RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 PGAM1P18669 254 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 CYP2B6P20813 491 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 AZGP1P25311 298 aaKnown RBP5.58□□□□□ -1.52
CD44-225ENST00000527326 ICAM3P32942 547 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 RPS19P39019 145 aaKnown RBP5.58□□□□□ -1.52
CD44-225ENST00000527326 PIK3CGP48736 1102 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 HSPA7P48741 367 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 INPP1P49441 399 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 XKP51811 444 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 NUDT6P53370 316 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 ACLYP53396 1101 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 RAB2AP61019 212 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 RPS7P62081 194 aaKnown RBP5.58□□□□□ -1.52
CD44-225ENST00000527326 RPP30P78346 268 aaKnown RBP5.58□□□□□ -1.52
CD44-225ENST00000527326 HOXC5Q00444 222 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 DEFA5Q01523 94 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 MC2RQ01718 297 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 POU4F1Q01851 419 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 DHODHQ02127 395 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 RPL6Q02878 288 aaKnown RBP5.58□□□□□ -1.52
CD44-225ENST00000527326 GLO1Q04760 184 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 LIPEQ05469 1076 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 SERINC3Q13530 473 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 NFYCQ13952 458 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 OPCMLQ14982 345 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 MAD2L1BPQ15013 274 aaPredicted RBP5.58□□□□□ -1.52
CD44-225ENST00000527326 FCN2Q15485 313 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 TARBP2Q15633 366 aaKnown RBP5.58□□□□□ -1.52
CD44-225ENST00000527326 KYAT1Q16773 422 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 SYT16Q17RD7 645 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 HSDL1Q3SXM5 330 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 PYDC2Q56P42 97 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 OR5M10Q6IEU7 315 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 TRMT10BQ6PF06 316 aaKnown RBP5.58□□□□□ -1.52
CD44-225ENST00000527326 ZNF790Q6PG37 636 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 C19orf48Q6RUI8 117 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 ATRAIDQ6UW56 229 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 UQCC3Q6UW78 93 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 VITQ6UXI7 678 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 HSDL2Q6YN16 418 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 PIWIL4Q7Z3Z4 852 aaKnown RBP5.58□□□□□ -1.52
CD44-225ENST00000527326 TRMT11Q7Z4G4 463 aaKnown RBP5.58□□□□□ -1.52
CD44-225ENST00000527326 SERINC5Q86VE9 423 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 FJX1Q86VR8 437 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 RFX6Q8HWS3 928 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 KRTAP1-3Q8IUG1 177 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 ENTHD1Q8IYW4 607 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 SVBPQ8N300 66 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 PRR18Q8N4B5 295 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 SPATA6LQ8N4H0 392 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 ZNF655Q8N720 491 aaPredicted RBP5.58□□□□□ -1.52
CD44-225ENST00000527326 POMGNT2Q8NAT1 580 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 NLGN2Q8NFZ4 835 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 OR2T11Q8NH01 316 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 SPATA22Q8NHS9 363 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.58□□□□□ -1.52
CD44-225ENST00000527326 WDR20Q8TBZ3 569 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 AGR3Q8TD06 166 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 KAT2AQ92830 837 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 HAS1Q92839 578 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 UPRTQ96BW1 309 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 LRRC58Q96CX6 371 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 TCEAL4Q96EI5 215 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 C14orf144Q96I85 54 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 SENP8Q96LD8 212 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 CXorf58Q96LI9 332 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 PPP1R36Q96LQ0 422 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 C3orf30Q96M34 536 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 LRFN5Q96NI6 719 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 COL21A1Q96P44 957 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 VAT1Q99536 393 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 SEPHS2Q99611 448 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 EDEM2Q9BV94 578 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 SORBS1Q9BX66 1292 aaKnown RBP5.58□□□□□ -1.52
CD44-225ENST00000527326 MRPL4Q9BYD3 311 aaKnown RBP5.58□□□□□ -1.52
CD44-225ENST00000527326 ACE2Q9BYF1 805 aaPredicted RBP5.58□□□□□ -1.52
CD44-225ENST00000527326 B3GNT5Q9BYG0 378 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 SEMA4CQ9C0C4 833 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 OR51V1Q9H2C8 321 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 TMPRSS5Q9H3S3 457 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 MVB12BQ9H7P6 319 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 EVA1AQ9H8M9 152 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 SMURF2Q9HAU4 748 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 FAM86C1Q9NVL1 165 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 TMEM45AQ9NWC5 275 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 MPP6Q9NZW5 540 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 RCOR3Q9P2K3 495 aaPredicted RBP5.58□□□□□ -1.52
CD44-225ENST00000527326 AASSQ9UDR5 926 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 SEC14L3Q9UDX4 400 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 ZNF222Q9UK12 451 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 BTRCQ9Y297 605 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 CA5BQ9Y2D0 317 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 COQ4Q9Y3A0 265 aa5.58□□□□□ -1.52
CD44-225ENST00000527326 MAGED1Q9Y5V3 778 aaPredicted RBP5.58□□□□□ -1.52
CD44-225ENST00000527326 UBR2Q8IWV8 1755 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 MEIKINA0A087WXM9 373 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 A0A096LPK6 155 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 A0A0J9YYE9 177 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 LOC100289279A0A1B0GTE1 492 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 POM121BA6NF01 834 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms