RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 PIK3R1P27986 724 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 SERPINB3P29508 390 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 NTSP30990 170 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 HNRNPH1P31943 449 aaKnown RBP7.5□□□□□ -1.21
SSBP3-211ENST00000528787 MPIP34949 423 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 BSGP35613 385 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 STAT5AP42229 794 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 XCR1P46094 333 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 ATP4BP51164 291 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 FOXA1P55317 472 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 YBX1P67809 324 aaKnown RBP7.5□□□□□ -1.21
SSBP3-211ENST00000528787 HMGCS1Q01581 520 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 TNFRSF17Q02223 184 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 SRSF11Q05519 484 aaKnown RBP7.5□□□□□ -1.21
SSBP3-211ENST00000528787 TBL3Q12788 808 aaKnown RBP7.5□□□□□ -1.21
SSBP3-211ENST00000528787 STX4Q12846 297 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 HYAL2Q12891 473 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 SLC13A2Q13183 592 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 CAMK2BQ13554 666 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 SSPNQ14714 243 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 NCF4Q15080 339 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 C6orf136Q5SQH8 315 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 MFSD4BQ5TF39 518 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 ANXA8L1Q5VT79 327 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 BHLHB9Q6PI77 547 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 QSOX2Q6ZRP7 698 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 LARP4Q71RC2 724 aaKnown RBP eCLIP7.5□□□□□ -1.21
SSBP3-211ENST00000528787 SPATA21Q7Z572 469 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 VN1R5Q7Z5H4 357 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 MIER2Q8N344 545 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 EFCAB3Q8N7B9 438 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 GALNT6Q8NCL4 622 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 OR9A4Q8NGU2 314 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 OR2Y1Q8NGV0 311 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 OR51Q1Q8NH59 317 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 DNAJB8Q8NHS0 232 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 SNIP1Q8TAD8 396 aaKnown RBP7.5□□□□□ -1.21
SSBP3-211ENST00000528787 TSPEARQ8WU66 669 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 KCNE4Q8WWG9 221 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 ERP27Q96DN0 273 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 RBM18Q96H35 190 aaKnown RBP7.5□□□□□ -1.21
SSBP3-211ENST00000528787 PRR11Q96HE9 360 aaPredicted RBP7.5□□□□□ -1.21
SSBP3-211ENST00000528787 ZNF317Q96PQ6 595 aaPredicted RBP7.5□□□□□ -1.21
SSBP3-211ENST00000528787 MRPL1Q9BYD6 325 aaKnown RBP7.5□□□□□ -1.21
SSBP3-211ENST00000528787 RPF2Q9H7B2 306 aaKnown RBP7.5□□□□□ -1.21
SSBP3-211ENST00000528787 GPN2Q9H9Y4 310 aaPredicted RBP7.5□□□□□ -1.21
SSBP3-211ENST00000528787 APMAPQ9HDC9 416 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 NPHS2Q9NP85 383 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 SLCO1B3Q9NPD5 702 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 ASCL3Q9NQ33 180 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 FARSBQ9NSD9 589 aaKnown RBP7.5□□□□□ -1.21
SSBP3-211ENST00000528787 STARD5Q9NSY2 213 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 FGFR1OP2Q9NVK5 253 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 DHCR7Q9UBM7 475 aaKnown RBP7.5□□□□□ -1.21
SSBP3-211ENST00000528787 MARCOQ9UEW3 520 aaPredicted RBP7.5□□□□□ -1.21
SSBP3-211ENST00000528787 PCDHGB4Q9UN71 923 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 ENTPD4Q9Y227 616 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 FARSAQ9Y285 508 aaKnown RBP7.5□□□□□ -1.21
SSBP3-211ENST00000528787 CROCCQ5TZA2 2017 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 SCN3AQ9NY46 2000 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 DMXL1Q9Y485 3027 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 NUP210LQ5VU65 1888 aa7.49□□□□□ -1.21
SSBP3-211ENST00000528787 VSTM2BA6NLU5 285 aa7.49□□□□□ -1.21
SSBP3-211ENST00000528787 SGK494L7N484 410 aa7.49□□□□□ -1.21
SSBP3-211ENST00000528787 CDK2AP1O14519 115 aa7.49□□□□□ -1.21
SSBP3-211ENST00000528787 PROM1O43490 865 aa7.49□□□□□ -1.21
SSBP3-211ENST00000528787 CHST10O43529 356 aa7.49□□□□□ -1.21
SSBP3-211ENST00000528787 FOXS1O43638 330 aa7.49□□□□□ -1.21
SSBP3-211ENST00000528787 SHOX2O60902 331 aaPredicted RBP7.49□□□□□ -1.21
SSBP3-211ENST00000528787 CTNSO60931 367 aa7.49□□□□□ -1.21
SSBP3-211ENST00000528787 RDH16O75452 317 aa7.49□□□□□ -1.21
SSBP3-211ENST00000528787 IL6P05231 212 aa7.49□□□□□ -1.21
SSBP3-211ENST00000528787 IFI6P09912 130 aa7.49□□□□□ -1.21
SSBP3-211ENST00000528787 ZGLP1P0C6A0 271 aa7.49□□□□□ -1.21
SSBP3-211ENST00000528787 PRR35P0CG20 571 aa7.49□□□□□ -1.21
SSBP3-211ENST00000528787 CSNK2A2P19784 350 aaPredicted RBP7.49□□□□□ -1.21
SSBP3-211ENST00000528787 DDCP20711 480 aa7.49□□□□□ -1.21
SSBP3-211ENST00000528787 PTPN4P29074 926 aa7.49□□□□□ -1.21
SSBP3-211ENST00000528787 GALNSP34059 522 aa7.49□□□□□ -1.21
SSBP3-211ENST00000528787 DLSTP36957 453 aa7.49□□□□□ -1.21
SSBP3-211ENST00000528787 CCR10P46092 362 aa7.49□□□□□ -1.21
SSBP3-211ENST00000528787 MRPL19P49406 292 aaKnown RBP7.49□□□□□ -1.21
SSBP3-211ENST00000528787 IDH3AP50213 366 aa7.49□□□□□ -1.21
SSBP3-211ENST00000528787 RRADP55042 308 aa7.49□□□□□ -1.21
SSBP3-211ENST00000528787 LIM2P55344 173 aa7.49□□□□□ -1.21
SSBP3-211ENST00000528787 CLDN8P56748 225 aa7.49□□□□□ -1.21
SSBP3-211ENST00000528787 C21orf58P58505 322 aa7.49□□□□□ -1.21
SSBP3-211ENST00000528787 TXNL4AP83876 142 aaKnown RBP7.49□□□□□ -1.21
SSBP3-211ENST00000528787 PLIN5Q00G26 463 aa7.49□□□□□ -1.21
SSBP3-211ENST00000528787 KLC1Q07866 573 aa7.49□□□□□ -1.21
SSBP3-211ENST00000528787 DNASE1L3Q13609 305 aa7.49□□□□□ -1.21
SSBP3-211ENST00000528787 SQLEQ14534 574 aa7.49□□□□□ -1.21
SSBP3-211ENST00000528787 TERF2Q15554 542 aa7.49□□□□□ -1.21
SSBP3-211ENST00000528787 LSM12Q3MHD2 195 aaKnown RBP7.49□□□□□ -1.21
SSBP3-211ENST00000528787 PDCD4Q53EL6 469 aaKnown RBP7.49□□□□□ -1.21
SSBP3-211ENST00000528787 NDUFAF5Q5TEU4 345 aa7.49□□□□□ -1.21
SSBP3-211ENST00000528787 IRAK1BP1Q5VVH5 260 aa7.49□□□□□ -1.21
SSBP3-211ENST00000528787 IL23RQ5VWK5 629 aa7.49□□□□□ -1.21
SSBP3-211ENST00000528787 MLIPQ5VWP3 458 aa7.49□□□□□ -1.21
SSBP3-211ENST00000528787 Q6ZSR9 355 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms