RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 LMO7DNF2Z398 122 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 H7C423 109 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 CCER2I3L3R5 266 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 IFIT3O14879 490 aaKnown RBP1.46□□□□□ -2.18
CD44-212ENST00000524922 ANKRD28O15084 1053 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 ARHGEF9O43307 516 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 NUDT21O43809 227 aaKnown RBP1.46□□□□□ -2.18
CD44-212ENST00000524922 DPM1O60762 260 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 RNASEH1O60930 286 aaKnown RBP1.46□□□□□ -2.18
CD44-212ENST00000524922 SLITRK3O94933 977 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 CLDN1O95832 211 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 MT-ND3P03897 115 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 DNTTP04053 509 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 CSF2P04141 144 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 ATP5BP06576 529 aaKnown RBP1.46□□□□□ -2.18
CD44-212ENST00000524922 SRPRAP08240 638 aaKnown RBP1.46□□□□□ -2.18
CD44-212ENST00000524922 STSP08842 583 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 KRTAP1-4P0C5Y4 121 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 ANKRD34CP0C6C1 535 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 THEGLP0DJG4 465 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 SELLP14151 372 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 GOT1P17174 413 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 IFNAR1P17181 557 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 RPA1P27694 616 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 SUOXP51687 545 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 MFAP3P55082 362 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 CDH8P55286 799 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 IRX6P78412 446 aaPredicted RBP1.46□□□□□ -2.18
CD44-212ENST00000524922 PLIN5Q00G26 463 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 SULT2A1Q06520 285 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 ENPEPQ07075 957 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 FOXM1Q08050 763 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 DDX10Q13206 875 aaKnown RBP1.46□□□□□ -2.18
CD44-212ENST00000524922 KRT32Q14532 448 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 PDIA5Q14554 519 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 KIR2DS5Q14953 304 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 ZRSR2Q15696 482 aaKnown RBP1.46□□□□□ -2.18
CD44-212ENST00000524922 UGCGQ16739 394 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 ZNF630Q2M218 657 aaPredicted RBP1.46□□□□□ -2.18
CD44-212ENST00000524922 HNRNPA1L2Q32P51 320 aaKnown RBP1.46□□□□□ -2.18
CD44-212ENST00000524922 KIAA1644Q3SXP7 199 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 CDONQ4KMG0 1287 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 TCTEX1D4Q5JR98 221 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 C6orf141Q5SZD1 244 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 TTI2Q6NXR4 508 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 FAAP20Q6NZ36 180 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 RPUSD3Q6P087 351 aaKnown RBP1.46□□□□□ -2.18
CD44-212ENST00000524922 ZSCAN2Q7Z7L9 614 aaPredicted RBP1.46□□□□□ -2.18
CD44-212ENST00000524922 PARGQ86W56 976 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 C17orf82Q86X59 251 aaPredicted RBP1.46□□□□□ -2.18
CD44-212ENST00000524922 METTL23Q86XA0 190 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 FAM114A1Q8IWE2 563 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 EID3Q8N140 333 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 TTC39CQ8N584 583 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 ARL10Q8N8L6 244 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 AVL9Q8NBF6 648 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 ATAD1Q8NBU5 361 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 OR10T2Q8NGX3 314 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 MAPK15Q8TD08 544 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 RLN3Q8WXF3 142 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 KIAA1143Q96AT1 154 aaPredicted RBP1.46□□□□□ -2.18
CD44-212ENST00000524922 PHF21AQ96BD5 680 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 BIRC7Q96CA5 298 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 HVCN1Q96D96 273 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 ZNF414Q96IQ9 312 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 IFT74Q96LB3 600 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 ZMAT2Q96NC0 199 aaKnown RBP1.46□□□□□ -2.18
CD44-212ENST00000524922 IP6K3Q96PC2 410 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 SEC62Q99442 399 aaKnown RBP1.46□□□□□ -2.18
CD44-212ENST00000524922 CABLES2Q9BTV7 478 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 GPR174Q9BXC1 333 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 TRIM15Q9C019 465 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 CPVLQ9H3G5 476 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 FBXO44Q9H4M3 255 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 VAT1LQ9HCJ6 419 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 CSNK1G1Q9HCP0 422 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 PRR34Q9NV39 138 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 ELOVL2Q9NXB9 296 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 TBC1D7Q9P0N9 293 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 LSM7Q9UK45 103 aaKnown RBP1.46□□□□□ -2.18
CD44-212ENST00000524922 ITGA11Q9UKX5 1188 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 INTS6Q9UL03 887 aaKnown RBP1.46□□□□□ -2.18
CD44-212ENST00000524922 CDH9Q9ULB4 789 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 SATB2Q9UPW6 733 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 NAALADL1Q9UQQ1 740 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 NCKAP1Q9Y2A7 1128 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 TMEM184BQ9Y519 407 aaPredicted RBP1.46□□□□□ -2.18
CD44-212ENST00000524922 HES2Q9Y543 173 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 CPQQ9Y646 472 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 CYP46A1Q9Y6A2 500 aa1.46□□□□□ -2.18
CD44-212ENST00000524922 MYH9P35579 1960 aaKnown RBP1.46□□□□□ -2.18
CD44-212ENST00000524922 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.46□□□□□ -2.18
CD44-212ENST00000524922 MAP1AP78559 2803 aaPredicted RBP1.46□□□□□ -2.18
CD44-212ENST00000524922 PRRC2AP48634 2157 aaKnown RBP1.45□□□□□ -2.18
CD44-212ENST00000524922 ATP8B3O60423 1300 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 MN1Q10571 1320 aaPredicted RBP1.45□□□□□ -2.18
CD44-212ENST00000524922 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP1.45□□□□□ -2.18
CD44-212ENST00000524922 TEX13DA0A0J9YY54 714 aaPredicted RBP1.45□□□□□ -2.18
CD44-212ENST00000524922 SPTY2D1-AS1A0A0U1RR47 76 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 FRMD3A2A2Y4 597 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms