RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 UTS2RQ9UKP6 389 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 SHROOM3Q8TF72 1996 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 LOC285095A0A1B0GVY8 99 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 RBM47A0AV96 593 aaKnown RBP10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 KHDRBS3O75525 346 aaKnown RBP10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 DDX6P26196 483 aaKnown RBP eCLIP10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 CTSOP43234 321 aaPredicted RBP10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 OR1E2P47887 323 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 MASP1P48740 699 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 CCT3P49368 545 aaKnown RBP10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 NEK5Q6P3R8 708 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 CADM3Q8N126 398 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 OR6K6Q8NGW6 343 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 RPL3LQ92901 407 aaKnown RBP10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 TRNT1Q96Q11 434 aaKnown RBP10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 FARSBQ9NSD9 589 aaKnown RBP10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 DCAF13Q9NV06 445 aaKnown RBP10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 MALT1Q9UDY8 824 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 CFL2Q9Y281 166 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 SCN1AP35498 2009 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 FER1L6Q2WGJ9 1857 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 SOCS5O75159 536 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 UPK1BO75841 260 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 C6orf47O95873 294 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 CH25HO95992 272 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 RETP07949 1114 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 CYBAP13498 195 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 TYRP1P17643 537 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 ZNF45Q02386 682 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 LASP1Q14847 261 aaKnown RBP10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 OXA1LQ15070 435 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 TSTQ16762 297 aaKnown RBP10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 VTCN1Q7Z7D3 282 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 OXR1Q8N573 874 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 SLC22A18Q96BI1 424 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 EFHD2Q96C19 240 aaPredicted RBP10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 C17orf62Q9BQA9 187 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 ZBTB20Q9HC78 741 aaPredicted RBP10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 C14orf119Q9NWQ9 140 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 RIMKLBQ9ULI2 386 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 PMF1-BGLAPU3KQ54 211 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 CENPFP49454 3210 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 KLHL18O94889 574 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 ALPPP05187 535 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 KHKP50053 298 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 SLC14A2Q15849 920 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 IQCCQ4KMZ1 466 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 TSPAN33Q86UF1 283 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 PIANPQ8IYJ0 282 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 RNASE11Q8TAA1 199 aaKnown RBP10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 ZNF675Q8TD23 568 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 SLC5A11Q8WWX8 675 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 OMA1Q96E52 524 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 SMIM14Q96QK8 99 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 CITED4Q96RK1 184 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 NEURL2Q9BR09 285 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 POLR2AP24928 1970 aaKnown RBP10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 CACNG3O60359 315 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 SOX14O95416 240 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 PRKAR1AP10644 381 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 GADD45AP24522 165 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 VIPR2P41587 438 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 BLKP51451 505 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 NTHL1P78549 312 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 NPRL3Q12980 569 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 SMN1Q16637 294 aaKnown RBP10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 UAP1L1Q3KQV9 507 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 CLLU1OSQ5K130 101 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 AGAP7PQ5VUJ5 663 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 PRSS48Q7RTY5 328 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 TMEM25Q86YD3 366 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 SAMD14Q8IZD0 417 aaPredicted RBP10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 DEFB119Q8N690 84 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 OR9A1PQ8NGU1 263 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 RFKQ969G6 155 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 BOCQ9BWV1 1114 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 RAB11FIP5Q9BXF6 653 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 BTBD1Q9H0C5 482 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 MTG2Q9H4K7 406 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 MKLN1Q9UL63 735 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 HSPE1-MOB4S4R3N1 261 aa10.42□□□□□ -0.74
PCDHGA1-202ENST00000517417 A0A1B0GTL3 188 aa10.41□□□□□ -0.74
PCDHGA1-202ENST00000517417 REM1O75628 298 aa10.41□□□□□ -0.74
PCDHGA1-202ENST00000517417 HSD17B2P37059 387 aa10.41□□□□□ -0.74
PCDHGA1-202ENST00000517417 ID2Q02363 134 aa10.41□□□□□ -0.74
PCDHGA1-202ENST00000517417 SCN1BQ07699 218 aa10.41□□□□□ -0.74
PCDHGA1-202ENST00000517417 CTU2Q2VPK5 515 aaKnown RBP10.41□□□□□ -0.74
PCDHGA1-202ENST00000517417 FBXO43Q4G163 708 aa10.41□□□□□ -0.74
PCDHGA1-202ENST00000517417 ZNF311Q5JNZ3 666 aa10.41□□□□□ -0.74
PCDHGA1-202ENST00000517417 ANKRD34AQ69YU3 496 aa10.41□□□□□ -0.74
PCDHGA1-202ENST00000517417 NOXRED1Q6NXP6 359 aa10.41□□□□□ -0.74
PCDHGA1-202ENST00000517417 TUBA3EQ6PEY2 450 aa10.41□□□□□ -0.74
PCDHGA1-202ENST00000517417 Q6ZSR9 355 aa10.41□□□□□ -0.74
PCDHGA1-202ENST00000517417 NPAS3Q8IXF0 933 aa10.41□□□□□ -0.74
PCDHGA1-202ENST00000517417 PAPD5Q8NDF8 572 aaKnown RBP10.41□□□□□ -0.74
PCDHGA1-202ENST00000517417 ZNF548Q8NEK5 533 aaPredicted RBP10.41□□□□□ -0.74
PCDHGA1-202ENST00000517417 GLYATL1Q969I3 302 aa10.41□□□□□ -0.74
PCDHGA1-202ENST00000517417 IL17FQ96PD4 163 aa10.41□□□□□ -0.74
PCDHGA1-202ENST00000517417 INPP5KQ9BT40 448 aa10.41□□□□□ -0.74
PCDHGA1-202ENST00000517417 RNF38Q9H0F5 515 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms