RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 TNPO3Q9Y5L0 923 aaKnown RBP12.47□□□□□ -0.41
VEGFA-219ENST00000518824 MYO18BQ8IUG5 2567 aa12.46□□□□□ -0.41
VEGFA-219ENST00000518824 H0YIV9 168 aa12.46□□□□□ -0.41
VEGFA-219ENST00000518824 LDB3O75112 727 aa12.46□□□□□ -0.41
VEGFA-219ENST00000518824 EEDO75530 441 aaKnown RBP12.46□□□□□ -0.41
VEGFA-219ENST00000518824 CLDN9O95484 217 aa12.46□□□□□ -0.41
VEGFA-219ENST00000518824 HIST1H1TP22492 207 aaPredicted RBP12.46□□□□□ -0.41
VEGFA-219ENST00000518824 GNLYP22749 145 aa12.46□□□□□ -0.41
VEGFA-219ENST00000518824 CCNG1P51959 295 aa12.46□□□□□ -0.41
VEGFA-219ENST00000518824 HNRNPH2P55795 449 aaKnown RBP12.46□□□□□ -0.41
VEGFA-219ENST00000518824 ZNF33BQ06732 778 aa12.46□□□□□ -0.41
VEGFA-219ENST00000518824 MRPL49Q13405 166 aaKnown RBP12.46□□□□□ -0.41
VEGFA-219ENST00000518824 H3F3CQ6NXT2 135 aa12.46□□□□□ -0.41
VEGFA-219ENST00000518824 CRLF3Q8IUI8 442 aa12.46□□□□□ -0.41
VEGFA-219ENST00000518824 BEST3Q8N1M1 668 aa12.46□□□□□ -0.41
VEGFA-219ENST00000518824 M1APQ8TC57 530 aa12.46□□□□□ -0.41
VEGFA-219ENST00000518824 SREK1Q8WXA9 508 aaKnown RBP12.46□□□□□ -0.41
VEGFA-219ENST00000518824 ATP6V1E2Q96A05 226 aa12.46□□□□□ -0.41
VEGFA-219ENST00000518824 CMTM7Q96FZ5 175 aa12.46□□□□□ -0.41
VEGFA-219ENST00000518824 KCNC2Q96PR1 638 aa12.46□□□□□ -0.41
VEGFA-219ENST00000518824 LPAR4Q99677 370 aa12.46□□□□□ -0.41
VEGFA-219ENST00000518824 TBCDQ9BTW9 1192 aa12.46□□□□□ -0.41
VEGFA-219ENST00000518824 NTMT1Q9BV86 223 aa12.46□□□□□ -0.41
VEGFA-219ENST00000518824 ILKAPQ9H0C8 392 aaPredicted RBP12.46□□□□□ -0.41
VEGFA-219ENST00000518824 CLMPQ9H6B4 373 aa12.46□□□□□ -0.41
VEGFA-219ENST00000518824 EPS8L2Q9H6S3 715 aa12.46□□□□□ -0.41
VEGFA-219ENST00000518824 COPS7BQ9H9Q2 264 aaPredicted RBP12.46□□□□□ -0.41
VEGFA-219ENST00000518824 KCNK13Q9HB14 408 aa12.46□□□□□ -0.41
VEGFA-219ENST00000518824 MMP25Q9NPA2 562 aa12.46□□□□□ -0.41
VEGFA-219ENST00000518824 PNO1Q9NRX1 252 aaKnown RBP12.46□□□□□ -0.41
VEGFA-219ENST00000518824 MAP10Q9P2G4 905 aa12.46□□□□□ -0.41
VEGFA-219ENST00000518824 ZNF223Q9UK11 482 aaPredicted RBP12.46□□□□□ -0.41
VEGFA-219ENST00000518824 PCDHGA11Q9Y5H2 935 aa12.46□□□□□ -0.41
VEGFA-219ENST00000518824 UBR5O95071 2799 aaPredicted RBP12.46□□□□□ -0.42
VEGFA-219ENST00000518824 ARHGAP10A1A4S6 786 aa12.45□□□□□ -0.42
VEGFA-219ENST00000518824 SAGE2PA6NJ88 616 aa12.45□□□□□ -0.42
VEGFA-219ENST00000518824 ESPNB1AK53 854 aa12.45□□□□□ -0.42
VEGFA-219ENST00000518824 TCP11X1B4DZS4 312 aa12.45□□□□□ -0.42
VEGFA-219ENST00000518824 TMPRSS11DO60235 418 aa12.45□□□□□ -0.42
VEGFA-219ENST00000518824 UGDHO60701 494 aa12.45□□□□□ -0.42
VEGFA-219ENST00000518824 OR4F21O95013 312 aa12.45□□□□□ -0.42
VEGFA-219ENST00000518824 SCELO95171 688 aa12.45□□□□□ -0.42
VEGFA-219ENST00000518824 SLU7O95391 586 aaKnown RBP12.45□□□□□ -0.42
VEGFA-219ENST00000518824 GBAP04062 536 aa12.45□□□□□ -0.42
VEGFA-219ENST00000518824 ICAM2P13598 275 aa12.45□□□□□ -0.42
VEGFA-219ENST00000518824 BSGP35613 385 aa12.45□□□□□ -0.42
VEGFA-219ENST00000518824 ARL1P40616 181 aaPredicted RBP12.45□□□□□ -0.42
VEGFA-219ENST00000518824 PIK3CBP42338 1070 aa12.45□□□□□ -0.42
VEGFA-219ENST00000518824 SSR2P43308 183 aa12.45□□□□□ -0.42
VEGFA-219ENST00000518824 ARG2P78540 354 aa12.45□□□□□ -0.42
VEGFA-219ENST00000518824 SLC13A2Q13183 592 aa12.45□□□□□ -0.42
VEGFA-219ENST00000518824 SLAMF1Q13291 335 aa12.45□□□□□ -0.42
VEGFA-219ENST00000518824 ZNF169Q14929 603 aaPredicted RBP12.45□□□□□ -0.42
VEGFA-219ENST00000518824 TMEM35AQ53FP2 167 aa12.45□□□□□ -0.42
VEGFA-219ENST00000518824 SGO1Q5FBB7 561 aa12.45□□□□□ -0.42
VEGFA-219ENST00000518824 ZNF678Q5SXM1 525 aa12.45□□□□□ -0.42
VEGFA-219ENST00000518824 ZNF468Q5VIY5 522 aaPredicted RBP12.45□□□□□ -0.42
VEGFA-219ENST00000518824 C18orf63Q68DL7 685 aa12.45□□□□□ -0.42
VEGFA-219ENST00000518824 OR4C11Q6IEV9 310 aa12.45□□□□□ -0.42
VEGFA-219ENST00000518824 OR4N5Q8IXE1 308 aa12.45□□□□□ -0.42
VEGFA-219ENST00000518824 ZNF321PQ8N8H1 164 aa12.45□□□□□ -0.42
VEGFA-219ENST00000518824 OR1N1Q8NGS0 311 aa12.45□□□□□ -0.42
VEGFA-219ENST00000518824 ELP5Q8TE02 316 aa12.45□□□□□ -0.42
VEGFA-219ENST00000518824 TRPC4APQ8TEL6 797 aa12.45□□□□□ -0.42
VEGFA-219ENST00000518824 DOK4Q8TEW6 326 aa12.45□□□□□ -0.42
VEGFA-219ENST00000518824 AENQ8WTP8 325 aaKnown RBP12.45□□□□□ -0.42
VEGFA-219ENST00000518824 TM9SF4Q92544 642 aa12.45□□□□□ -0.42
VEGFA-219ENST00000518824 ANKRD9Q96BM1 317 aaPredicted RBP12.45□□□□□ -0.42
VEGFA-219ENST00000518824 HBEGFQ99075 208 aa12.45□□□□□ -0.42
VEGFA-219ENST00000518824 C1QTNF3Q9BXJ4 246 aa12.45□□□□□ -0.42
VEGFA-219ENST00000518824 HES7Q9BYE0 225 aa12.45□□□□□ -0.42
VEGFA-219ENST00000518824 ANKRD10Q9NXR5 420 aa12.45□□□□□ -0.42
VEGFA-219ENST00000518824 TSC22D4Q9Y3Q8 395 aa12.45□□□□□ -0.42
VEGFA-219ENST00000518824 MMACHCQ9Y4U1 282 aa12.45□□□□□ -0.42
VEGFA-219ENST00000518824 G3V2L1 256 aa12.44□□□□□ -0.42
VEGFA-219ENST00000518824 PRKNO60260 465 aaPredicted RBP12.44□□□□□ -0.42
VEGFA-219ENST00000518824 KLHL41O60662 606 aa12.44□□□□□ -0.42
VEGFA-219ENST00000518824 WISP2O76076 250 aa12.44□□□□□ -0.42
VEGFA-219ENST00000518824 MYO1DO94832 1006 aa12.44□□□□□ -0.42
VEGFA-219ENST00000518824 UQCRHP07919 91 aa12.44□□□□□ -0.42
VEGFA-219ENST00000518824 TNFSF10P50591 281 aa12.44□□□□□ -0.42
VEGFA-219ENST00000518824 GPR143P51810 404 aa12.44□□□□□ -0.42
VEGFA-219ENST00000518824 HERVK_113P63132 956 aa12.44□□□□□ -0.42
VEGFA-219ENST00000518824 CLCQ05315 142 aa12.44□□□□□ -0.42
VEGFA-219ENST00000518824 EXT1Q16394 746 aa12.44□□□□□ -0.42
VEGFA-219ENST00000518824 ERCC6LQ2NKX8 1250 aa12.44□□□□□ -0.42
VEGFA-219ENST00000518824 AP5B1Q2VPB7 878 aa12.44□□□□□ -0.42
VEGFA-219ENST00000518824 ACER2Q5QJU3 275 aa12.44□□□□□ -0.42
VEGFA-219ENST00000518824 MRM1Q6IN84 353 aaKnown RBP12.44□□□□□ -0.42
VEGFA-219ENST00000518824 METTL2BQ6P1Q9 378 aaKnown RBP12.44□□□□□ -0.42
VEGFA-219ENST00000518824 C16orf47Q6ZP98 133 aaPredicted RBP12.44□□□□□ -0.42
VEGFA-219ENST00000518824 DGAT2L6Q6ZPD8 337 aa12.44□□□□□ -0.42
VEGFA-219ENST00000518824 CHSY3Q70JA7 882 aa12.44□□□□□ -0.42
VEGFA-219ENST00000518824 MILR1Q7Z6M3 343 aa12.44□□□□□ -0.42
VEGFA-219ENST00000518824 TDRPQ86YL5 185 aa12.44□□□□□ -0.42
VEGFA-219ENST00000518824 ZNF595Q8IYB9 648 aa12.44□□□□□ -0.42
VEGFA-219ENST00000518824 IQCKQ8N0W5 287 aa12.44□□□□□ -0.42
VEGFA-219ENST00000518824 C4orf33Q8N1A6 199 aa12.44□□□□□ -0.42
VEGFA-219ENST00000518824 APCDD1LQ8NCL9 501 aa12.44□□□□□ -0.42
VEGFA-219ENST00000518824 ACMSDQ8TDX5 336 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms