLC22A8Q8TCC7 542 aa14.21□□□□□ -0.13
PCDHA9-202ENST00000532602 THEM6Q8WUY1 208 aa14.21□□□□□ -0.13
PCDHA9-202ENST00000532602 OSTF1Q92882 214 aa14.21□□□□□ -0.13
PCDHA9-202ENST00000532602 RAB8BQ92930 207 aa14.21□□□□□ -0.13
PCDHA9-202ENST00000532602 ORAI3Q9BRQ5 295 aa14.21□□□□□ -0.13
PCDHA9-202ENST00000532602 TTYH1Q9H313 450 aaPredicted RBP14.21□□□□□ -0.13
PCDHA9-202ENST00000532602 MBLAC1A4D2B0 266 aaPredicted RBP14.21□□□□□ -0.14
PCDHA9-202ENST00000532602 HTR3EA5X5Y0 456 aa14.21□□□□□ -0.14
PCDHA9-202ENST00000532602 ZNF878C9JN71 531 aa14.21□□□□□ -0.14
PCDHA9-202ENST00000532602 HLA-DPB1P04440 258 aa14.21□□□□□ -0.14
PCDHA9-202ENST00000532602 ITGA5P08648 1049 aa14.21□□□□□ -0.14
PCDHA9-202ENST00000532602 HK1P19367 917 aa14.21□□□□□ -0.14
PCDHA9-202ENST00000532602 OR4D2P58180 307 aa14.21□□□□□ -0.14
PCDHA9-202ENST00000532602 ZNF252P-AS1Q0IIN9 211 aa14.21□□□□□ -0.14
PCDHA9-202ENST00000532602 LRRC26Q2I0M4 334 aa14.21□□□□□ -0.14
PCDHA9-202ENST00000532602 RNF111Q6ZNA4 994 aa14.21□□□□□ -0.14
PCDHA9-202ENST00000532602 JAGN1Q8N5M9 183 aa14.21□□□□□ -0.14
PCDHA9-202ENST00000532602 NAXEQ8NCW5 288 aa14.21□□□□□ -0.14
PCDHA9-202ENST00000532602 COMMD3Q9UBI1 195 aa14.21□□□□□ -0.14
PCDHA9-202ENST00000532602 PDLIM1O00151 329 aa14.2□□□□□ -0.14
PCDHA9-202ENST00000532602 ENTPD6O75354 484 aa14.2□□□□□ -0.14
PCDHA9-202ENST00000532602 CREG1O75629 220 aa14.2□□□□□ -0.14
PCDHA9-202ENST00000532602 SEMA4FO95754 770 aa14.2□□□□□ -0.14
PCDHA9-202ENST00000532602 LEPRP48357 1165 aaKnown RBP14.2□□□□□ -0.14
PCDHA9-202ENST00000532602 SOX9P48436 509 aa14.2□□□□□ -0.14
PCDHA9-202ENST00000532602 NFE2L1Q14494 772 aa14.2□□□□□ -0.14
PCDHA9-202ENST00000532602 ARL9Q6T311 187 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms