RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 IFNA2P01563 188 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 WNT1P04628 370 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 CDK1P06493 297 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 HBQ1P09105 142 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 RBP1P09455 135 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 HSD3B1P14060 373 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 DPEP1P16444 411 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 WARSP23381 471 aaKnown RBP4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 RPS12P25398 132 aaKnown RBP4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 HMGCLP35914 325 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 SYKP43405 635 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 CCR10P46092 362 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 LEPRP48357 1165 aaKnown RBP4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 RIDAP52758 137 aaKnown RBP4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 PNLIPRP1P54315 467 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 PRKAA2P54646 552 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 CDH4P55283 916 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 ARL4CP56559 192 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 GPX6P59796 221 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 RPP30P78346 268 aaKnown RBP4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 ASIC1P78348 528 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 MYBPC1Q00872 1141 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 PUDPQ08623 228 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 ITGADQ13349 1161 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 DLG2Q15700 870 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 KYNUQ16719 465 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 ZBED5Q49AG3 693 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 CTXN3Q4LDR2 81 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 FAM98BQ52LJ0 330 aaKnown RBP4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 HSD17B12Q53GQ0 312 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 ACSBG2Q5FVE4 666 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 SLC9C2Q5TAH2 1124 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 FKBP1CQ5VVH2 108 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 FAM91A1Q658Y4 838 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 ZFP1Q6P2D0 407 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 BHLHB9Q6PI77 547 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 PARM1Q6UWI2 310 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 FAM47EQ6ZV65 393 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 RRAGAQ7L523 313 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 PRSS42Q7Z5A4 293 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 IRF2BP2Q7Z5L9 587 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 DSG4Q86SJ6 1040 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 PLCZ1Q86YW0 608 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 ARMC8Q8IUR7 673 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 FOXP4Q8IVH2 680 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 CRYBG2Q8N1P7 616 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 SLC25A41Q8N5S1 370 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 C10orf53Q8N6V4 93 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 SNX31Q8N9S9 440 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 ZNF548Q8NEK5 533 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 CSGALNACT1Q8TDX6 532 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 WIPF2Q8TF74 440 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 CLEC4CQ8WTT0 213 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 U2AF1L4Q8WU68 220 aaKnown RBP4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 UBLCP1Q8WVY7 318 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 PTERQ96BW5 349 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 ZNF419Q96HQ0 510 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 LURAP1Q96LR2 239 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 PPP3R2Q96LZ3 170 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 DOK1Q99704 481 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 PRMT1Q99873 361 aaKnown RBP4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 TMEM246Q9BRR3 403 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 SF3B5Q9BWJ5 86 aaKnown RBP4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 PAPOLGQ9BWT3 736 aaKnown RBP4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 MND1Q9BWT6 205 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 GTPBP2Q9BX10 602 aaKnown RBP4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 NFKBIZQ9BYH8 718 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 ROPN1BQ9BZX4 212 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 EBF3Q9H4W6 596 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 AAMDCQ9H7C9 122 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 ROPN1Q9HAT0 212 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 NMUR1Q9HB89 426 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 ANKHQ9HCJ1 492 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 EPB41L5Q9HCM4 733 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 CHMP1AQ9HD42 196 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 PNRC2Q9NPJ4 139 aaKnown RBP4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 DNAJC11Q9NVH1 559 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 NKIRAS1Q9NYS0 192 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 VPS54Q9P1Q0 977 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 PSMC3IPQ9P2W1 217 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 CNOT8Q9UFF9 292 aaKnown RBP4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 POLLQ9UGP5 575 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 IL19Q9UHD0 177 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 GUCA1BQ9UMX6 200 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 PCDHGB4Q9UN71 923 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 PLCL2Q9UPR0 1127 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 CRYL1Q9Y2S2 319 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 NDUFAF1Q9Y375 327 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 FKBP7Q9Y680 259 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 CYP46A1Q9Y6A2 500 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 SF3B1O75533 1304 aaKnown RBP eCLIP4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 UBE4BO95155 1302 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 A0A087WXM4 84 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 A0A0G2JLW4 131 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 LOC100506127A0A0U1RQW1 187 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 TMEM272A0A1B0GTI8 110 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 C17orf102A2RUQ5 167 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 LINC00862A6NCI5 91 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 CXorf65A6NEN9 183 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms