RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 CHSY3Q70JA7 882 aa17.35■□□□□ 0.37
CAPN1-203ENST00000525013 RELL1Q8IUW5 271 aa17.35■□□□□ 0.37
CAPN1-203ENST00000525013 ZNF595Q8IYB9 648 aa17.35■□□□□ 0.37
CAPN1-203ENST00000525013 MDS2Q8NDY4 140 aa17.35■□□□□ 0.37
CAPN1-203ENST00000525013 B3GNT7Q8NFL0 401 aa17.35■□□□□ 0.37
CAPN1-203ENST00000525013 OR7G3Q8NG95 312 aa17.35■□□□□ 0.37
CAPN1-203ENST00000525013 ZNF473Q8WTR7 871 aaKnown RBP17.35■□□□□ 0.37
CAPN1-203ENST00000525013 THAP3Q8WTV1 239 aaPredicted RBP17.35■□□□□ 0.37
CAPN1-203ENST00000525013 CSF3RQ99062 836 aa17.35■□□□□ 0.37
CAPN1-203ENST00000525013 ROGDIQ9GZN7 287 aa17.35■□□□□ 0.37
CAPN1-203ENST00000525013 LRFN1Q9P244 771 aa17.35■□□□□ 0.37
CAPN1-203ENST00000525013 CPSF2Q9P2I0 782 aaKnown RBP17.35■□□□□ 0.37
CAPN1-203ENST00000525013 DAPP1Q9UN19 280 aa17.35■□□□□ 0.37
CAPN1-203ENST00000525013 GTF3C1Q12789 2109 aa17.35■□□□□ 0.37
CAPN1-203ENST00000525013 UNC79Q9P2D8 2635 aa17.34■□□□□ 0.37
CAPN1-203ENST00000525013 TRBV11-1A0A0K0K1C0 115 aa17.34■□□□□ 0.37
CAPN1-203ENST00000525013 CCDC189A1A4V9 331 aa17.34■□□□□ 0.37
CAPN1-203ENST00000525013 SAP18O00422 153 aaKnown RBP17.34■□□□□ 0.37
CAPN1-203ENST00000525013 RTCAO00442 366 aaKnown RBP17.34■□□□□ 0.37
CAPN1-203ENST00000525013 CYR61O00622 381 aa17.34■□□□□ 0.37
CAPN1-203ENST00000525013 UNC5CO95185 931 aa17.34■□□□□ 0.37
CAPN1-203ENST00000525013 IFNA16P05015 189 aa17.34■□□□□ 0.37
CAPN1-203ENST00000525013 TPP2P29144 1249 aaPredicted RBP17.34■□□□□ 0.37
CAPN1-203ENST00000525013 PPP2R1BP30154 601 aa17.34■□□□□ 0.37
CAPN1-203ENST00000525013 ALDH18A1P54886 795 aaKnown RBP17.34■□□□□ 0.37
CAPN1-203ENST00000525013 PER3P56645 1201 aa17.34■□□□□ 0.37
CAPN1-203ENST00000525013 MLF1P58340 268 aa17.34■□□□□ 0.37
CAPN1-203ENST00000525013 CACNA1DQ01668 2161 aa17.34■□□□□ 0.37
CAPN1-203ENST00000525013 SETDB1Q15047 1291 aa17.34■□□□□ 0.37
CAPN1-203ENST00000525013 AP5B1Q2VPB7 878 aa17.34■□□□□ 0.37
CAPN1-203ENST00000525013 TMEM35AQ53FP2 167 aa17.34■□□□□ 0.37
CAPN1-203ENST00000525013 GLE1Q53GS7 698 aaKnown RBP17.34■□□□□ 0.37
CAPN1-203ENST00000525013 TAOK1Q7L7X3 1001 aa17.34■□□□□ 0.37
CAPN1-203ENST00000525013 LAS2Q8IYD9 372 aa17.34■□□□□ 0.37
CAPN1-203ENST00000525013 TMEM178AQ8NBL3 297 aa17.34■□□□□ 0.37
CAPN1-203ENST00000525013 SLC44A1Q8WWI5 657 aa17.34■□□□□ 0.37
CAPN1-203ENST00000525013 TBCDQ9BTW9 1192 aa17.34■□□□□ 0.37
CAPN1-203ENST00000525013 ACTR8Q9H981 624 aa17.34■□□□□ 0.37
CAPN1-203ENST00000525013 SEC14L3Q9UDX4 400 aa17.34■□□□□ 0.37
CAPN1-203ENST00000525013 FBXW2Q9UKT8 454 aa17.34■□□□□ 0.37
CAPN1-203ENST00000525013 PCDHGB6Q9Y5F9 930 aa17.34■□□□□ 0.37
CAPN1-203ENST00000525013 MYOCOSA0A1B0GUC4 107 aa17.33■□□□□ 0.36
CAPN1-203ENST00000525013 LRRC14BA6NHZ5 514 aa17.33■□□□□ 0.36
CAPN1-203ENST00000525013 POC1B-GALNT4F8VUJ3 575 aa17.33■□□□□ 0.36
CAPN1-203ENST00000525013 TGFBR3LH3BV60 316 aa17.33■□□□□ 0.36
CAPN1-203ENST00000525013 KIF2AO00139 706 aaPredicted RBP17.33■□□□□ 0.36
CAPN1-203ENST00000525013 FCHO1O14526 889 aa17.33■□□□□ 0.36
CAPN1-203ENST00000525013 TUBB4AP04350 444 aa17.33■□□□□ 0.36
CAPN1-203ENST00000525013 ATP5A1P25705 553 aaKnown RBP17.33■□□□□ 0.36
CAPN1-203ENST00000525013 SERPINB1P30740 379 aa17.33■□□□□ 0.36
CAPN1-203ENST00000525013 SSR2P43308 183 aa17.33■□□□□ 0.36
CAPN1-203ENST00000525013 CYB561P49447 251 aa17.33■□□□□ 0.36
CAPN1-203ENST00000525013 CLCN2P51788 898 aa17.33■□□□□ 0.36
CAPN1-203ENST00000525013 E2F2Q14209 437 aa17.33■□□□□ 0.36
CAPN1-203ENST00000525013 TERF2Q15554 542 aa17.33■□□□□ 0.36
CAPN1-203ENST00000525013 MAPKAPK3Q16644 382 aa17.33■□□□□ 0.36
CAPN1-203ENST00000525013 ZNF468Q5VIY5 522 aaPredicted RBP17.33■□□□□ 0.36
CAPN1-203ENST00000525013 C1QL3Q5VWW1 255 aa17.33■□□□□ 0.36
CAPN1-203ENST00000525013 GRHL2Q6ISB3 625 aa17.33■□□□□ 0.36
CAPN1-203ENST00000525013 ZNF793Q6ZN11 406 aa17.33■□□□□ 0.36
CAPN1-203ENST00000525013 MAMDC2Q7Z304 686 aaPredicted RBP17.33■□□□□ 0.36
CAPN1-203ENST00000525013 UBE3DQ7Z6J8 389 aa17.33■□□□□ 0.36
CAPN1-203ENST00000525013 FJX1Q86VR8 437 aa17.33■□□□□ 0.36
CAPN1-203ENST00000525013 ACOT4Q8N9L9 421 aa17.33■□□□□ 0.36
CAPN1-203ENST00000525013 UHMK1Q8TAS1 419 aaKnown RBP17.33■□□□□ 0.36
CAPN1-203ENST00000525013 CMTM7Q96FZ5 175 aa17.33■□□□□ 0.36
CAPN1-203ENST00000525013 GPR78Q96P69 363 aa17.33■□□□□ 0.36
CAPN1-203ENST00000525013 PAFAH2Q99487 392 aa17.33■□□□□ 0.36
CAPN1-203ENST00000525013 MAPKAP1Q9BPZ7 522 aa17.33■□□□□ 0.36
CAPN1-203ENST00000525013 OR51B5Q9H339 312 aa17.33■□□□□ 0.36
CAPN1-203ENST00000525013 LYRM4Q9HD34 91 aa17.33■□□□□ 0.36
CAPN1-203ENST00000525013 ADAP2Q9NPF8 381 aa17.33■□□□□ 0.36
CAPN1-203ENST00000525013 SPACA6W5XKT8 324 aa17.33■□□□□ 0.36
CAPN1-203ENST00000525013 CROCCQ5TZA2 2017 aa17.32■□□□□ 0.36
CAPN1-203ENST00000525013 A0A1B0GUH1 482 aa17.32■□□□□ 0.36
CAPN1-203ENST00000525013 CTNSO60931 367 aa17.32■□□□□ 0.36
CAPN1-203ENST00000525013 SLC25A12O75746 678 aa17.32■□□□□ 0.36
CAPN1-203ENST00000525013 NEURL1O76050 574 aa17.32■□□□□ 0.36
CAPN1-203ENST00000525013 SP1P08047 785 aa17.32■□□□□ 0.36
CAPN1-203ENST00000525013 STSP08842 583 aa17.32■□□□□ 0.36
CAPN1-203ENST00000525013 HIST1H1TP22492 207 aaPredicted RBP17.32■□□□□ 0.36
CAPN1-203ENST00000525013 SERPINB9P50453 376 aa17.32■□□□□ 0.36
CAPN1-203ENST00000525013 RAP1GDS1P52306 607 aa17.32■□□□□ 0.36
CAPN1-203ENST00000525013 PCDH1Q08174 1060 aa17.32■□□□□ 0.36
CAPN1-203ENST00000525013 STX4Q12846 297 aa17.32■□□□□ 0.36
CAPN1-203ENST00000525013 GTF2H2Q13888 395 aa17.32■□□□□ 0.36
CAPN1-203ENST00000525013 NAA30Q147X3 362 aaPredicted RBP17.32■□□□□ 0.36
CAPN1-203ENST00000525013 KHDRBS2Q5VWX1 349 aaKnown RBP17.32■□□□□ 0.36
CAPN1-203ENST00000525013 SLC25A25Q6KCM7 469 aa17.32■□□□□ 0.36
CAPN1-203ENST00000525013 GTF2H2CQ6P1K8 395 aa17.32■□□□□ 0.36
CAPN1-203ENST00000525013 GALNTL5Q7Z4T8 443 aa17.32■□□□□ 0.36
CAPN1-203ENST00000525013 PLD6Q8N2A8 252 aaKnown RBP17.32■□□□□ 0.36
CAPN1-203ENST00000525013 RNF175Q8N4F7 328 aa17.32■□□□□ 0.36
CAPN1-203ENST00000525013 APCDD1LQ8NCL9 501 aa17.32■□□□□ 0.36
CAPN1-203ENST00000525013 HUS1BQ8NHY5 278 aa17.32■□□□□ 0.36
CAPN1-203ENST00000525013 KIF18AQ8NI77 898 aa17.32■□□□□ 0.36
CAPN1-203ENST00000525013 NCLNQ969V3 563 aa17.32■□□□□ 0.36
CAPN1-203ENST00000525013 VMP1Q96GC9 406 aa17.32■□□□□ 0.36
CAPN1-203ENST00000525013 SCMH1Q96GD3 660 aa17.32■□□□□ 0.36
CAPN1-203ENST00000525013 SCYL1Q96KG9 808 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms