RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 CDH17Q12864 832 aa12.71□□□□□ -0.37
NKX3-1-202ENST00000523261 PWP1Q13610 501 aa12.71□□□□□ -0.37
NKX3-1-202ENST00000523261 ASTE1Q2TB18 679 aaPredicted RBP12.71□□□□□ -0.37
NKX3-1-202ENST00000523261 SYDE1Q6ZW31 735 aaPredicted RBP12.71□□□□□ -0.37
NKX3-1-202ENST00000523261 LINC00523Q86TU6 105 aa12.71□□□□□ -0.37
NKX3-1-202ENST00000523261 SCUBE1Q8IWY4 988 aa12.71□□□□□ -0.37
NKX3-1-202ENST00000523261 REXO1L1PQ8IX06 675 aa12.71□□□□□ -0.37
NKX3-1-202ENST00000523261 ZNF441Q8N8Z8 693 aa12.71□□□□□ -0.37
NKX3-1-202ENST00000523261 PPHLN1Q8NEY8 458 aaKnown RBP12.71□□□□□ -0.37
NKX3-1-202ENST00000523261 SFXN3Q9BWM7 321 aa12.71□□□□□ -0.37
NKX3-1-202ENST00000523261 RBSNQ9H1K0 784 aa12.71□□□□□ -0.37
NKX3-1-202ENST00000523261 CXorf56Q9H5V9 222 aa12.71□□□□□ -0.37
NKX3-1-202ENST00000523261 LRTM1Q9HBL6 345 aa12.71□□□□□ -0.37
NKX3-1-202ENST00000523261 PROK2Q9HC23 129 aa12.71□□□□□ -0.37
NKX3-1-202ENST00000523261 CCDC177Q9NQR7 707 aaPredicted RBP12.71□□□□□ -0.37
NKX3-1-202ENST00000523261 ZNF226Q9NYT6 803 aa12.71□□□□□ -0.37
NKX3-1-202ENST00000523261 CAPN11Q9UMQ6 739 aa12.71□□□□□ -0.37
NKX3-1-202ENST00000523261 CAMK2AQ9UQM7 478 aa12.71□□□□□ -0.37
NKX3-1-202ENST00000523261 WIF1Q9Y5W5 379 aa12.71□□□□□ -0.37
NKX3-1-202ENST00000523261 PKD1L1Q8TDX9 2849 aa12.71□□□□□ -0.37
NKX3-1-202ENST00000523261 NINQ8N4C6 2090 aa12.71□□□□□ -0.38
NKX3-1-202ENST00000523261 A8MXE2 369 aa12.7□□□□□ -0.38
NKX3-1-202ENST00000523261 PSMD3O43242 534 aa12.7□□□□□ -0.38
NKX3-1-202ENST00000523261 TMCC2O75069 709 aa12.7□□□□□ -0.38
NKX3-1-202ENST00000523261 AVILO75366 819 aa12.7□□□□□ -0.38
NKX3-1-202ENST00000523261 NDUFS3O75489 264 aa12.7□□□□□ -0.38
NKX3-1-202ENST00000523261 GRK3P35626 688 aa12.7□□□□□ -0.38
NKX3-1-202ENST00000523261 KCNJ2P63252 427 aa12.7□□□□□ -0.38
NKX3-1-202ENST00000523261 PRAMEF20Q5VT98 475 aa12.7□□□□□ -0.38
NKX3-1-202ENST00000523261 VASNQ6EMK4 673 aa12.7□□□□□ -0.38
NKX3-1-202ENST00000523261 SASS6Q6UVJ0 657 aa12.7□□□□□ -0.38
NKX3-1-202ENST00000523261 UTP15Q8TED0 518 aaKnown RBP12.7□□□□□ -0.38
NKX3-1-202ENST00000523261 GOLPH3Q9H4A6 298 aa12.7□□□□□ -0.38
NKX3-1-202ENST00000523261 ADAP2Q9NPF8 381 aa12.7□□□□□ -0.38
NKX3-1-202ENST00000523261 GTF3C3Q9Y5Q9 886 aa12.7□□□□□ -0.38
NKX3-1-202ENST00000523261 TENM1Q9UKZ4 2725 aa12.69□□□□□ -0.38
NKX3-1-202ENST00000523261 PJA2O43164 708 aa12.69□□□□□ -0.38
NKX3-1-202ENST00000523261 CDH1P12830 882 aa12.69□□□□□ -0.38
NKX3-1-202ENST00000523261 CHRM3P20309 590 aa12.69□□□□□ -0.38
NKX3-1-202ENST00000523261 FMO4P31512 558 aa12.69□□□□□ -0.38
NKX3-1-202ENST00000523261 P3H1Q32P28 736 aa12.69□□□□□ -0.38
NKX3-1-202ENST00000523261 ZNF791Q3KP31 576 aaPredicted RBP12.69□□□□□ -0.38
NKX3-1-202ENST00000523261 SLC22A10Q63ZE4 541 aa12.69□□□□□ -0.38
NKX3-1-202ENST00000523261 C17orf64Q86WR6 236 aa12.69□□□□□ -0.38
NKX3-1-202ENST00000523261 CA13Q8N1Q1 262 aa12.69□□□□□ -0.38
NKX3-1-202ENST00000523261 MPP5Q8N3R9 675 aa12.69□□□□□ -0.38
NKX3-1-202ENST00000523261 PAQR8Q8TEZ7 354 aa12.69□□□□□ -0.38
NKX3-1-202ENST00000523261 ASB11Q8WXH4 323 aa12.69□□□□□ -0.38
NKX3-1-202ENST00000523261 PEX13Q92968 403 aa12.69□□□□□ -0.38
NKX3-1-202ENST00000523261 WDYHV1Q96HA8 205 aa12.69□□□□□ -0.38
NKX3-1-202ENST00000523261 ANP32EQ9BTT0 268 aa12.69□□□□□ -0.38
NKX3-1-202ENST00000523261 PCBD2Q9H0N5 130 aa12.69□□□□□ -0.38
NKX3-1-202ENST00000523261 TCAF1Q9Y4C2 921 aa12.69□□□□□ -0.38
NKX3-1-202ENST00000523261 GFYI3L273 518 aa12.68□□□□□ -0.38
NKX3-1-202ENST00000523261 SNPHO15079 494 aa12.68□□□□□ -0.38
NKX3-1-202ENST00000523261 GAS8O95995 478 aa12.68□□□□□ -0.38
NKX3-1-202ENST00000523261 SERPIND1P05546 499 aa12.68□□□□□ -0.38
NKX3-1-202ENST00000523261 GDF1P27539 372 aa12.68□□□□□ -0.38
NKX3-1-202ENST00000523261 SOX18P35713 384 aa12.68□□□□□ -0.38
NKX3-1-202ENST00000523261 CPOXP36551 454 aa12.68□□□□□ -0.38
NKX3-1-202ENST00000523261 SLCO1A2P46721 670 aa12.68□□□□□ -0.38
NKX3-1-202ENST00000523261 RAB8AP61006 207 aa12.68□□□□□ -0.38
NKX3-1-202ENST00000523261 RNF4P78317 190 aa12.68□□□□□ -0.38
NKX3-1-202ENST00000523261 FAM27E3Q08E93 113 aa12.68□□□□□ -0.38
NKX3-1-202ENST00000523261 BMPR2Q13873 1038 aa12.68□□□□□ -0.38
NKX3-1-202ENST00000523261 ELAVL1Q15717 326 aaKnown RBP12.68□□□□□ -0.38
NKX3-1-202ENST00000523261 DCST1Q5T197 706 aa12.68□□□□□ -0.38
NKX3-1-202ENST00000523261 C6orf52Q5T4I8 152 aa12.68□□□□□ -0.38
NKX3-1-202ENST00000523261 TMEM132CQ8N3T6 1108 aa12.68□□□□□ -0.38
NKX3-1-202ENST00000523261 ZNF321PQ8N8H1 164 aa12.68□□□□□ -0.38
NKX3-1-202ENST00000523261 FAM71DQ8N9W8 422 aa12.68□□□□□ -0.38
NKX3-1-202ENST00000523261 OR8K3Q8NH51 312 aa12.68□□□□□ -0.38
NKX3-1-202ENST00000523261 NT5CQ8TCD5 201 aa12.68□□□□□ -0.38
NKX3-1-202ENST00000523261 SLC44A1Q8WWI5 657 aa12.68□□□□□ -0.38
NKX3-1-202ENST00000523261 LPGAT1Q92604 370 aa12.68□□□□□ -0.38
NKX3-1-202ENST00000523261 ZFP3Q96NJ6 502 aa12.68□□□□□ -0.38
NKX3-1-202ENST00000523261 MED18Q9BUE0 208 aa12.68□□□□□ -0.38
NKX3-1-202ENST00000523261 BEX2Q9BXY8 128 aa12.68□□□□□ -0.38
NKX3-1-202ENST00000523261 PIGMQ9H3S5 423 aa12.68□□□□□ -0.38
NKX3-1-202ENST00000523261 ZNHIT6Q9NWK9 470 aaKnown RBP12.68□□□□□ -0.38
NKX3-1-202ENST00000523261 PSD3Q9NYI0 1048 aa12.68□□□□□ -0.38
NKX3-1-202ENST00000523261 MED12LQ86YW9 2145 aa12.68□□□□□ -0.38
NKX3-1-202ENST00000523261 MED12Q93074 2177 aa12.67□□□□□ -0.38
NKX3-1-202ENST00000523261 H3BMM5 538 aa12.67□□□□□ -0.38
NKX3-1-202ENST00000523261 OR1F1O43749 312 aa12.67□□□□□ -0.38
NKX3-1-202ENST00000523261 C1QAP02745 245 aa12.67□□□□□ -0.38
NKX3-1-202ENST00000523261 SMIM10L1P0DMW3 83 aa12.67□□□□□ -0.38
NKX3-1-202ENST00000523261 GRIA1P42261 906 aa12.67□□□□□ -0.38
NKX3-1-202ENST00000523261 PCYT1AP49585 367 aa12.67□□□□□ -0.38
NKX3-1-202ENST00000523261 HNRNPFP52597 415 aaKnown RBP12.67□□□□□ -0.38
NKX3-1-202ENST00000523261 HSD17B7P56937 341 aa12.67□□□□□ -0.38
NKX3-1-202ENST00000523261 RGS1Q08116 209 aa12.67□□□□□ -0.38
NKX3-1-202ENST00000523261 TBL3Q12788 808 aaKnown RBP12.67□□□□□ -0.38
NKX3-1-202ENST00000523261 TCEAL1Q15170 157 aa12.67□□□□□ -0.38
NKX3-1-202ENST00000523261 ETFDHQ16134 617 aa12.67□□□□□ -0.38
NKX3-1-202ENST00000523261 PHKG1Q16816 387 aa12.67□□□□□ -0.38
NKX3-1-202ENST00000523261 BBS9Q3SYG4 887 aa12.67□□□□□ -0.38
NKX3-1-202ENST00000523261 PIGGQ5H8A4 983 aa12.67□□□□□ -0.38
NKX3-1-202ENST00000523261 NHSL2Q5HYW2 709 aa12.67□□□□□ -0.38
NKX3-1-202ENST00000523261 BHLHB9Q6PI77 547 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms