RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	LYRM4	Q9HD34	91 aa		11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	DMRT3	Q9NQL9	472 aa		11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	PRTFDC1	Q9NRG1	225 aa		11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	PCTP	Q9UKL6	214 aa		11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	TSC22D4	Q9Y3Q8	395 aa		11.01	□□□□□ -0.65
PSMC3-205	ENST00000528362	NUP210L	Q5VU65	1888 aa		11	□□□□□ -0.65
PSMC3-205	ENST00000528362		A8MUA0	341 aa		11	□□□□□ -0.65
PSMC3-205	ENST00000528362		H0YIV9	168 aa		11	□□□□□ -0.65
PSMC3-205	ENST00000528362	STX16-NPEPL1	H3BU86	382 aa		11	□□□□□ -0.65
PSMC3-205	ENST00000528362	CLDN4	O14493	209 aa		11	□□□□□ -0.65
PSMC3-205	ENST00000528362	OR7A17	O14581	309 aa		11	□□□□□ -0.65
PSMC3-205	ENST00000528362	STX16	O14662	325 aa		11	□□□□□ -0.65
PSMC3-205	ENST00000528362	UGDH	O60701	494 aa		11	□□□□□ -0.65
PSMC3-205	ENST00000528362	MYO1D	O94832	1006 aa		11	□□□□□ -0.65
PSMC3-205	ENST00000528362	HIST1H1T	P22492	207 aa	Predicted RBP	11	□□□□□ -0.65
PSMC3-205	ENST00000528362	PIK3CB	P42338	1070 aa		11	□□□□□ -0.65
PSMC3-205	ENST00000528362	PIK3CG	P48736	1102 aa		11	□□□□□ -0.65
PSMC3-205	ENST00000528362	ST13	P50502	369 aa	Known RBP	11	□□□□□ -0.65
PSMC3-205	ENST00000528362	HSD17B7	P56937	341 aa		11	□□□□□ -0.65
PSMC3-205	ENST00000528362	TAS2R50	P59544	299 aa		11	□□□□□ -0.65
PSMC3-205	ENST00000528362	TUBA3C	Q13748	450 aa		11	□□□□□ -0.65
PSMC3-205	ENST00000528362	SLC29A2	Q14542	456 aa		11	□□□□□ -0.65
PSMC3-205	ENST00000528362	CPSF6	Q16630	551 aa	Known RBP eCLIP	11	□□□□□ -0.65
PSMC3-205	ENST00000528362	EIF2S3L	Q2VIR3	472 aa	Known RBP	11	□□□□□ -0.65
PSMC3-205	ENST00000528362	DEPDC1	Q5TB30	811 aa		11	□□□□□ -0.65
PSMC3-205	ENST00000528362	TUBA3E	Q6PEY2	450 aa		11	□□□□□ -0.65
PSMC3-205	ENST00000528362	CHSY3	Q70JA7	882 aa		11	□□□□□ -0.65
PSMC3-205	ENST00000528362	CLNK	Q7Z7G1	428 aa		11	□□□□□ -0.65
PSMC3-205	ENST00000528362	ZNF595	Q8IYB9	648 aa		11	□□□□□ -0.65
PSMC3-205	ENST00000528362	APCDD1L	Q8NCL9	501 aa		11	□□□□□ -0.65
PSMC3-205	ENST00000528362	OR52B6	Q8NGF0	335 aa		11	□□□□□ -0.65
PSMC3-205	ENST00000528362	FAR1	Q8WVX9	515 aa		11	□□□□□ -0.65
PSMC3-205	ENST00000528362	CDK15	Q96Q40	435 aa		11	□□□□□ -0.65
PSMC3-205	ENST00000528362	TAAR6	Q96RI8	345 aa		11	□□□□□ -0.65
PSMC3-205	ENST00000528362	MTERF1	Q99551	399 aa	Known RBP	11	□□□□□ -0.65
PSMC3-205	ENST00000528362	MAPKAP1	Q9BPZ7	522 aa		11	□□□□□ -0.65
PSMC3-205	ENST00000528362	MRPL57	Q9BQC6	102 aa	Known RBP	11	□□□□□ -0.65
PSMC3-205	ENST00000528362	ROGDI	Q9GZN7	287 aa		11	□□□□□ -0.65
PSMC3-205	ENST00000528362	NOL11	Q9H8H0	719 aa	Known RBP	11	□□□□□ -0.65
PSMC3-205	ENST00000528362	ZBTB26	Q9HCK0	441 aa		11	□□□□□ -0.65
PSMC3-205	ENST00000528362	PRM3	Q9NNZ6	103 aa		11	□□□□□ -0.65
PSMC3-205	ENST00000528362	AGPAT4	Q9NRZ5	378 aa		11	□□□□□ -0.65
PSMC3-205	ENST00000528362	ADGRE2	Q9UHX3	823 aa		11	□□□□□ -0.65
PSMC3-205	ENST00000528362	TMCO1	Q9UM00	188 aa		11	□□□□□ -0.65
PSMC3-205	ENST00000528362	RNF11	Q9Y3C5	154 aa		11	□□□□□ -0.65
PSMC3-205	ENST00000528362	PCDHGA11	Q9Y5H2	935 aa		11	□□□□□ -0.65
PSMC3-205	ENST00000528362	CNTRL	Q7Z7A1	2325 aa		11	□□□□□ -0.65
PSMC3-205	ENST00000528362	ANKUB1	A6NFN9	424 aa		10.99	□□□□□ -0.65
PSMC3-205	ENST00000528362	GABRR3	A8MPY1	467 aa		10.99	□□□□□ -0.65
PSMC3-205	ENST00000528362		A8MT66	165 aa		10.99	□□□□□ -0.65
PSMC3-205	ENST00000528362	PLPP1	O14494	284 aa		10.99	□□□□□ -0.65
PSMC3-205	ENST00000528362	PRAMEF2	O60811	474 aa		10.99	□□□□□ -0.65
PSMC3-205	ENST00000528362	SMIM24	O75264	130 aa		10.99	□□□□□ -0.65
PSMC3-205	ENST00000528362	SEMA7A	O75326	666 aa		10.99	□□□□□ -0.65
PSMC3-205	ENST00000528362	RPS17	P08708	135 aa	Known RBP	10.99	□□□□□ -0.65
PSMC3-205	ENST00000528362	CD96	P40200	585 aa		10.99	□□□□□ -0.65
PSMC3-205	ENST00000528362	SSR2	P43308	183 aa		10.99	□□□□□ -0.65
PSMC3-205	ENST00000528362	RPS13	P62277	151 aa	Known RBP	10.99	□□□□□ -0.65
PSMC3-205	ENST00000528362	TRAF3	Q13114	568 aa		10.99	□□□□□ -0.65
PSMC3-205	ENST00000528362	SLC13A2	Q13183	592 aa		10.99	□□□□□ -0.65
PSMC3-205	ENST00000528362	RCN2	Q14257	317 aa		10.99	□□□□□ -0.65
PSMC3-205	ENST00000528362	TERF2	Q15554	542 aa		10.99	□□□□□ -0.65
PSMC3-205	ENST00000528362	ZRSR2	Q15696	482 aa	Known RBP	10.99	□□□□□ -0.65
PSMC3-205	ENST00000528362	INA	Q16352	499 aa		10.99	□□□□□ -0.65
PSMC3-205	ENST00000528362	MEP1A	Q16819	746 aa		10.99	□□□□□ -0.65
PSMC3-205	ENST00000528362	AP5B1	Q2VPB7	878 aa		10.99	□□□□□ -0.65
PSMC3-205	ENST00000528362	TEX35	Q5T0J7	233 aa		10.99	□□□□□ -0.65
PSMC3-205	ENST00000528362	FHL5	Q5TD97	284 aa		10.99	□□□□□ -0.65
PSMC3-205	ENST00000528362	ZNF324B	Q6AW86	544 aa	Predicted RBP	10.99	□□□□□ -0.65
PSMC3-205	ENST00000528362	OR4C11	Q6IEV9	310 aa		10.99	□□□□□ -0.65
PSMC3-205	ENST00000528362	FAM180A	Q6UWF9	173 aa		10.99	□□□□□ -0.65
PSMC3-205	ENST00000528362	RPS27L	Q71UM5	84 aa	Known RBP	10.99	□□□□□ -0.65
PSMC3-205	ENST00000528362	LGI4	Q8N135	537 aa		10.99	□□□□□ -0.65
PSMC3-205	ENST00000528362	BCORP1	Q8N888	145 aa		10.99	□□□□□ -0.65
PSMC3-205	ENST00000528362	EIF1AD	Q8N9N8	165 aa	Known RBP	10.99	□□□□□ -0.65
PSMC3-205	ENST00000528362	MDS2	Q8NDY4	140 aa		10.99	□□□□□ -0.65
PSMC3-205	ENST00000528362	WDR20	Q8TBZ3	569 aa		10.99	□□□□□ -0.65
PSMC3-205	ENST00000528362	MTBP	Q96DY7	904 aa		10.99	□□□□□ -0.65
PSMC3-205	ENST00000528362	SIGLEC12	Q96PQ1	595 aa		10.99	□□□□□ -0.65
PSMC3-205	ENST00000528362	SLX1A	Q9BQ83	275 aa		10.99	□□□□□ -0.65
PSMC3-205	ENST00000528362	ZNF717	Q9BY31	904 aa	Predicted RBP	10.99	□□□□□ -0.65
PSMC3-205	ENST00000528362	PNO1	Q9NRX1	252 aa	Known RBP	10.99	□□□□□ -0.65
PSMC3-205	ENST00000528362	ANKRD10	Q9NXR5	420 aa		10.99	□□□□□ -0.65
PSMC3-205	ENST00000528362	FETUB	Q9UGM5	382 aa		10.99	□□□□□ -0.65
PSMC3-205	ENST00000528362	ZNF223	Q9UK11	482 aa	Predicted RBP	10.99	□□□□□ -0.65
PSMC3-205	ENST00000528362	PPIE	Q9UNP9	301 aa	Known RBP	10.99	□□□□□ -0.65
PSMC3-205	ENST00000528362	MRPS33	Q9Y291	106 aa	Known RBP	10.99	□□□□□ -0.65
PSMC3-205	ENST00000528362	SHANK1	Q9Y566	2161 aa		10.99	□□□□□ -0.65
PSMC3-205	ENST00000528362	TRBV11-1	A0A0K0K1C0	115 aa		10.98	□□□□□ -0.65
PSMC3-205	ENST00000528362		A0A1B0GTL3	188 aa		10.98	□□□□□ -0.65
PSMC3-205	ENST00000528362	MYOCOS	A0A1B0GUC4	107 aa		10.98	□□□□□ -0.65
PSMC3-205	ENST00000528362	CTNS	O60931	367 aa		10.98	□□□□□ -0.65
PSMC3-205	ENST00000528362	AGFG2	O95081	481 aa		10.98	□□□□□ -0.65
PSMC3-205	ENST00000528362	CLDN9	O95484	217 aa		10.98	□□□□□ -0.65
PSMC3-205	ENST00000528362	ETHE1	O95571	254 aa		10.98	□□□□□ -0.65
PSMC3-205	ENST00000528362	RNF224	P0DH78	156 aa		10.98	□□□□□ -0.65
PSMC3-205	ENST00000528362	GPR143	P51810	404 aa		10.98	□□□□□ -0.65
PSMC3-205	ENST00000528362	NEK2	P51955	445 aa		10.98	□□□□□ -0.65
PSMC3-205	ENST00000528362	RAP1GDS1	P52306	607 aa		10.98	□□□□□ -0.65
PSMC3-205	ENST00000528362	OR1C1	Q15619	314 aa		10.98	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms