RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 TMEM52Q8NDY8 209 aa14.77□□□□□ -0.04
CLN8-205ENST00000520991 SRFBP1Q8NEF9 429 aaKnown RBP14.77□□□□□ -0.04
CLN8-205ENST00000520991 UBE2E3Q969T4 207 aa14.77□□□□□ -0.04
CLN8-205ENST00000520991 NCLNQ969V3 563 aa14.77□□□□□ -0.04
CLN8-205ENST00000520991 MARVELD3Q96A59 401 aa14.77□□□□□ -0.04
CLN8-205ENST00000520991 KCNC2Q96PR1 638 aa14.77□□□□□ -0.04
CLN8-205ENST00000520991 F2RL3Q96RI0 385 aa14.77□□□□□ -0.04
CLN8-205ENST00000520991 ROGDIQ9GZN7 287 aa14.77□□□□□ -0.04
CLN8-205ENST00000520991 TRIM45Q9H8W5 580 aaPredicted RBP14.77□□□□□ -0.04
CLN8-205ENST00000520991 ADAP2Q9NPF8 381 aa14.77□□□□□ -0.04
CLN8-205ENST00000520991 TINAGQ9UJW2 476 aa14.77□□□□□ -0.04
CLN8-205ENST00000520991 DAPP1Q9UN19 280 aa14.77□□□□□ -0.04
CLN8-205ENST00000520991 KLF13Q9Y2Y9 288 aaPredicted RBP14.77□□□□□ -0.04
CLN8-205ENST00000520991 CACNA1DQ01668 2161 aa14.76□□□□□ -0.05
CLN8-205ENST00000520991 TGFBR3LH3BV60 316 aa14.76□□□□□ -0.05
CLN8-205ENST00000520991 UBXN8O00124 270 aa14.76□□□□□ -0.05
CLN8-205ENST00000520991 ASNA1O43681 348 aa14.76□□□□□ -0.05
CLN8-205ENST00000520991 KERAO60938 352 aa14.76□□□□□ -0.05
CLN8-205ENST00000520991 IFNA16P05015 189 aa14.76□□□□□ -0.05
CLN8-205ENST00000520991 LTA4HP09960 611 aaKnown RBP14.76□□□□□ -0.05
CLN8-205ENST00000520991 PCNAP12004 261 aa14.76□□□□□ -0.05
CLN8-205ENST00000520991 ABOP16442 354 aa14.76□□□□□ -0.05
CLN8-205ENST00000520991 EFTUD2Q15029 972 aaKnown RBP eCLIP14.76□□□□□ -0.05
CLN8-205ENST00000520991 TRADDQ15628 312 aa14.76□□□□□ -0.05
CLN8-205ENST00000520991 TBCCQ15814 346 aa14.76□□□□□ -0.05
CLN8-205ENST00000520991 SP5Q6BEB4 398 aaPredicted RBP14.76□□□□□ -0.05
CLN8-205ENST00000520991 ZDHHC24Q6UX98 284 aa14.76□□□□□ -0.05
CLN8-205ENST00000520991 SPPL2CQ8IUH8 684 aa14.76□□□□□ -0.05
CLN8-205ENST00000520991 SIAH3Q8IW03 269 aa14.76□□□□□ -0.05
CLN8-205ENST00000520991 CYP4Z2PQ8N1L4 340 aa14.76□□□□□ -0.05
CLN8-205ENST00000520991 ARMC10Q8N2F6 343 aa14.76□□□□□ -0.05
CLN8-205ENST00000520991 GHDCQ8N2G8 530 aa14.76□□□□□ -0.05
CLN8-205ENST00000520991 TMEM132CQ8N3T6 1108 aa14.76□□□□□ -0.05
CLN8-205ENST00000520991 ZNF808Q8N4W9 903 aaPredicted RBP14.76□□□□□ -0.05
CLN8-205ENST00000520991 CPSF7Q8N684 471 aaKnown RBP14.76□□□□□ -0.05
CLN8-205ENST00000520991 CSF3RQ99062 836 aa14.76□□□□□ -0.05
CLN8-205ENST00000520991 OPTCQ9UBM4 332 aa14.76□□□□□ -0.05
CLN8-205ENST00000520991 ASB1Q9Y576 335 aa14.76□□□□□ -0.05
CLN8-205ENST00000520991 CLCA3PQ9Y6N3 262 aa14.76□□□□□ -0.05
CLN8-205ENST00000520991 SPACA6W5XKT8 324 aa14.76□□□□□ -0.05
CLN8-205ENST00000520991 MYO7BQ6PIF6 2116 aa14.76□□□□□ -0.05
CLN8-205ENST00000520991 K7EPI3 171 aa14.75□□□□□ -0.05
CLN8-205ENST00000520991 CYR61O00622 381 aa14.75□□□□□ -0.05
CLN8-205ENST00000520991 ITGA10O75578 1167 aa14.75□□□□□ -0.05
CLN8-205ENST00000520991 ZFAND5O76080 213 aa14.75□□□□□ -0.05
CLN8-205ENST00000520991 EPORP19235 508 aa14.75□□□□□ -0.05
CLN8-205ENST00000520991 STX4Q12846 297 aa14.75□□□□□ -0.05
CLN8-205ENST00000520991 DLG1Q12959 904 aa14.75□□□□□ -0.05
CLN8-205ENST00000520991 BMPR2Q13873 1038 aa14.75□□□□□ -0.05
CLN8-205ENST00000520991 ELAVL1Q15717 326 aaKnown RBP14.75□□□□□ -0.05
CLN8-205ENST00000520991 MED27Q6P2C8 311 aa14.75□□□□□ -0.05
CLN8-205ENST00000520991 ISCA2Q86U28 154 aa14.75□□□□□ -0.05
CLN8-205ENST00000520991 ZNF227Q86WZ6 799 aa14.75□□□□□ -0.05
CLN8-205ENST00000520991 POGLUT1Q8NBL1 392 aa14.75□□□□□ -0.05
CLN8-205ENST00000520991 DAZLQ92904 295 aaKnown RBP14.75□□□□□ -0.05
CLN8-205ENST00000520991 MRRFQ96E11 262 aaKnown RBP14.75□□□□□ -0.05
CLN8-205ENST00000520991 TBCDQ9BTW9 1192 aa14.75□□□□□ -0.05
CLN8-205ENST00000520991 MS4A8Q9BY19 250 aa14.75□□□□□ -0.05
CLN8-205ENST00000520991 LYRM4Q9HD34 91 aa14.75□□□□□ -0.05
CLN8-205ENST00000520991 PRDM7Q9NQW5 492 aa14.75□□□□□ -0.05
CLN8-205ENST00000520991 PPIEQ9UNP9 301 aaKnown RBP14.75□□□□□ -0.05
CLN8-205ENST00000520991 ZNF835Q9Y2P0 537 aa14.75□□□□□ -0.05
CLN8-205ENST00000520991 ACOT9Q9Y305 439 aa14.75□□□□□ -0.05
CLN8-205ENST00000520991 CLDN16Q9Y5I7 305 aa14.75□□□□□ -0.05
CLN8-205ENST00000520991 KLF2Q9Y5W3 355 aaPredicted RBP14.75□□□□□ -0.05
CLN8-205ENST00000520991 A0A087X1B8 175 aa14.74□□□□□ -0.05
CLN8-205ENST00000520991 ESYT3A0FGR9 886 aa14.74□□□□□ -0.05
CLN8-205ENST00000520991 SYCE1LA8MT33 242 aa14.74□□□□□ -0.05
CLN8-205ENST00000520991 KLRC4-KLRK1H3BQV0 150 aa14.74□□□□□ -0.05
CLN8-205ENST00000520991 TFECO14948 347 aaPredicted RBP14.74□□□□□ -0.05
CLN8-205ENST00000520991 CTNSO60931 367 aa14.74□□□□□ -0.05
CLN8-205ENST00000520991 SH3BGRLO75368 114 aa14.74□□□□□ -0.05
CLN8-205ENST00000520991 SERPINB1P30740 379 aa14.74□□□□□ -0.05
CLN8-205ENST00000520991 CASP2P42575 452 aa14.74□□□□□ -0.05
CLN8-205ENST00000520991 SSR2P43308 183 aa14.74□□□□□ -0.05
CLN8-205ENST00000520991 MEOX1P50221 254 aa14.74□□□□□ -0.05
CLN8-205ENST00000520991 SSR4P51571 173 aa14.74□□□□□ -0.05
CLN8-205ENST00000520991 SMSP52788 366 aa14.74□□□□□ -0.05
CLN8-205ENST00000520991 HSF1Q00613 529 aa14.74□□□□□ -0.05
CLN8-205ENST00000520991 SLC7A5Q01650 507 aa14.74□□□□□ -0.05
CLN8-205ENST00000520991 CKAP4Q07065 602 aaKnown RBP14.74□□□□□ -0.05
CLN8-205ENST00000520991 NAA30Q147X3 362 aaPredicted RBP14.74□□□□□ -0.05
CLN8-205ENST00000520991 FAM83EQ2M2I3 478 aa14.74□□□□□ -0.05
CLN8-205ENST00000520991 AP5B1Q2VPB7 878 aa14.74□□□□□ -0.05
CLN8-205ENST00000520991 TMEM35AQ53FP2 167 aa14.74□□□□□ -0.05
CLN8-205ENST00000520991 RNFT1Q5M7Z0 435 aa14.74□□□□□ -0.05
CLN8-205ENST00000520991 C8orf74Q6P047 294 aa14.74□□□□□ -0.05
CLN8-205ENST00000520991 BNC2Q6ZN30 1099 aaPredicted RBP14.74□□□□□ -0.05
CLN8-205ENST00000520991 Q6ZPB1 254 aaPredicted RBP14.74□□□□□ -0.05
CLN8-205ENST00000520991 CHSY3Q70JA7 882 aa14.74□□□□□ -0.05
CLN8-205ENST00000520991 ZNF572Q7Z3I7 529 aaPredicted RBP14.74□□□□□ -0.05
CLN8-205ENST00000520991 CCDC91Q7Z6B0 441 aa14.74□□□□□ -0.05
CLN8-205ENST00000520991 SULF2Q8IWU5 870 aa14.74□□□□□ -0.05
CLN8-205ENST00000520991 ZNF473Q8WTR7 871 aaKnown RBP14.74□□□□□ -0.05
CLN8-205ENST00000520991 UBTD2Q8WUN7 234 aa14.74□□□□□ -0.05
CLN8-205ENST00000520991 NXNL1Q96CM4 212 aa14.74□□□□□ -0.05
CLN8-205ENST00000520991 ATOH8Q96SQ7 321 aa14.74□□□□□ -0.05
CLN8-205ENST00000520991 RUBCNLQ9H714 662 aa14.74□□□□□ -0.05
CLN8-205ENST00000520991 IGSF5Q9NSI5 407 aa14.74□□□□□ -0.05
CLN8-205ENST00000520991 ZNF223Q9UK11 482 aaPredicted RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms