RNA–Protein interactions for RNA: ENST00000515064.5

LDB2-216, Transcript of LIM domain binding 2, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene LDB2, Length 2,295 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-216ENST00000515064 PDGFCQ9NRA1 345 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 NUDT15Q9NV35 164 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 THUMPD1Q9NXG2 353 aaKnown RBP6.89□□□□□ -1.31
LDB2-216ENST00000515064 MS4A12Q9NXJ0 267 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 MED11Q9P086 117 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 COMMD3Q9UBI1 195 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 FAM198AQ9UFP1 575 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 CPA4Q9UI42 421 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 GPR160Q9UJ42 338 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 CBY1Q9Y3M2 126 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 PPP2R3BQ9Y5P8 575 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 REV3LO60673 3130 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 MEIKINA0A087WXM9 373 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 ZNF729A6NN14 1252 aaPredicted RBP6.89□□□□□ -1.31
LDB2-216ENST00000515064 L7N2F9 121 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 IFRD1O00458 451 aaPredicted RBP6.89□□□□□ -1.31
LDB2-216ENST00000515064 ACKR2O00590 384 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 FFAR3O14843 346 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 PER2O15055 1255 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 GPR42O15529 346 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 SDC3O75056 442 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 OR4F21O95013 312 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 SPP1P10451 314 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 GOT1P17174 413 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 IL1RNP18510 177 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 SLC6A1P30531 599 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 TSPAN7P41732 249 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 HSPA7P48741 367 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 AGFG1P52594 562 aaKnown RBP6.89□□□□□ -1.31
LDB2-216ENST00000515064 RIDAP52758 137 aaKnown RBP6.89□□□□□ -1.31
LDB2-216ENST00000515064 ITGA1P56199 1179 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 NFKB2Q00653 900 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 DSC2Q02487 901 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 TNFAIP1Q13829 316 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 LRRC32Q14392 662 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 TAF1AQ15573 450 aaPredicted RBP6.89□□□□□ -1.31
LDB2-216ENST00000515064 UGCGQ16739 394 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 ZNF792Q3KQV3 632 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 AVPI1Q5T686 147 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 OR4F3Q6IEY1 312 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 C3orf33Q6P1S2 294 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 NOTUMQ6P988 496 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 ZNF549Q6P9A3 640 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 METAP1DQ6UB28 335 aaPredicted RBP6.89□□□□□ -1.31
LDB2-216ENST00000515064 OTOP2Q7RTS6 562 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 KLHL36Q8N4N3 616 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 ATPAF2Q8N5M1 289 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 B3GNT7Q8NFL0 401 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 IPMKQ8NFU5 416 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 SCARB1Q8WTV0 552 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 ZDHHC1Q8WTX9 485 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 GLYATL2Q8WU03 294 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 EDARADDQ8WWZ3 215 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 SCMH1Q96GD3 660 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 PIWIL1Q96J94 861 aaKnown RBP6.89□□□□□ -1.31
LDB2-216ENST00000515064 KCNJ15Q99712 375 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 TINF2Q9BSI4 451 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 CCM2Q9BSQ5 444 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 CDCA4Q9BXL8 241 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 GABARAPL3Q9BY60 117 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 SYNDIG1Q9H7V2 258 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 HHATLQ9HCP6 504 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 CHMP1AQ9HD42 196 aaPredicted RBP6.89□□□□□ -1.31
LDB2-216ENST00000515064 C14orf105Q9NVL8 296 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 TMEM45AQ9NWC5 275 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 DUSP12Q9UNI6 340 aa6.89□□□□□ -1.31
LDB2-216ENST00000515064 SAMD4AQ9UPU9 718 aaKnown RBP6.89□□□□□ -1.31
LDB2-216ENST00000515064 A0A1B0GV90 55 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 LOC390937A0A1W2PQ73 354 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 ARNTLO00327 626 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 GFRA2O00451 464 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 TERTO14746 1132 aaKnown RBP6.88□□□□□ -1.31
LDB2-216ENST00000515064 SOX30O94993 753 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 GADD45GO95257 159 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 MT-CYBP00156 380 aaPredicted RBP6.88□□□□□ -1.31
LDB2-216ENST00000515064 GLUD1P00367 558 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 FABP3P05413 133 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 HIST1H2AGP0C0S8 130 aaPredicted RBP6.88□□□□□ -1.31
LDB2-216ENST00000515064 ZDHHC11BP0C7U3 371 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 HIST1H2ADP20671 130 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 PAICSP22234 425 aaKnown RBP6.88□□□□□ -1.31
LDB2-216ENST00000515064 FPR3P25089 353 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 ITGB7P26010 798 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 PTBP1P26599 531 aaKnown RBP eCLIP6.88□□□□□ -1.31
LDB2-216ENST00000515064 PBX3P40426 434 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 EIF2S3P41091 472 aaKnown RBP6.88□□□□□ -1.31
LDB2-216ENST00000515064 CRYBB2P43320 205 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 ASPAP45381 313 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 PTPN11Q06124 597 aaPredicted RBP6.88□□□□□ -1.31
LDB2-216ENST00000515064 SERTAD2Q14140 314 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 GRIN2CQ14957 1233 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 P2RY14Q15391 338 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 NR6A1Q15406 480 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 UGT8Q16880 541 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 MICBQ29980 383 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 EIF2S3LQ2VIR3 472 aaKnown RBP6.88□□□□□ -1.31
LDB2-216ENST00000515064 ZNF628Q5EBL2 1059 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 TEX30Q5JUR7 227 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 HIST2H2AA3Q6FI13 130 aa6.88□□□□□ -1.31
LDB2-216ENST00000515064 NAPEPLDQ6IQ20 393 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms