RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 TMEM35AQ53FP2 167 aa15.17■□□□□ 0.02
CLN8-206ENST00000523237 GLE1Q53GS7 698 aaKnown RBP15.17■□□□□ 0.02
CLN8-206ENST00000523237 SPINK14Q6IE38 97 aa15.17■□□□□ 0.02
CLN8-206ENST00000523237 GRHL2Q6ISB3 625 aa15.17■□□□□ 0.02
CLN8-206ENST00000523237 CHSY3Q70JA7 882 aa15.17■□□□□ 0.02
CLN8-206ENST00000523237 MAMDC2Q7Z304 686 aaPredicted RBP15.17■□□□□ 0.02
CLN8-206ENST00000523237 TEX9Q8N6V9 391 aa15.17■□□□□ 0.02
CLN8-206ENST00000523237 NOA1Q8NC60 698 aaKnown RBP15.17■□□□□ 0.02
CLN8-206ENST00000523237 FAM98AQ8NCA5 519 aaKnown RBP15.17■□□□□ 0.02
CLN8-206ENST00000523237 APCDD1LQ8NCL9 501 aa15.17■□□□□ 0.02
CLN8-206ENST00000523237 TMEM52Q8NDY8 209 aa15.17■□□□□ 0.02
CLN8-206ENST00000523237 OR7G3Q8NG95 312 aa15.17■□□□□ 0.02
CLN8-206ENST00000523237 IFT81Q8WYA0 676 aa15.17■□□□□ 0.02
CLN8-206ENST00000523237 SCMH1Q96GD3 660 aa15.17■□□□□ 0.02
CLN8-206ENST00000523237 TBCDQ9BTW9 1192 aa15.17■□□□□ 0.02
CLN8-206ENST00000523237 MS4A8Q9BY19 250 aa15.17■□□□□ 0.02
CLN8-206ENST00000523237 FUT8Q9BYC5 575 aa15.17■□□□□ 0.02
CLN8-206ENST00000523237 CDC42EP4Q9H3Q1 356 aaKnown RBP15.17■□□□□ 0.02
CLN8-206ENST00000523237 LYRM4Q9HD34 91 aa15.17■□□□□ 0.02
CLN8-206ENST00000523237 SEC14L3Q9UDX4 400 aa15.17■□□□□ 0.02
CLN8-206ENST00000523237 ADGRE2Q9UHX3 823 aa15.17■□□□□ 0.02
CLN8-206ENST00000523237 MAST4O15021 2626 aa15.16■□□□□ 0.02
CLN8-206ENST00000523237 NEURL1O76050 574 aa15.16■□□□□ 0.02
CLN8-206ENST00000523237 UNC5CO95185 931 aa15.16■□□□□ 0.02
CLN8-206ENST00000523237 ACSL3O95573 720 aa15.16■□□□□ 0.02
CLN8-206ENST00000523237 TGFB1P01137 390 aa15.16■□□□□ 0.02
CLN8-206ENST00000523237 SP1P08047 785 aa15.16■□□□□ 0.02
CLN8-206ENST00000523237 INHBAP08476 426 aa15.16■□□□□ 0.02
CLN8-206ENST00000523237 MST1P26927 711 aa15.16■□□□□ 0.02
CLN8-206ENST00000523237 CYB561P49447 251 aa15.16■□□□□ 0.02
CLN8-206ENST00000523237 MLF1P58340 268 aa15.16■□□□□ 0.02
CLN8-206ENST00000523237 UBAP2Q5T6F2 1119 aaKnown RBP15.16■□□□□ 0.02
CLN8-206ENST00000523237 HIST2H2BCQ6DN03 193 aa15.16■□□□□ 0.02
CLN8-206ENST00000523237 TAOK1Q7L7X3 1001 aa15.16■□□□□ 0.02
CLN8-206ENST00000523237 CLNKQ7Z7G1 428 aa15.16■□□□□ 0.02
CLN8-206ENST00000523237 ARMC10Q8N2F6 343 aa15.16■□□□□ 0.02
CLN8-206ENST00000523237 SLC44A1Q8WWI5 657 aa15.16■□□□□ 0.02
CLN8-206ENST00000523237 CMTM7Q96FZ5 175 aa15.16■□□□□ 0.02
CLN8-206ENST00000523237 VMP1Q96GC9 406 aa15.16■□□□□ 0.02
CLN8-206ENST00000523237 CSF3RQ99062 836 aa15.16■□□□□ 0.02
CLN8-206ENST00000523237 HES7Q9BYE0 225 aa15.16■□□□□ 0.02
CLN8-206ENST00000523237 VPS11Q9H270 941 aa15.16■□□□□ 0.02
CLN8-206ENST00000523237 ADAP2Q9NPF8 381 aa15.16■□□□□ 0.02
CLN8-206ENST00000523237 PPIEQ9UNP9 301 aaKnown RBP15.16■□□□□ 0.02
CLN8-206ENST00000523237 CLDN16Q9Y5I7 305 aa15.16■□□□□ 0.02
CLN8-206ENST00000523237 IKBKGQ9Y6K9 419 aa15.16■□□□□ 0.02
CLN8-206ENST00000523237 SPACA6W5XKT8 324 aa15.16■□□□□ 0.02
CLN8-206ENST00000523237 DOPEY1Q5JWR5 2465 aa15.16■□□□□ 0.02
CLN8-206ENST00000523237 TRBV11-1A0A0K0K1C0 115 aa15.15■□□□□ 0.02
CLN8-206ENST00000523237 TGFBR3LH3BV60 316 aa15.15■□□□□ 0.02
CLN8-206ENST00000523237 KIF2AO00139 706 aaPredicted RBP15.15■□□□□ 0.02
CLN8-206ENST00000523237 KLK8O60259 260 aa15.15■□□□□ 0.02
CLN8-206ENST00000523237 CTNSO60931 367 aa15.15■□□□□ 0.02
CLN8-206ENST00000523237 SLC25A12O75746 678 aa15.15■□□□□ 0.02
CLN8-206ENST00000523237 MLYCDO95822 493 aa15.15■□□□□ 0.02
CLN8-206ENST00000523237 CLDN1O95832 211 aa15.15■□□□□ 0.02
CLN8-206ENST00000523237 HIST1H1TP22492 207 aaPredicted RBP15.15■□□□□ 0.02
CLN8-206ENST00000523237 ATP5A1P25705 553 aaKnown RBP15.15■□□□□ 0.02
CLN8-206ENST00000523237 PPP2R1BP30154 601 aa15.15■□□□□ 0.02
CLN8-206ENST00000523237 SSR2P43308 183 aa15.15■□□□□ 0.02
CLN8-206ENST00000523237 SRSF11Q05519 484 aaKnown RBP15.15■□□□□ 0.02
CLN8-206ENST00000523237 RBPJQ06330 500 aa15.15■□□□□ 0.02
CLN8-206ENST00000523237 ELAVL1Q15717 326 aaKnown RBP15.15■□□□□ 0.02
CLN8-206ENST00000523237 AP5B1Q2VPB7 878 aa15.15■□□□□ 0.02
CLN8-206ENST00000523237 ZNF468Q5VIY5 522 aaPredicted RBP15.15■□□□□ 0.02
CLN8-206ENST00000523237 KHDRBS2Q5VWX1 349 aaKnown RBP15.15■□□□□ 0.02
CLN8-206ENST00000523237 LIPJQ5W064 366 aa15.15■□□□□ 0.02
CLN8-206ENST00000523237 SLC25A25Q6KCM7 469 aa15.15■□□□□ 0.02
CLN8-206ENST00000523237 ZNF793Q6ZN11 406 aa15.15■□□□□ 0.02
CLN8-206ENST00000523237 GALNTL5Q7Z4T8 443 aa15.15■□□□□ 0.02
CLN8-206ENST00000523237 UBE3DQ7Z6J8 389 aa15.15■□□□□ 0.02
CLN8-206ENST00000523237 MYLK4Q86YV6 388 aaPredicted RBP15.15■□□□□ 0.02
CLN8-206ENST00000523237 ACOT4Q8N9L9 421 aa15.15■□□□□ 0.02
CLN8-206ENST00000523237 TMEM125Q96AQ2 219 aa15.15■□□□□ 0.02
CLN8-206ENST00000523237 CCDC77Q9BR77 488 aa15.15■□□□□ 0.02
CLN8-206ENST00000523237 CENPKQ9BS16 269 aa15.15■□□□□ 0.02
CLN8-206ENST00000523237 TRIM45Q9H8W5 580 aaPredicted RBP15.15■□□□□ 0.02
CLN8-206ENST00000523237 ACTR8Q9H981 624 aa15.15■□□□□ 0.02
CLN8-206ENST00000523237 KCMF1Q9P0J7 381 aa15.15■□□□□ 0.02
CLN8-206ENST00000523237 CPSF2Q9P2I0 782 aaKnown RBP15.15■□□□□ 0.02
CLN8-206ENST00000523237 FBXW2Q9UKT8 454 aa15.15■□□□□ 0.02
CLN8-206ENST00000523237 PCDHGA11Q9Y5H2 935 aa15.15■□□□□ 0.02
CLN8-206ENST00000523237 TNPO3Q9Y5L0 923 aaKnown RBP15.15■□□□□ 0.02
CLN8-206ENST00000523237 NAV2Q8IVL1 2488 aa15.15■□□□□ 0.02
CLN8-206ENST00000523237 DIDO1Q9BTC0 2240 aaKnown RBP15.15■□□□□ 0.02
CLN8-206ENST00000523237 CROCCQ5TZA2 2017 aa15.14■□□□□ 0.01
CLN8-206ENST00000523237 ASPDHA6ND91 283 aa15.14■□□□□ 0.01
CLN8-206ENST00000523237 RTCAO00442 366 aaKnown RBP15.14■□□□□ 0.01
CLN8-206ENST00000523237 UGDHO60701 494 aa15.14■□□□□ 0.01
CLN8-206ENST00000523237 SH3BGRLO75368 114 aa15.14■□□□□ 0.01
CLN8-206ENST00000523237 SCELO95171 688 aa15.14■□□□□ 0.01
CLN8-206ENST00000523237 IFNA16P05015 189 aa15.14■□□□□ 0.01
CLN8-206ENST00000523237 TRHRP34981 398 aaPredicted RBP15.14■□□□□ 0.01
CLN8-206ENST00000523237 PIK3CBP42338 1070 aa15.14■□□□□ 0.01
CLN8-206ENST00000523237 PIK3CGP48736 1102 aa15.14■□□□□ 0.01
CLN8-206ENST00000523237 SERPINB9P50453 376 aa15.14■□□□□ 0.01
CLN8-206ENST00000523237 HLCSP50747 726 aa15.14■□□□□ 0.01
CLN8-206ENST00000523237 RAP1GDS1P52306 607 aa15.14■□□□□ 0.01
CLN8-206ENST00000523237 PHEXP78562 749 aa15.14■□□□□ 0.01
CLN8-206ENST00000523237 ALDH6A1Q02252 535 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms