RNA–Protein interactions for RNA: ENST00000508708.1

CSNK1G3-204, Transcript of casein kinase 1 gamma 3, humanhuman

TSL 2

Gene CSNK1G3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-204ENST00000508708 RPS17P08708 135 aaKnown RBP21.93■■□□□ 1.1
CSNK1G3-204ENST00000508708 HIST1H1TP22492 207 aaPredicted RBP21.93■■□□□ 1.1
CSNK1G3-204ENST00000508708 TNFRSF8P28908 595 aa21.93■■□□□ 1.1
CSNK1G3-204ENST00000508708 MRPL49Q13405 166 aaKnown RBP21.93■■□□□ 1.1
CSNK1G3-204ENST00000508708 ACER2Q5QJU3 275 aa21.93■■□□□ 1.1
CSNK1G3-204ENST00000508708 DEPDC1Q5TB30 811 aa21.93■■□□□ 1.1
CSNK1G3-204ENST00000508708 MYLK4Q86YV6 388 aaPredicted RBP21.93■■□□□ 1.1
CSNK1G3-204ENST00000508708 ZNF595Q8IYB9 648 aa21.93■■□□□ 1.1
CSNK1G3-204ENST00000508708 BEST3Q8N1M1 668 aa21.93■■□□□ 1.1
CSNK1G3-204ENST00000508708 KIF2BQ8N4N8 673 aa21.93■■□□□ 1.1
CSNK1G3-204ENST00000508708 ACOT4Q8N9L9 421 aa21.93■■□□□ 1.1
CSNK1G3-204ENST00000508708 OR52B6Q8NGF0 335 aa21.93■■□□□ 1.1
CSNK1G3-204ENST00000508708 OR1N1Q8NGS0 311 aa21.93■■□□□ 1.1
CSNK1G3-204ENST00000508708 WDR20Q8TBZ3 569 aa21.93■■□□□ 1.1
CSNK1G3-204ENST00000508708 MZB1Q8WU39 189 aa21.93■■□□□ 1.1
CSNK1G3-204ENST00000508708 SCYL1Q96KG9 808 aa21.93■■□□□ 1.1
CSNK1G3-204ENST00000508708 NSUN5Q96P11 429 aaKnown RBP21.93■■□□□ 1.1
CSNK1G3-204ENST00000508708 ROGDIQ9GZN7 287 aa21.93■■□□□ 1.1
CSNK1G3-204ENST00000508708 OR51B5Q9H339 312 aa21.93■■□□□ 1.1
CSNK1G3-204ENST00000508708 LYRM4Q9HD34 91 aa21.93■■□□□ 1.1
CSNK1G3-204ENST00000508708 PRTFDC1Q9NRG1 225 aa21.93■■□□□ 1.1
CSNK1G3-204ENST00000508708 MAP10Q9P2G4 905 aa21.93■■□□□ 1.1
CSNK1G3-204ENST00000508708 RNF11Q9Y3C5 154 aa21.93■■□□□ 1.1
CSNK1G3-204ENST00000508708 PCDHGA11Q9Y5H2 935 aa21.93■■□□□ 1.1
CSNK1G3-204ENST00000508708 SH3BGRLO75368 114 aa21.92■■□□□ 1.1
CSNK1G3-204ENST00000508708 CBX6O95503 412 aa21.92■■□□□ 1.1
CSNK1G3-204ENST00000508708 TRAF3Q13114 568 aa21.92■■□□□ 1.1
CSNK1G3-204ENST00000508708 DDX39BQ13838 428 aaKnown RBP21.92■■□□□ 1.1
CSNK1G3-204ENST00000508708 TERF2Q15554 542 aa21.92■■□□□ 1.1
CSNK1G3-204ENST00000508708 TEX35Q5T0J7 233 aa21.92■■□□□ 1.1
CSNK1G3-204ENST00000508708 LGSNQ5TDP6 509 aa21.92■■□□□ 1.1
CSNK1G3-204ENST00000508708 ARMC2Q8NEN0 867 aa21.92■■□□□ 1.1
CSNK1G3-204ENST00000508708 ZNF354BQ96LW1 612 aa21.92■■□□□ 1.1
CSNK1G3-204ENST00000508708 MTERF1Q99551 399 aaKnown RBP21.92■■□□□ 1.1
CSNK1G3-204ENST00000508708 MAPKAP1Q9BPZ7 522 aa21.92■■□□□ 1.1
CSNK1G3-204ENST00000508708 ZNF717Q9BY31 904 aaPredicted RBP21.92■■□□□ 1.1
CSNK1G3-204ENST00000508708 NOL11Q9H8H0 719 aaKnown RBP21.92■■□□□ 1.1
CSNK1G3-204ENST00000508708 STMN3Q9NZ72 180 aa21.92■■□□□ 1.1
CSNK1G3-204ENST00000508708 PPIEQ9UNP9 301 aaKnown RBP21.92■■□□□ 1.1
CSNK1G3-204ENST00000508708 A8MT66 165 aa21.91■■□□□ 1.1
CSNK1G3-204ENST00000508708 SAP18O00422 153 aaKnown RBP21.91■■□□□ 1.1
CSNK1G3-204ENST00000508708 PLPP1O14494 284 aa21.91■■□□□ 1.1
CSNK1G3-204ENST00000508708 SMIM24O75264 130 aa21.91■■□□□ 1.1
CSNK1G3-204ENST00000508708 PPP2R1BP30154 601 aa21.91■■□□□ 1.1
CSNK1G3-204ENST00000508708 RPS13P62277 151 aaKnown RBP21.91■■□□□ 1.1
CSNK1G3-204ENST00000508708 UBAP2LQ14157 1087 aaKnown RBP21.91■■□□□ 1.1
CSNK1G3-204ENST00000508708 NR6A1Q15406 480 aa21.91■■□□□ 1.1
CSNK1G3-204ENST00000508708 CPSF6Q16630 551 aaKnown RBP eCLIP21.91■■□□□ 1.1
CSNK1G3-204ENST00000508708 CHSY3Q70JA7 882 aa21.91■■□□□ 1.1
CSNK1G3-204ENST00000508708 CYP4X1Q8N118 509 aa21.91■■□□□ 1.1
CSNK1G3-204ENST00000508708 LGI4Q8N135 537 aa21.91■■□□□ 1.1
CSNK1G3-204ENST00000508708 FAM26EQ8N5C1 309 aa21.91■■□□□ 1.1
CSNK1G3-204ENST00000508708 APCDD1LQ8NCL9 501 aa21.91■■□□□ 1.1
CSNK1G3-204ENST00000508708 GRHL3Q8TE85 626 aa21.91■■□□□ 1.1
CSNK1G3-204ENST00000508708 MAGEB10Q96LZ2 347 aaPredicted RBP21.91■■□□□ 1.1
CSNK1G3-204ENST00000508708 CDK15Q96Q40 435 aa21.91■■□□□ 1.1
CSNK1G3-204ENST00000508708 SORBS1Q9BX66 1292 aaKnown RBP21.91■■□□□ 1.1
CSNK1G3-204ENST00000508708 C1QTNF3Q9BXJ4 246 aa21.91■■□□□ 1.1
CSNK1G3-204ENST00000508708 PSMC3IPQ9P2W1 217 aaPredicted RBP21.91■■□□□ 1.1
CSNK1G3-204ENST00000508708 MRPS33Q9Y291 106 aaKnown RBP21.91■■□□□ 1.1
CSNK1G3-204ENST00000508708 SVILO95425 2214 aa21.91■■□□□ 1.1
CSNK1G3-204ENST00000508708 CLDN4O14493 209 aa21.9■■□□□ 1.1
CSNK1G3-204ENST00000508708 CLDN9O95484 217 aa21.9■■□□□ 1.1
CSNK1G3-204ENST00000508708 ETHE1O95571 254 aa21.9■■□□□ 1.1
CSNK1G3-204ENST00000508708 SSR2P43308 183 aa21.9■■□□□ 1.1
CSNK1G3-204ENST00000508708 RCN2Q14257 317 aa21.9■■□□□ 1.1
CSNK1G3-204ENST00000508708 ZRSR2Q15696 482 aaKnown RBP21.9■■□□□ 1.1
CSNK1G3-204ENST00000508708 INAQ16352 499 aa21.9■■□□□ 1.1
CSNK1G3-204ENST00000508708 MEP1AQ16819 746 aa21.9■■□□□ 1.1
CSNK1G3-204ENST00000508708 ARMC10Q8N2F6 343 aa21.9■■□□□ 1.1
CSNK1G3-204ENST00000508708 SLC5A8Q8N695 610 aa21.9■■□□□ 1.1
CSNK1G3-204ENST00000508708 REPS1Q96D71 796 aa21.9■■□□□ 1.1
CSNK1G3-204ENST00000508708 TAAR6Q96RI8 345 aa21.9■■□□□ 1.1
CSNK1G3-204ENST00000508708 NTMT1Q9BV86 223 aa21.9■■□□□ 1.1
CSNK1G3-204ENST00000508708 TMEM216Q9P0N5 145 aa21.9■■□□□ 1.1
CSNK1G3-204ENST00000508708 ZNF223Q9UK11 482 aaPredicted RBP21.9■■□□□ 1.1
CSNK1G3-204ENST00000508708 PPT2Q9UMR5 302 aa21.9■■□□□ 1.1
CSNK1G3-204ENST00000508708 IQANK1A0A1B0GTG1 560 aa21.89■■□□□ 1.09
CSNK1G3-204ENST00000508708 A0A1B0GTL3 188 aa21.89■■□□□ 1.09
CSNK1G3-204ENST00000508708 A8MUA0 341 aa21.89■■□□□ 1.09
CSNK1G3-204ENST00000508708 MYO1DO94832 1006 aa21.89■■□□□ 1.09
CSNK1G3-204ENST00000508708 GPR143P51810 404 aa21.89■■□□□ 1.09
CSNK1G3-204ENST00000508708 ARFIP1P53367 373 aa21.89■■□□□ 1.09
CSNK1G3-204ENST00000508708 SLC13A2Q13183 592 aa21.89■■□□□ 1.09
CSNK1G3-204ENST00000508708 TUBA3CQ13748 450 aa21.89■■□□□ 1.09
CSNK1G3-204ENST00000508708 AP5B1Q2VPB7 878 aa21.89■■□□□ 1.09
CSNK1G3-204ENST00000508708 GGTA1PQ4G0N0 100 aa21.89■■□□□ 1.09
CSNK1G3-204ENST00000508708 OR4C11Q6IEV9 310 aa21.89■■□□□ 1.09
CSNK1G3-204ENST00000508708 TUBA3EQ6PEY2 450 aa21.89■■□□□ 1.09
CSNK1G3-204ENST00000508708 RPS27LQ71UM5 84 aaKnown RBP21.89■■□□□ 1.09
CSNK1G3-204ENST00000508708 CLNKQ7Z7G1 428 aa21.89■■□□□ 1.09
CSNK1G3-204ENST00000508708 LCA5Q86VQ0 697 aa21.89■■□□□ 1.09
CSNK1G3-204ENST00000508708 MDS2Q8NDY4 140 aa21.89■■□□□ 1.09
CSNK1G3-204ENST00000508708 B3GNT7Q8NFL0 401 aa21.89■■□□□ 1.09
CSNK1G3-204ENST00000508708 ZNF483Q8TF39 744 aaPredicted RBP21.89■■□□□ 1.09
CSNK1G3-204ENST00000508708 FAR1Q8WVX9 515 aa21.89■■□□□ 1.09
CSNK1G3-204ENST00000508708 SLX1AQ9BQ83 275 aa21.89■■□□□ 1.09
CSNK1G3-204ENST00000508708 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP21.89■■□□□ 1.092e-8■■■■□ 20.8
CSNK1G3-204ENST00000508708 ADAP2Q9NPF8 381 aa21.89■■□□□ 1.09
CSNK1G3-204ENST00000508708 AGPAT4Q9NRZ5 378 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms